RNA–Protein interactions for RNA: ENST00000392859.7

ARCN1-203, Transcript of archain 1, humanhuman

TSL 2 BASIC

Gene ARCN1, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARCN1-203ENST00000392859 NISCHQ9Y2I1 1504 aa38.13■■■■□ 3.69
ARCN1-203ENST00000392859 CCDC180Q9P1Z9 1646 aa33.35■■■□□ 2.93
ARCN1-203ENST00000392859 ZCCHC6Q5VYS8 1495 aaKnown RBP31.99■■■□□ 2.71
ARCN1-203ENST00000392859 ABCC9O60706 1549 aa31.86■■■□□ 2.69
ARCN1-203ENST00000392859 DCAF8L2P0C7V8 631 aa31.64■■■□□ 2.66
ARCN1-203ENST00000392859 DCAF1Q9Y4B6 1507 aa31.44■■■□□ 2.62
ARCN1-203ENST00000392859 MYO15BQ96JP2 1530 aa31.13■■■□□ 2.57
ARCN1-203ENST00000392859 NACADO15069 1562 aa31.08■■■□□ 2.57
ARCN1-203ENST00000392859 SHROOM4Q9ULL8 1493 aa31.08■■■□□ 2.57
ARCN1-203ENST00000392859 RB1CC1Q8TDY2 1594 aa30.9■■■□□ 2.54
ARCN1-203ENST00000392859 SCRIBQ14160 1630 aa30.76■■■□□ 2.51
ARCN1-203ENST00000392859 UNC13AQ9UPW8 1703 aa30.42■■■□□ 2.46
ARCN1-203ENST00000392859 BICRAQ9NZM4 1560 aa30.05■■■□□ 2.4
ARCN1-203ENST00000392859 PABPN1Q86U42 306 aaKnown RBP eCLIP30.01■■■□□ 2.39
ARCN1-203ENST00000392859 CECR2Q9BXF3 1484 aa29.73■■■□□ 2.35
ARCN1-203ENST00000392859 SUPT5HO00267 1087 aaKnown RBP29.71■■■□□ 2.35
ARCN1-203ENST00000392859 MROH2BQ7Z745 1585 aa29.51■■■□□ 2.31
ARCN1-203ENST00000392859 RSF1Q96T23 1441 aaPredicted RBP29.5■■■□□ 2.31
ARCN1-203ENST00000392859 BAZ1AQ9NRL2 1556 aaPredicted RBP29.44■■■□□ 2.3
ARCN1-203ENST00000392859 SMARCA4P51532 1647 aa29.4■■■□□ 2.3
ARCN1-203ENST00000392859 WIZO95785 1651 aa29.29■■■□□ 2.28
ARCN1-203ENST00000392859 EIF4G1Q04637 1599 aaKnown RBP29.15■■■□□ 2.26
ARCN1-203ENST00000392859 PEG3Q9GZU2 1588 aa28.98■■■□□ 2.23
ARCN1-203ENST00000392859 ATAD2BQ9ULI0 1458 aa28.95■■■□□ 2.22
ARCN1-203ENST00000392859 TOP2AP11388 1531 aaKnown RBP28.9■■■□□ 2.22
ARCN1-203ENST00000392859 SMARCA2P51531 1590 aa28.89■■■□□ 2.22
ARCN1-203ENST00000392859 CC2D2AQ9P2K1 1620 aa28.81■■■□□ 2.2
ARCN1-203ENST00000392859 BAZ1BQ9UIG0 1483 aaKnown RBP28.78■■■□□ 2.2
ARCN1-203ENST00000392859 NCAPD3P42695 1498 aa28.69■■■□□ 2.18
ARCN1-203ENST00000392859 HMGXB3Q12766 1538 aa28.65■■■□□ 2.18
ARCN1-203ENST00000392859 CCDC88BA6NC98 1476 aa28.62■■■□□ 2.17
ARCN1-203ENST00000392859 DNAJC5BQ9UF47 199 aa28.35■■■□□ 2.13
ARCN1-203ENST00000392859 CHIC1Q5VXU3 224 aa28.26■■■□□ 2.11
ARCN1-203ENST00000392859 ABCC8Q09428 1581 aa28.01■■■□□ 2.08
ARCN1-203ENST00000392859 CFTRP13569 1480 aa28.01■■■□□ 2.07
ARCN1-203ENST00000392859 CADPSQ9ULU8 1353 aa27.95■■■□□ 2.06
ARCN1-203ENST00000392859 NESP48681 1621 aa27.92■■■□□ 2.06
ARCN1-203ENST00000392859 PRDM2Q13029 1718 aa27.92■■■□□ 2.06
ARCN1-203ENST00000392859 TRIM41Q8WV44 630 aa27.87■■■□□ 2.05
ARCN1-203ENST00000392859 LAMC3Q9Y6N6 1575 aa27.78■■■□□ 2.04
ARCN1-203ENST00000392859 WRNQ14191 1432 aaPredicted RBP eCLIP27.76■■■□□ 2.03
ARCN1-203ENST00000392859 SYNJ1O43426 1573 aa27.74■■■□□ 2.03
ARCN1-203ENST00000392859 FANCD2Q9BXW9 1451 aa27.69■■■□□ 2.02
ARCN1-203ENST00000392859 CUX1P39880 1505 aa27.6■■■□□ 2.01
ARCN1-203ENST00000392859 KIF21AQ7Z4S6 1674 aa27.59■■■□□ 2.01
ARCN1-203ENST00000392859 TOP2BQ02880 1626 aa27.58■■■□□ 2
ARCN1-203ENST00000392859 BIVM-ERCC5R4GMW8 1640 aa27.56■■■□□ 2
ARCN1-203ENST00000392859 PDS5BQ9NTI5 1447 aa27.54■■■□□ 2
ARCN1-203ENST00000392859 CEP164Q9UPV0 1460 aa27.53■■■□□ 2
ARCN1-203ENST00000392859 FAM9AQ8IZU1 332 aaPredicted RBP27.47■■□□□ 1.99
ARCN1-203ENST00000392859 URB2Q14146 1524 aaKnown RBP27.39■■□□□ 1.98
ARCN1-203ENST00000392859 SOGA1O94964 1423 aa27.39■■□□□ 1.98
ARCN1-203ENST00000392859 DNMBPQ6XZF7 1577 aa27.39■■□□□ 1.98
ARCN1-203ENST00000392859 TOPBP1Q92547 1522 aa27.38■■□□□ 1.97
ARCN1-203ENST00000392859 RUSC2Q8N2Y8 1516 aa27.34■■□□□ 1.97
ARCN1-203ENST00000392859 FGD5Q6ZNL6 1462 aa27.33■■□□□ 1.97
ARCN1-203ENST00000392859 ERCC6Q03468 1493 aa27.29■■□□□ 1.96
ARCN1-203ENST00000392859 MRC2Q9UBG0 1479 aa27.26■■□□□ 1.95
ARCN1-203ENST00000392859 LOC105371045A0A1W2PR82 267 aa27.24■■□□□ 1.95
ARCN1-203ENST00000392859 POLA1P09884 1462 aaPredicted RBP27.22■■□□□ 1.95
ARCN1-203ENST00000392859 RAD54L2Q9Y4B4 1467 aa27.18■■□□□ 1.94
ARCN1-203ENST00000392859 EHMT2Q96KQ7 1210 aa27.18■■□□□ 1.94
ARCN1-203ENST00000392859 THOC2Q8NI27 1593 aaKnown RBP27.15■■□□□ 1.94
ARCN1-203ENST00000392859 EEA1Q15075 1411 aa27.14■■□□□ 1.94
ARCN1-203ENST00000392859 WDR62O43379 1518 aa27.13■■□□□ 1.93
ARCN1-203ENST00000392859 CUX2O14529 1486 aa27.1■■□□□ 1.93
ARCN1-203ENST00000392859 CSRNP3Q8WYN3 585 aa27.07■■□□□ 1.92
ARCN1-203ENST00000392859 KIF27Q86VH2 1401 aa27.05■■□□□ 1.92
ARCN1-203ENST00000392859 WDR97A6NE52 1622 aa27.04■■□□□ 1.92
ARCN1-203ENST00000392859 ABCA10Q8WWZ4 1543 aa27.03■■□□□ 1.92
ARCN1-203ENST00000392859 TARBP1Q13395 1621 aaKnown RBP27■■□□□ 1.91
ARCN1-203ENST00000392859 TDRD9Q8NDG6 1382 aaKnown RBP26.91■■□□□ 1.9
ARCN1-203ENST00000392859 KIF21BO75037 1637 aa26.9■■□□□ 1.9
ARCN1-203ENST00000392859 ABCA5Q8WWZ7 1642 aa26.89■■□□□ 1.89
ARCN1-203ENST00000392859 IFT140Q96RY7 1462 aa26.85■■□□□ 1.89
ARCN1-203ENST00000392859 IGF1RP08069 1367 aa26.85■■□□□ 1.89
ARCN1-203ENST00000392859 RAPGEF2Q9Y4G8 1499 aa26.85■■□□□ 1.89
ARCN1-203ENST00000392859 GOLGA3Q08378 1498 aa26.83■■□□□ 1.89
ARCN1-203ENST00000392859 ZNF608Q9ULD9 1512 aaPredicted RBP26.83■■□□□ 1.88
ARCN1-203ENST00000392859 PRXQ9BXM0 1461 aa26.82■■□□□ 1.88
ARCN1-203ENST00000392859 GAPVD1Q14C86 1478 aa26.8■■□□□ 1.88
ARCN1-203ENST00000392859 AQRO60306 1485 aaKnown RBP eCLIP26.79■■□□□ 1.882e-6■■■■□ 26.7
ARCN1-203ENST00000392859 UBTFP17480 764 aaKnown RBP26.75■■□□□ 1.87
ARCN1-203ENST00000392859 PBRM1Q86U86 1689 aa26.75■■□□□ 1.87
ARCN1-203ENST00000392859 ERICH3Q5RHP9 1530 aa26.73■■□□□ 1.87
ARCN1-203ENST00000392859 EIF4G3O43432 1585 aaKnown RBP26.72■■□□□ 1.87
ARCN1-203ENST00000392859 CARMIL1Q5VZK9 1371 aa26.72■■□□□ 1.87
ARCN1-203ENST00000392859 CUL7Q14999 1698 aa26.68■■□□□ 1.86
ARCN1-203ENST00000392859 TNIKQ9UKE5 1360 aa26.67■■□□□ 1.86
ARCN1-203ENST00000392859 GRIN2BQ13224 1484 aa26.62■■□□□ 1.85
ARCN1-203ENST00000392859 CEP162Q5TB80 1403 aa26.58■■□□□ 1.85
ARCN1-203ENST00000392859 ADAMTS12P58397 1594 aa26.56■■□□□ 1.84
ARCN1-203ENST00000392859 SNAPC4Q5SXM2 1469 aa26.53■■□□□ 1.84
ARCN1-203ENST00000392859 RANGAP1P46060 587 aaPredicted RBP26.52■■□□□ 1.84
ARCN1-203ENST00000392859 FHAD1B1AJZ9 1412 aa26.49■■□□□ 1.83
ARCN1-203ENST00000392859 CLIP1P30622 1438 aa26.41■■□□□ 1.82
ARCN1-203ENST00000392859 MAGI1Q96QZ7 1491 aaPredicted RBP26.41■■□□□ 1.82
ARCN1-203ENST00000392859 CTTNBP2Q8WZ74 1663 aa26.4■■□□□ 1.82
ARCN1-203ENST00000392859 SYNJ2O15056 1496 aa26.32■■□□□ 1.8
ARCN1-203ENST00000392859 GRIN2AQ12879 1464 aa26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms