RNA–Protein interactions for RNA: ENST00000330368.2

ACTRT3-201, Transcript of actin related protein T3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTRT3, Length 2,005 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTRT3-201ENST00000330368 NISCHQ9Y2I1 1504 aa37.83■■■■□ 3.65
ACTRT3-201ENST00000330368 CCDC180Q9P1Z9 1646 aa32.98■■■□□ 2.87
ACTRT3-201ENST00000330368 ZCCHC6Q5VYS8 1495 aaKnown RBP31.73■■■□□ 2.67
ACTRT3-201ENST00000330368 ABCC9O60706 1549 aa31.61■■■□□ 2.65
ACTRT3-201ENST00000330368 DCAF8L2P0C7V8 631 aa31.44■■■□□ 2.62
ACTRT3-201ENST00000330368 DCAF1Q9Y4B6 1507 aa31.16■■■□□ 2.58
ACTRT3-201ENST00000330368 SHROOM4Q9ULL8 1493 aa30.89■■■□□ 2.53
ACTRT3-201ENST00000330368 MYO15BQ96JP2 1530 aa30.85■■■□□ 2.53
ACTRT3-201ENST00000330368 NACADO15069 1562 aa30.78■■■□□ 2.52
ACTRT3-201ENST00000330368 RB1CC1Q8TDY2 1594 aa30.59■■■□□ 2.49
ACTRT3-201ENST00000330368 SCRIBQ14160 1630 aa30.48■■■□□ 2.47
ACTRT3-201ENST00000330368 UNC13AQ9UPW8 1703 aa30.09■■■□□ 2.41
ACTRT3-201ENST00000330368 SUPT5HO00267 1087 aaKnown RBP29.86■■■□□ 2.37
ACTRT3-201ENST00000330368 PABPN1Q86U42 306 aaKnown RBP eCLIP29.83■■■□□ 2.37
ACTRT3-201ENST00000330368 BICRAQ9NZM4 1560 aa29.81■■■□□ 2.36
ACTRT3-201ENST00000330368 CECR2Q9BXF3 1484 aa29.54■■■□□ 2.32
ACTRT3-201ENST00000330368 RSF1Q96T23 1441 aaPredicted RBP29.31■■■□□ 2.28
ACTRT3-201ENST00000330368 MROH2BQ7Z745 1585 aa29.3■■■□□ 2.28
ACTRT3-201ENST00000330368 BAZ1AQ9NRL2 1556 aaPredicted RBP29.17■■■□□ 2.26
ACTRT3-201ENST00000330368 SMARCA4P51532 1647 aa29.13■■■□□ 2.25
ACTRT3-201ENST00000330368 WIZO95785 1651 aa29.04■■■□□ 2.24
ACTRT3-201ENST00000330368 CHIC1Q5VXU3 224 aa28.98■■■□□ 2.23
ACTRT3-201ENST00000330368 EIF4G1Q04637 1599 aaKnown RBP28.89■■■□□ 2.22
ACTRT3-201ENST00000330368 PEG3Q9GZU2 1588 aa28.73■■■□□ 2.19
ACTRT3-201ENST00000330368 ATAD2BQ9ULI0 1458 aa28.73■■■□□ 2.19
ACTRT3-201ENST00000330368 TOP2AP11388 1531 aaKnown RBP28.64■■■□□ 2.17
ACTRT3-201ENST00000330368 SMARCA2P51531 1590 aa28.6■■■□□ 2.17
ACTRT3-201ENST00000330368 CC2D2AQ9P2K1 1620 aa28.54■■■□□ 2.16
ACTRT3-201ENST00000330368 BAZ1BQ9UIG0 1483 aaKnown RBP28.52■■■□□ 2.16
ACTRT3-201ENST00000330368 NCAPD3P42695 1498 aa28.47■■■□□ 2.15
ACTRT3-201ENST00000330368 CCDC88BA6NC98 1476 aa28.42■■■□□ 2.14
ACTRT3-201ENST00000330368 HMGXB3Q12766 1538 aa28.37■■■□□ 2.13
ACTRT3-201ENST00000330368 DNAJC5BQ9UF47 199 aa28.22■■■□□ 2.11
ACTRT3-201ENST00000330368 LOC105371045A0A1W2PR82 267 aa28.06■■■□□ 2.08
ACTRT3-201ENST00000330368 TRIM41Q8WV44 630 aa27.9■■■□□ 2.06
ACTRT3-201ENST00000330368 ABCC8Q09428 1581 aa27.81■■■□□ 2.04
ACTRT3-201ENST00000330368 CFTRP13569 1480 aa27.8■■■□□ 2.04
ACTRT3-201ENST00000330368 CADPSQ9ULU8 1353 aa27.75■■■□□ 2.03
ACTRT3-201ENST00000330368 NESP48681 1621 aa27.72■■■□□ 2.03
ACTRT3-201ENST00000330368 PCGF6Q9BYE7 350 aa27.67■■■□□ 2.02
ACTRT3-201ENST00000330368 FAM9AQ8IZU1 332 aaPredicted RBP27.57■■■□□ 2
ACTRT3-201ENST00000330368 PRDM2Q13029 1718 aa27.55■■■□□ 2
ACTRT3-201ENST00000330368 WRNQ14191 1432 aaPredicted RBP eCLIP27.55■■■□□ 2
ACTRT3-201ENST00000330368 HRCP23327 699 aa27.51■■■□□ 2
ACTRT3-201ENST00000330368 SYNJ1O43426 1573 aa27.51■■■□□ 2
ACTRT3-201ENST00000330368 LAMC3Q9Y6N6 1575 aa27.5■■□□□ 1.99
ACTRT3-201ENST00000330368 FANCD2Q9BXW9 1451 aa27.46■■□□□ 1.99
ACTRT3-201ENST00000330368 CUX1P39880 1505 aa27.39■■□□□ 1.98
ACTRT3-201ENST00000330368 TOP2BQ02880 1626 aa27.33■■□□□ 1.97
ACTRT3-201ENST00000330368 TRIM26Q12899 539 aaPredicted RBP27.3■■□□□ 1.96
ACTRT3-201ENST00000330368 PDS5BQ9NTI5 1447 aa27.3■■□□□ 1.96
ACTRT3-201ENST00000330368 KIF21AQ7Z4S6 1674 aa27.3■■□□□ 1.96
ACTRT3-201ENST00000330368 BIVM-ERCC5R4GMW8 1640 aa27.29■■□□□ 1.96
ACTRT3-201ENST00000330368 CEP164Q9UPV0 1460 aa27.27■■□□□ 1.96
ACTRT3-201ENST00000330368 EHMT2Q96KQ7 1210 aa27.27■■□□□ 1.96
ACTRT3-201ENST00000330368 SOGA1O94964 1423 aa27.24■■□□□ 1.95
ACTRT3-201ENST00000330368 RUSC2Q8N2Y8 1516 aa27.2■■□□□ 1.94
ACTRT3-201ENST00000330368 URB2Q14146 1524 aaKnown RBP27.18■■□□□ 1.94
ACTRT3-201ENST00000330368 TOPBP1Q92547 1522 aa27.15■■□□□ 1.94
ACTRT3-201ENST00000330368 DNMBPQ6XZF7 1577 aa27.13■■□□□ 1.93
ACTRT3-201ENST00000330368 FGD5Q6ZNL6 1462 aa27.1■■□□□ 1.93
ACTRT3-201ENST00000330368 ERCC6Q03468 1493 aa27.03■■□□□ 1.92
ACTRT3-201ENST00000330368 POLA1P09884 1462 aaPredicted RBP27.02■■□□□ 1.92
ACTRT3-201ENST00000330368 MRC2Q9UBG0 1479 aa27■■□□□ 1.91
ACTRT3-201ENST00000330368 RAD54L2Q9Y4B4 1467 aa27■■□□□ 1.91
ACTRT3-201ENST00000330368 PPARGC1BQ86YN6 1023 aaKnown RBP26.92■■□□□ 1.9
ACTRT3-201ENST00000330368 CSRNP3Q8WYN3 585 aa26.9■■□□□ 1.9
ACTRT3-201ENST00000330368 THOC2Q8NI27 1593 aaKnown RBP26.89■■□□□ 1.9
ACTRT3-201ENST00000330368 EEA1Q15075 1411 aa26.89■■□□□ 1.9
ACTRT3-201ENST00000330368 CUX2O14529 1486 aa26.88■■□□□ 1.89
ACTRT3-201ENST00000330368 WDR62O43379 1518 aa26.88■■□□□ 1.89
ACTRT3-201ENST00000330368 KIF27Q86VH2 1401 aa26.82■■□□□ 1.88
ACTRT3-201ENST00000330368 ABCA10Q8WWZ4 1543 aa26.8■■□□□ 1.88
ACTRT3-201ENST00000330368 TARBP1Q13395 1621 aaKnown RBP26.76■■□□□ 1.87
ACTRT3-201ENST00000330368 WDR97A6NE52 1622 aa26.76■■□□□ 1.87
ACTRT3-201ENST00000330368 TDRD9Q8NDG6 1382 aaKnown RBP26.74■■□□□ 1.87
ACTRT3-201ENST00000330368 TNIKQ9UKE5 1360 aa26.71■■□□□ 1.87
ACTRT3-201ENST00000330368 IGF1RP08069 1367 aa26.7■■□□□ 1.86
ACTRT3-201ENST00000330368 RAPGEF2Q9Y4G8 1499 aa26.67■■□□□ 1.86
ACTRT3-201ENST00000330368 CEP162Q5TB80 1403 aa26.66■■□□□ 1.86
ACTRT3-201ENST00000330368 PRXQ9BXM0 1461 aa26.64■■□□□ 1.86
ACTRT3-201ENST00000330368 KIF21BO75037 1637 aa26.64■■□□□ 1.85
ACTRT3-201ENST00000330368 ZNF608Q9ULD9 1512 aaPredicted RBP26.64■■□□□ 1.85
ACTRT3-201ENST00000330368 ABCA5Q8WWZ7 1642 aa26.63■■□□□ 1.85
ACTRT3-201ENST00000330368 IFT140Q96RY7 1462 aa26.61■■□□□ 1.85
ACTRT3-201ENST00000330368 AQRO60306 1485 aaKnown RBP eCLIP26.61■■□□□ 1.85
ACTRT3-201ENST00000330368 GOLGA3Q08378 1498 aa26.6■■□□□ 1.85
ACTRT3-201ENST00000330368 UBTFP17480 764 aaKnown RBP26.6■■□□□ 1.85
ACTRT3-201ENST00000330368 GAPVD1Q14C86 1478 aa26.58■■□□□ 1.85
ACTRT3-201ENST00000330368 ZEB1P37275 1124 aaPredicted RBP26.57■■□□□ 1.84
ACTRT3-201ENST00000330368 CARMIL1Q5VZK9 1371 aa26.52■■□□□ 1.84
ACTRT3-201ENST00000330368 ERICH3Q5RHP9 1530 aa26.48■■□□□ 1.83
ACTRT3-201ENST00000330368 EIF4G3O43432 1585 aaKnown RBP26.45■■□□□ 1.83
ACTRT3-201ENST00000330368 PBRM1Q86U86 1689 aa26.44■■□□□ 1.82
ACTRT3-201ENST00000330368 CUL7Q14999 1698 aa26.39■■□□□ 1.81
ACTRT3-201ENST00000330368 GRIN2BQ13224 1484 aa26.38■■□□□ 1.81
ACTRT3-201ENST00000330368 RANGAP1P46060 587 aaPredicted RBP26.36■■□□□ 1.81
ACTRT3-201ENST00000330368 SNAPC4Q5SXM2 1469 aa26.31■■□□□ 1.8
ACTRT3-201ENST00000330368 TTBK1Q5TCY1 1321 aaPredicted RBP26.3■■□□□ 1.8
ACTRT3-201ENST00000330368 ADAMTS12P58397 1594 aa26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms