RNA–Protein interactions for RNA: ENST00000555181.5

GSKIP-205, Transcript of GSK3B interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GSKIP, Length 2,218 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSKIP-205ENST00000555181 NISCHQ9Y2I1 1504 aa38.11■■■■□ 3.69
GSKIP-205ENST00000555181 CCDC180Q9P1Z9 1646 aa33.24■■■□□ 2.91
GSKIP-205ENST00000555181 ABCC9O60706 1549 aa32.11■■■□□ 2.73
GSKIP-205ENST00000555181 ZCCHC6Q5VYS8 1495 aaKnown RBP31.92■■■□□ 2.7
GSKIP-205ENST00000555181 DCAF8L2P0C7V8 631 aa31.88■■■□□ 2.69
GSKIP-205ENST00000555181 DCAF1Q9Y4B6 1507 aa31.33■■■□□ 2.61
GSKIP-205ENST00000555181 SHROOM4Q9ULL8 1493 aa31.13■■■□□ 2.57
GSKIP-205ENST00000555181 NACADO15069 1562 aa31.09■■■□□ 2.57
GSKIP-205ENST00000555181 MYO15BQ96JP2 1530 aa31.07■■■□□ 2.56
GSKIP-205ENST00000555181 RB1CC1Q8TDY2 1594 aa30.95■■■□□ 2.54
GSKIP-205ENST00000555181 SCRIBQ14160 1630 aa30.78■■■□□ 2.52
GSKIP-205ENST00000555181 UNC13AQ9UPW8 1703 aa30.42■■■□□ 2.46
GSKIP-205ENST00000555181 PABPN1Q86U42 306 aaKnown RBP eCLIP30.31■■■□□ 2.44
GSKIP-205ENST00000555181 BICRAQ9NZM4 1560 aa30.16■■■□□ 2.42
GSKIP-205ENST00000555181 CECR2Q9BXF3 1484 aa29.81■■■□□ 2.36
GSKIP-205ENST00000555181 SUPT5HO00267 1087 aaKnown RBP29.71■■■□□ 2.35
GSKIP-205ENST00000555181 MROH2BQ7Z745 1585 aa29.53■■■□□ 2.32
GSKIP-205ENST00000555181 RSF1Q96T23 1441 aaPredicted RBP29.49■■■□□ 2.31
GSKIP-205ENST00000555181 BAZ1AQ9NRL2 1556 aaPredicted RBP29.4■■■□□ 2.3
GSKIP-205ENST00000555181 SMARCA4P51532 1647 aa29.37■■■□□ 2.29
GSKIP-205ENST00000555181 WIZO95785 1651 aa29.26■■■□□ 2.28
GSKIP-205ENST00000555181 EIF4G1Q04637 1599 aaKnown RBP29.26■■■□□ 2.27
GSKIP-205ENST00000555181 ATAD2BQ9ULI0 1458 aa29.02■■■□□ 2.24
GSKIP-205ENST00000555181 CC2D2AQ9P2K1 1620 aa28.95■■■□□ 2.23
GSKIP-205ENST00000555181 PEG3Q9GZU2 1588 aa28.94■■■□□ 2.22
GSKIP-205ENST00000555181 SMARCA2P51531 1590 aa28.88■■■□□ 2.21
GSKIP-205ENST00000555181 DNAJC5BQ9UF47 199 aa28.83■■■□□ 2.21
GSKIP-205ENST00000555181 BAZ1BQ9UIG0 1483 aaKnown RBP28.82■■■□□ 2.2
GSKIP-205ENST00000555181 TOP2AP11388 1531 aaKnown RBP28.82■■■□□ 2.2
GSKIP-205ENST00000555181 NCAPD3P42695 1498 aa28.77■■■□□ 2.2
GSKIP-205ENST00000555181 HMGXB3Q12766 1538 aa28.65■■■□□ 2.18
GSKIP-205ENST00000555181 CCDC88BA6NC98 1476 aa28.63■■■□□ 2.17
GSKIP-205ENST00000555181 CHIC1Q5VXU3 224 aa28.13■■■□□ 2.09
GSKIP-205ENST00000555181 NESP48681 1621 aa28.11■■■□□ 2.09
GSKIP-205ENST00000555181 CADPSQ9ULU8 1353 aa28.06■■■□□ 2.08
GSKIP-205ENST00000555181 CFTRP13569 1480 aa28.06■■■□□ 2.08
GSKIP-205ENST00000555181 ABCC8Q09428 1581 aa27.99■■■□□ 2.07
GSKIP-205ENST00000555181 TRIM41Q8WV44 630 aa27.83■■■□□ 2.05
GSKIP-205ENST00000555181 LAMC3Q9Y6N6 1575 aa27.81■■■□□ 2.04
GSKIP-205ENST00000555181 FANCD2Q9BXW9 1451 aa27.77■■■□□ 2.04
GSKIP-205ENST00000555181 PRDM2Q13029 1718 aa27.75■■■□□ 2.03
GSKIP-205ENST00000555181 WRNQ14191 1432 aaPredicted RBP eCLIP27.73■■■□□ 2.03
GSKIP-205ENST00000555181 SYNJ1O43426 1573 aa27.68■■■□□ 2.02
GSKIP-205ENST00000555181 PDS5BQ9NTI5 1447 aa27.65■■■□□ 2.02
GSKIP-205ENST00000555181 KIF21AQ7Z4S6 1674 aa27.64■■■□□ 2.01
GSKIP-205ENST00000555181 CUX1P39880 1505 aa27.61■■■□□ 2.01
GSKIP-205ENST00000555181 CEP164Q9UPV0 1460 aa27.6■■■□□ 2.01
GSKIP-205ENST00000555181 FAM9AQ8IZU1 332 aaPredicted RBP27.5■■□□□ 1.99
GSKIP-205ENST00000555181 TOP2BQ02880 1626 aa27.49■■□□□ 1.99
GSKIP-205ENST00000555181 ERCC6Q03468 1493 aa27.49■■□□□ 1.99
GSKIP-205ENST00000555181 URB2Q14146 1524 aaKnown RBP27.49■■□□□ 1.99
GSKIP-205ENST00000555181 BIVM-ERCC5R4GMW8 1640 aa27.43■■□□□ 1.98
GSKIP-205ENST00000555181 TOPBP1Q92547 1522 aa27.42■■□□□ 1.98
GSKIP-205ENST00000555181 SOGA1O94964 1423 aa27.39■■□□□ 1.98
GSKIP-205ENST00000555181 DNMBPQ6XZF7 1577 aa27.37■■□□□ 1.97
GSKIP-205ENST00000555181 FGD5Q6ZNL6 1462 aa27.36■■□□□ 1.97
GSKIP-205ENST00000555181 RUSC2Q8N2Y8 1516 aa27.35■■□□□ 1.97
GSKIP-205ENST00000555181 MRC2Q9UBG0 1479 aa27.34■■□□□ 1.97
GSKIP-205ENST00000555181 POLA1P09884 1462 aaPredicted RBP27.29■■□□□ 1.96
GSKIP-205ENST00000555181 RAD54L2Q9Y4B4 1467 aa27.28■■□□□ 1.96
GSKIP-205ENST00000555181 EHMT2Q96KQ7 1210 aa27.28■■□□□ 1.96
GSKIP-205ENST00000555181 THOC2Q8NI27 1593 aaKnown RBP27.24■■□□□ 1.95
GSKIP-205ENST00000555181 WDR62O43379 1518 aa27.2■■□□□ 1.94
GSKIP-205ENST00000555181 LOC105371045A0A1W2PR82 267 aa27.19■■□□□ 1.94
GSKIP-205ENST00000555181 CUX2O14529 1486 aa27.13■■□□□ 1.93
GSKIP-205ENST00000555181 TDRD9Q8NDG6 1382 aaKnown RBP27.07■■□□□ 1.92
GSKIP-205ENST00000555181 CSRNP3Q8WYN3 585 aa27.04■■□□□ 1.92
GSKIP-205ENST00000555181 ABCA10Q8WWZ4 1543 aa27.03■■□□□ 1.92
GSKIP-205ENST00000555181 TARBP1Q13395 1621 aaKnown RBP27.02■■□□□ 1.92
GSKIP-205ENST00000555181 KIF27Q86VH2 1401 aa27.01■■□□□ 1.92
GSKIP-205ENST00000555181 ZNF608Q9ULD9 1512 aaPredicted RBP26.98■■□□□ 1.91
GSKIP-205ENST00000555181 WDR97A6NE52 1622 aa26.95■■□□□ 1.91
GSKIP-205ENST00000555181 EEA1Q15075 1411 aa26.95■■□□□ 1.9
GSKIP-205ENST00000555181 AQRO60306 1485 aaKnown RBP eCLIP26.95■■□□□ 1.9
GSKIP-205ENST00000555181 IFT140Q96RY7 1462 aa26.91■■□□□ 1.9
GSKIP-205ENST00000555181 IGF1RP08069 1367 aa26.9■■□□□ 1.9
GSKIP-205ENST00000555181 GAPVD1Q14C86 1478 aa26.86■■□□□ 1.89
GSKIP-205ENST00000555181 ABCA5Q8WWZ7 1642 aa26.84■■□□□ 1.89
GSKIP-205ENST00000555181 RAPGEF2Q9Y4G8 1499 aa26.81■■□□□ 1.88
GSKIP-205ENST00000555181 PRXQ9BXM0 1461 aa26.76■■□□□ 1.87
GSKIP-205ENST00000555181 EIF4G3O43432 1585 aaKnown RBP26.76■■□□□ 1.87
GSKIP-205ENST00000555181 CARMIL1Q5VZK9 1371 aa26.74■■□□□ 1.87
GSKIP-205ENST00000555181 UBTFP17480 764 aaKnown RBP26.73■■□□□ 1.87
GSKIP-205ENST00000555181 KIF21BO75037 1637 aa26.69■■□□□ 1.86
GSKIP-205ENST00000555181 GOLGA3Q08378 1498 aa26.68■■□□□ 1.86
GSKIP-205ENST00000555181 PBRM1Q86U86 1689 aa26.68■■□□□ 1.86
GSKIP-205ENST00000555181 ERICH3Q5RHP9 1530 aa26.66■■□□□ 1.86
GSKIP-205ENST00000555181 GRIN2BQ13224 1484 aa26.66■■□□□ 1.86
GSKIP-205ENST00000555181 RANGAP1P46060 587 aaPredicted RBP26.63■■□□□ 1.85
GSKIP-205ENST00000555181 SNAPC4Q5SXM2 1469 aa26.61■■□□□ 1.85
GSKIP-205ENST00000555181 CUL7Q14999 1698 aa26.56■■□□□ 1.84
GSKIP-205ENST00000555181 FBLN2P98095 1184 aa26.54■■□□□ 1.84
GSKIP-205ENST00000555181 ADAMTS12P58397 1594 aa26.53■■□□□ 1.84
GSKIP-205ENST00000555181 TNIKQ9UKE5 1360 aa26.52■■□□□ 1.84
GSKIP-205ENST00000555181 FHAD1B1AJZ9 1412 aa26.51■■□□□ 1.83
GSKIP-205ENST00000555181 CEP162Q5TB80 1403 aa26.45■■□□□ 1.82
GSKIP-205ENST00000555181 MAGI1Q96QZ7 1491 aaPredicted RBP26.44■■□□□ 1.82
GSKIP-205ENST00000555181 CHMP7Q8WUX9 453 aaPredicted RBP26.44■■□□□ 1.82
GSKIP-205ENST00000555181 SYNJ2O15056 1496 aa26.39■■□□□ 1.81
GSKIP-205ENST00000555181 GRIN2AQ12879 1464 aa26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms