RNA–Protein interactions for RNA: ENST00000250003.3

MYOD1-201, Transcript of myogenic differentiation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MYOD1, Length 1,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MYOD1-201ENST00000250003 NISCHQ9Y2I1 1504 aa38.58■■■■□ 3.77
MYOD1-201ENST00000250003 CCDC180Q9P1Z9 1646 aa34.02■■■■□ 3.04
MYOD1-201ENST00000250003 ABCC9O60706 1549 aa33.65■■■□□ 2.98
MYOD1-201ENST00000250003 ZCCHC6Q5VYS8 1495 aaKnown RBP32.33■■■□□ 2.77
MYOD1-201ENST00000250003 DCAF8L2P0C7V8 631 aa32.23■■■□□ 2.75
MYOD1-201ENST00000250003 RB1CC1Q8TDY2 1594 aa32.2■■■□□ 2.74
MYOD1-201ENST00000250003 NACADO15069 1562 aa32.11■■■□□ 2.73
MYOD1-201ENST00000250003 DCAF1Q9Y4B6 1507 aa31.89■■■□□ 2.7
MYOD1-201ENST00000250003 MYO15BQ96JP2 1530 aa31.85■■■□□ 2.69
MYOD1-201ENST00000250003 PABPN1Q86U42 306 aaKnown RBP eCLIP31.49■■■□□ 2.63
MYOD1-201ENST00000250003 UNC13AQ9UPW8 1703 aa31.39■■■□□ 2.61
MYOD1-201ENST00000250003 BICRAQ9NZM4 1560 aa31.25■■■□□ 2.59
MYOD1-201ENST00000250003 DNAJC5BQ9UF47 199 aa31.19■■■□□ 2.58
MYOD1-201ENST00000250003 SCRIBQ14160 1630 aa31.14■■■□□ 2.57
MYOD1-201ENST00000250003 SHROOM4Q9ULL8 1493 aa31.11■■■□□ 2.57
MYOD1-201ENST00000250003 EIF4G1Q04637 1599 aaKnown RBP30.44■■■□□ 2.46
MYOD1-201ENST00000250003 CC2D2AQ9P2K1 1620 aa30.37■■■□□ 2.45
MYOD1-201ENST00000250003 CECR2Q9BXF3 1484 aa30.26■■■□□ 2.43
MYOD1-201ENST00000250003 BAZ1AQ9NRL2 1556 aaPredicted RBP29.84■■■□□ 2.37
MYOD1-201ENST00000250003 MROH2BQ7Z745 1585 aa29.79■■■□□ 2.36
MYOD1-201ENST00000250003 SMARCA4P51532 1647 aa29.79■■■□□ 2.36
MYOD1-201ENST00000250003 RSF1Q96T23 1441 aaPredicted RBP29.72■■■□□ 2.35
MYOD1-201ENST00000250003 NCAPD3P42695 1498 aa29.69■■■□□ 2.34
MYOD1-201ENST00000250003 ATAD2BQ9ULI0 1458 aa29.66■■■□□ 2.34
MYOD1-201ENST00000250003 SUPT5HO00267 1087 aaKnown RBP29.65■■■□□ 2.34
MYOD1-201ENST00000250003 SMARCA2P51531 1590 aa29.57■■■□□ 2.32
MYOD1-201ENST00000250003 WIZO95785 1651 aa29.55■■■□□ 2.32
MYOD1-201ENST00000250003 HMGXB3Q12766 1538 aa29.45■■■□□ 2.31
MYOD1-201ENST00000250003 PEG3Q9GZU2 1588 aa29.44■■■□□ 2.3
MYOD1-201ENST00000250003 BAZ1BQ9UIG0 1483 aaKnown RBP29.39■■■□□ 2.29
MYOD1-201ENST00000250003 TOP2AP11388 1531 aaKnown RBP29.23■■■□□ 2.27
MYOD1-201ENST00000250003 NESP48681 1621 aa29.05■■■□□ 2.24
MYOD1-201ENST00000250003 ERCC6Q03468 1493 aa29.01■■■□□ 2.23
MYOD1-201ENST00000250003 LAMC3Q9Y6N6 1575 aa28.88■■■□□ 2.21
MYOD1-201ENST00000250003 CCDC88BA6NC98 1476 aa28.88■■■□□ 2.21
MYOD1-201ENST00000250003 CADPSQ9ULU8 1353 aa28.84■■■□□ 2.21
MYOD1-201ENST00000250003 PDS5BQ9NTI5 1447 aa28.76■■■□□ 2.19
MYOD1-201ENST00000250003 CUX2O14529 1486 aa28.75■■■□□ 2.19
MYOD1-201ENST00000250003 KIF21AQ7Z4S6 1674 aa28.59■■■□□ 2.17
MYOD1-201ENST00000250003 CFTRP13569 1480 aa28.59■■■□□ 2.17
MYOD1-201ENST00000250003 THOC2Q8NI27 1593 aaKnown RBP28.57■■■□□ 2.16
MYOD1-201ENST00000250003 FANCD2Q9BXW9 1451 aa28.47■■■□□ 2.15
MYOD1-201ENST00000250003 MRC2Q9UBG0 1479 aa28.44■■■□□ 2.14
MYOD1-201ENST00000250003 CEP164Q9UPV0 1460 aa28.44■■■□□ 2.14
MYOD1-201ENST00000250003 PRDM2Q13029 1718 aa28.36■■■□□ 2.13
MYOD1-201ENST00000250003 WDR62O43379 1518 aa28.33■■■□□ 2.13
MYOD1-201ENST00000250003 DNAJC5Q9H3Z4 198 aa28.26■■■□□ 2.11
MYOD1-201ENST00000250003 URB2Q14146 1524 aaKnown RBP28.19■■■□□ 2.1
MYOD1-201ENST00000250003 ABCC8Q09428 1581 aa28.16■■■□□ 2.1
MYOD1-201ENST00000250003 CHIC1Q5VXU3 224 aa28.11■■■□□ 2.09
MYOD1-201ENST00000250003 WRNQ14191 1432 aaPredicted RBP eCLIP28■■■□□ 2.07
MYOD1-201ENST00000250003 TOPBP1Q92547 1522 aa27.98■■■□□ 2.07
MYOD1-201ENST00000250003 SYNJ1O43426 1573 aa27.95■■■□□ 2.06
MYOD1-201ENST00000250003 TRIM41Q8WV44 630 aa27.9■■■□□ 2.06
MYOD1-201ENST00000250003 CUX1P39880 1505 aa27.9■■■□□ 2.06
MYOD1-201ENST00000250003 DNMBPQ6XZF7 1577 aa27.89■■■□□ 2.05
MYOD1-201ENST00000250003 IFT140Q96RY7 1462 aa27.86■■■□□ 2.05
MYOD1-201ENST00000250003 TOP2BQ02880 1626 aa27.86■■■□□ 2.05
MYOD1-201ENST00000250003 BIVM-ERCC5R4GMW8 1640 aa27.86■■■□□ 2.05
MYOD1-201ENST00000250003 ZNF608Q9ULD9 1512 aaPredicted RBP27.78■■■□□ 2.04
MYOD1-201ENST00000250003 POLA1P09884 1462 aaPredicted RBP27.74■■■□□ 2.03
MYOD1-201ENST00000250003 FGD5Q6ZNL6 1462 aa27.67■■■□□ 2.02
MYOD1-201ENST00000250003 SOGA1O94964 1423 aa27.66■■■□□ 2.02
MYOD1-201ENST00000250003 TARBP1Q13395 1621 aaKnown RBP27.66■■■□□ 2.02
MYOD1-201ENST00000250003 RAD54L2Q9Y4B4 1467 aa27.65■■■□□ 2.02
MYOD1-201ENST00000250003 OSCARQ8IYS5 282 aa27.64■■■□□ 2.01
MYOD1-201ENST00000250003 AQRO60306 1485 aaKnown RBP eCLIP27.62■■■□□ 2.01
MYOD1-201ENST00000250003 EIF4G3O43432 1585 aaKnown RBP27.58■■■□□ 2.01
MYOD1-201ENST00000250003 TDRD9Q8NDG6 1382 aaKnown RBP27.56■■■□□ 2
MYOD1-201ENST00000250003 WDR97A6NE52 1622 aa27.43■■□□□ 1.98
MYOD1-201ENST00000250003 RUSC2Q8N2Y8 1516 aa27.42■■□□□ 1.98
MYOD1-201ENST00000250003 ABCA10Q8WWZ4 1543 aa27.4■■□□□ 1.98
MYOD1-201ENST00000250003 FAM9AQ8IZU1 332 aaPredicted RBP27.39■■□□□ 1.98
MYOD1-201ENST00000250003 FBLN2P98095 1184 aa27.39■■□□□ 1.97
MYOD1-201ENST00000250003 GRIN2BQ13224 1484 aa27.33■■□□□ 1.97
MYOD1-201ENST00000250003 KIF27Q86VH2 1401 aa27.32■■□□□ 1.96
MYOD1-201ENST00000250003 EEA1Q15075 1411 aa27.31■■□□□ 1.96
MYOD1-201ENST00000250003 GAPVD1Q14C86 1478 aa27.31■■□□□ 1.96
MYOD1-201ENST00000250003 SNAPC4Q5SXM2 1469 aa27.31■■□□□ 1.96
MYOD1-201ENST00000250003 CHMP7Q8WUX9 453 aaPredicted RBP27.27■■□□□ 1.96
MYOD1-201ENST00000250003 ABCA5Q8WWZ7 1642 aa27.27■■□□□ 1.96
MYOD1-201ENST00000250003 MAGI1Q96QZ7 1491 aaPredicted RBP27.25■■□□□ 1.95
MYOD1-201ENST00000250003 CHD1O14646 1710 aa27.24■■□□□ 1.95
MYOD1-201ENST00000250003 CSRNP3Q8WYN3 585 aa27.17■■□□□ 1.94
MYOD1-201ENST00000250003 SYNJ2O15056 1496 aa27.17■■□□□ 1.94
MYOD1-201ENST00000250003 PBRM1Q86U86 1689 aa27.15■■□□□ 1.94
MYOD1-201ENST00000250003 IGF1RP08069 1367 aa27.1■■□□□ 1.93
MYOD1-201ENST00000250003 ARHGEF11O15085 1522 aa27.09■■□□□ 1.93
MYOD1-201ENST00000250003 RIMBP3CA6NJZ7 1639 aa27.08■■□□□ 1.93
MYOD1-201ENST00000250003 RIMBP3BA6NNM3 1639 aa27.08■■□□□ 1.93
MYOD1-201ENST00000250003 RIMBP3Q9UFD9 1639 aa27.08■■□□□ 1.93
MYOD1-201ENST00000250003 ERICH3Q5RHP9 1530 aa27.08■■□□□ 1.93
MYOD1-201ENST00000250003 EHMT2Q96KQ7 1210 aa27.05■■□□□ 1.92
MYOD1-201ENST00000250003 KIF21BO75037 1637 aa27.04■■□□□ 1.92
MYOD1-201ENST00000250003 CUL7Q14999 1698 aa27.03■■□□□ 1.92
MYOD1-201ENST00000250003 PRXQ9BXM0 1461 aa27.02■■□□□ 1.92
MYOD1-201ENST00000250003 LOC105371045A0A1W2PR82 267 aa27.01■■□□□ 1.91
MYOD1-201ENST00000250003 CLASP1Q7Z460 1538 aa26.99■■□□□ 1.91
MYOD1-201ENST00000250003 FHAD1B1AJZ9 1412 aa26.99■■□□□ 1.91
MYOD1-201ENST00000250003 RAPGEF2Q9Y4G8 1499 aa26.97■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms