RNA–Protein interactions for RNA: ENST00000405796.1

TUBB3P1-201, Transcript of tubulin beta 3 class III pseudogene 1, humanhuman

BASIC

Gene TUBB3P1, Length 1,332 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3P1-201ENST00000405796 NISCHQ9Y2I1 1504 aa40.17■■■■■ 4.02
TUBB3P1-201ENST00000405796 CCDC180Q9P1Z9 1646 aa35.86■■■■□ 3.33
TUBB3P1-201ENST00000405796 ABCC9O60706 1549 aa35.62■■■■□ 3.29
TUBB3P1-201ENST00000405796 RB1CC1Q8TDY2 1594 aa34.03■■■■□ 3.04
TUBB3P1-201ENST00000405796 DCAF8L2P0C7V8 631 aa33.9■■■■□ 3.02
TUBB3P1-201ENST00000405796 NACADO15069 1562 aa33.86■■■■□ 3.01
TUBB3P1-201ENST00000405796 MYO15BQ96JP2 1530 aa33.48■■■□□ 2.95
TUBB3P1-201ENST00000405796 ZCCHC6Q5VYS8 1495 aaKnown RBP33.34■■■□□ 2.93
TUBB3P1-201ENST00000405796 PABPN1Q86U42 306 aaKnown RBP eCLIP33.27■■■□□ 2.92
TUBB3P1-201ENST00000405796 DCAF1Q9Y4B6 1507 aa33.18■■■□□ 2.9
TUBB3P1-201ENST00000405796 UNC13AQ9UPW8 1703 aa33.17■■■□□ 2.9
TUBB3P1-201ENST00000405796 DNAJC5BQ9UF47 199 aa33.14■■■□□ 2.9
TUBB3P1-201ENST00000405796 BICRAQ9NZM4 1560 aa32.98■■■□□ 2.87
TUBB3P1-201ENST00000405796 SCRIBQ14160 1630 aa32.74■■■□□ 2.83
TUBB3P1-201ENST00000405796 SHROOM4Q9ULL8 1493 aa32.59■■■□□ 2.81
TUBB3P1-201ENST00000405796 EIF4G1Q04637 1599 aaKnown RBP32.17■■■□□ 2.74
TUBB3P1-201ENST00000405796 CC2D2AQ9P2K1 1620 aa32.16■■■□□ 2.74
TUBB3P1-201ENST00000405796 CECR2Q9BXF3 1484 aa32.06■■■□□ 2.72
TUBB3P1-201ENST00000405796 NCAPD3P42695 1498 aa31.28■■■□□ 2.6
TUBB3P1-201ENST00000405796 SMARCA4P51532 1647 aa31.24■■■□□ 2.59
TUBB3P1-201ENST00000405796 ATAD2BQ9ULI0 1458 aa31.23■■■□□ 2.59
TUBB3P1-201ENST00000405796 BAZ1AQ9NRL2 1556 aaPredicted RBP31.16■■■□□ 2.58
TUBB3P1-201ENST00000405796 SMARCA2P51531 1590 aa31.15■■■□□ 2.58
TUBB3P1-201ENST00000405796 HMGXB3Q12766 1538 aa31.04■■■□□ 2.56
TUBB3P1-201ENST00000405796 MROH2BQ7Z745 1585 aa30.96■■■□□ 2.55
TUBB3P1-201ENST00000405796 BAZ1BQ9UIG0 1483 aaKnown RBP30.95■■■□□ 2.55
TUBB3P1-201ENST00000405796 PEG3Q9GZU2 1588 aa30.93■■■□□ 2.54
TUBB3P1-201ENST00000405796 ERCC6Q03468 1493 aa30.75■■■□□ 2.51
TUBB3P1-201ENST00000405796 NESP48681 1621 aa30.68■■■□□ 2.5
TUBB3P1-201ENST00000405796 WIZO95785 1651 aa30.58■■■□□ 2.49
TUBB3P1-201ENST00000405796 CUX2O14529 1486 aa30.55■■■□□ 2.48
TUBB3P1-201ENST00000405796 LAMC3Q9Y6N6 1575 aa30.5■■■□□ 2.47
TUBB3P1-201ENST00000405796 RSF1Q96T23 1441 aaPredicted RBP30.45■■■□□ 2.47
TUBB3P1-201ENST00000405796 PDS5BQ9NTI5 1447 aa30.37■■■□□ 2.45
TUBB3P1-201ENST00000405796 CADPSQ9ULU8 1353 aa30.36■■■□□ 2.45
TUBB3P1-201ENST00000405796 KIF21AQ7Z4S6 1674 aa30.25■■■□□ 2.43
TUBB3P1-201ENST00000405796 THOC2Q8NI27 1593 aaKnown RBP30.25■■■□□ 2.43
TUBB3P1-201ENST00000405796 TOP2AP11388 1531 aaKnown RBP30.23■■■□□ 2.43
TUBB3P1-201ENST00000405796 DNAJC5Q9H3Z4 198 aa30.22■■■□□ 2.43
TUBB3P1-201ENST00000405796 CFTRP13569 1480 aa30.06■■■□□ 2.4
TUBB3P1-201ENST00000405796 MRC2Q9UBG0 1479 aa30.05■■■□□ 2.4
TUBB3P1-201ENST00000405796 FANCD2Q9BXW9 1451 aa30■■■□□ 2.39
TUBB3P1-201ENST00000405796 CEP164Q9UPV0 1460 aa30■■■□□ 2.39
TUBB3P1-201ENST00000405796 WDR62O43379 1518 aa29.94■■■□□ 2.38
TUBB3P1-201ENST00000405796 CCDC88BA6NC98 1476 aa29.91■■■□□ 2.38
TUBB3P1-201ENST00000405796 URB2Q14146 1524 aaKnown RBP29.71■■■□□ 2.35
TUBB3P1-201ENST00000405796 PRDM2Q13029 1718 aa29.7■■■□□ 2.35
TUBB3P1-201ENST00000405796 TOPBP1Q92547 1522 aa29.45■■■□□ 2.31
TUBB3P1-201ENST00000405796 ABCC8Q09428 1581 aa29.44■■■□□ 2.3
TUBB3P1-201ENST00000405796 SUPT5HO00267 1087 aaKnown RBP29.43■■■□□ 2.3
TUBB3P1-201ENST00000405796 IFT140Q96RY7 1462 aa29.4■■■□□ 2.3
TUBB3P1-201ENST00000405796 DNMBPQ6XZF7 1577 aa29.37■■■□□ 2.29
TUBB3P1-201ENST00000405796 ZNF608Q9ULD9 1512 aaPredicted RBP29.31■■■□□ 2.28
TUBB3P1-201ENST00000405796 OSCARQ8IYS5 282 aa29.29■■■□□ 2.28
TUBB3P1-201ENST00000405796 POLA1P09884 1462 aaPredicted RBP29.18■■■□□ 2.26
TUBB3P1-201ENST00000405796 TARBP1Q13395 1621 aaKnown RBP29.14■■■□□ 2.26
TUBB3P1-201ENST00000405796 EIF4G3O43432 1585 aaKnown RBP29.13■■■□□ 2.25
TUBB3P1-201ENST00000405796 AQRO60306 1485 aaKnown RBP eCLIP29.11■■■□□ 2.25
TUBB3P1-201ENST00000405796 SOGA1O94964 1423 aa29.09■■■□□ 2.25
TUBB3P1-201ENST00000405796 RAD54L2Q9Y4B4 1467 aa29.08■■■□□ 2.25
TUBB3P1-201ENST00000405796 TRIM41Q8WV44 630 aa29.07■■■□□ 2.24
TUBB3P1-201ENST00000405796 CUX1P39880 1505 aa29.06■■■□□ 2.24
TUBB3P1-201ENST00000405796 FGD5Q6ZNL6 1462 aa29.05■■■□□ 2.24
TUBB3P1-201ENST00000405796 TDRD9Q8NDG6 1382 aaKnown RBP29■■■□□ 2.23
TUBB3P1-201ENST00000405796 FBLN2P98095 1184 aa28.93■■■□□ 2.22
TUBB3P1-201ENST00000405796 WDR97A6NE52 1622 aa28.86■■■□□ 2.21
TUBB3P1-201ENST00000405796 CHD1O14646 1710 aa28.84■■■□□ 2.21
TUBB3P1-201ENST00000405796 SNAPC4Q5SXM2 1469 aa28.8■■■□□ 2.2
TUBB3P1-201ENST00000405796 RIMBP3CA6NJZ7 1639 aa28.78■■■□□ 2.2
TUBB3P1-201ENST00000405796 RIMBP3BA6NNM3 1639 aa28.78■■■□□ 2.2
TUBB3P1-201ENST00000405796 RIMBP3Q9UFD9 1639 aa28.78■■■□□ 2.2
TUBB3P1-201ENST00000405796 GRIN2BQ13224 1484 aa28.78■■■□□ 2.2
TUBB3P1-201ENST00000405796 CHMP7Q8WUX9 453 aaPredicted RBP28.75■■■□□ 2.19
TUBB3P1-201ENST00000405796 ARHGEF11O15085 1522 aa28.74■■■□□ 2.19
TUBB3P1-201ENST00000405796 WRNQ14191 1432 aaPredicted RBP eCLIP28.73■■■□□ 2.19
TUBB3P1-201ENST00000405796 GAPVD1Q14C86 1478 aa28.73■■■□□ 2.19
TUBB3P1-201ENST00000405796 MAGI1Q96QZ7 1491 aaPredicted RBP28.73■■■□□ 2.19
TUBB3P1-201ENST00000405796 ABCA10Q8WWZ4 1543 aa28.73■■■□□ 2.19
TUBB3P1-201ENST00000405796 TOP2BQ02880 1626 aa28.68■■■□□ 2.18
TUBB3P1-201ENST00000405796 BIVM-ERCC5R4GMW8 1640 aa28.65■■■□□ 2.18
TUBB3P1-201ENST00000405796 SYNJ1O43426 1573 aa28.64■■■□□ 2.18
TUBB3P1-201ENST00000405796 SYNJ2O15056 1496 aa28.64■■■□□ 2.18
TUBB3P1-201ENST00000405796 PBRM1Q86U86 1689 aa28.62■■■□□ 2.17
TUBB3P1-201ENST00000405796 ABCA5Q8WWZ7 1642 aa28.62■■■□□ 2.17
TUBB3P1-201ENST00000405796 CYB5RLQ6IPT4 315 aa28.59■■■□□ 2.17
TUBB3P1-201ENST00000405796 CLASP1Q7Z460 1538 aa28.53■■■□□ 2.16
TUBB3P1-201ENST00000405796 ARAP1Q96P48 1450 aa28.47■■■□□ 2.15
TUBB3P1-201ENST00000405796 GRIN2AQ12879 1464 aa28.4■■■□□ 2.14
TUBB3P1-201ENST00000405796 ADAMTS12P58397 1594 aa28.39■■■□□ 2.13
TUBB3P1-201ENST00000405796 FHAD1B1AJZ9 1412 aa28.38■■■□□ 2.13
TUBB3P1-201ENST00000405796 ERICH3Q5RHP9 1530 aa28.38■■■□□ 2.13
TUBB3P1-201ENST00000405796 NUP160Q12769 1436 aa28.28■■■□□ 2.12
TUBB3P1-201ENST00000405796 CEP170Q5SW79 1584 aa28.25■■■□□ 2.11
TUBB3P1-201ENST00000405796 TRHP20396 242 aaPredicted RBP28.19■■■□□ 2.1
TUBB3P1-201ENST00000405796 KIF27Q86VH2 1401 aa28.17■■■□□ 2.1
TUBB3P1-201ENST00000405796 IGF1RP08069 1367 aa28.12■■■□□ 2.09
TUBB3P1-201ENST00000405796 ERCC6L2Q5T890 1561 aa28.12■■■□□ 2.09
TUBB3P1-201ENST00000405796 SHROOM2Q13796 1616 aa28.09■■■□□ 2.09
TUBB3P1-201ENST00000405796 JPH4Q96JJ6 628 aa28.07■■■□□ 2.08
TUBB3P1-201ENST00000405796 PRG4Q92954 1404 aaPredicted RBP28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms