RNA–Protein interactions for RNA: ENST00000341754.8

RAD1-202, Transcript of RAD1 checkpoint DNA exonuclease, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAD1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD1-202ENST00000341754 NISCHQ9Y2I1 1504 aa35.71■■■■□ 3.31
RAD1-202ENST00000341754 CCDC180Q9P1Z9 1646 aa30.78■■■□□ 2.52
RAD1-202ENST00000341754 SHROOM4Q9ULL8 1493 aa30.53■■■□□ 2.48
RAD1-202ENST00000341754 ZCCHC6Q5VYS8 1495 aaKnown RBP30.24■■■□□ 2.43
RAD1-202ENST00000341754 SUPT5HO00267 1087 aaKnown RBP29.95■■■□□ 2.39
RAD1-202ENST00000341754 DCAF8L2P0C7V8 631 aa29.55■■■□□ 2.32
RAD1-202ENST00000341754 ABCC9O60706 1549 aa29.35■■■□□ 2.29
RAD1-202ENST00000341754 DCAF1Q9Y4B6 1507 aa29.28■■■□□ 2.28
RAD1-202ENST00000341754 MYO15BQ96JP2 1530 aa29.21■■■□□ 2.27
RAD1-202ENST00000341754 CHIC1Q5VXU3 224 aa29.2■■■□□ 2.27
RAD1-202ENST00000341754 NACADO15069 1562 aa28.68■■■□□ 2.18
RAD1-202ENST00000341754 SCRIBQ14160 1630 aa28.54■■■□□ 2.16
RAD1-202ENST00000341754 HRCP23327 699 aa28.48■■■□□ 2.15
RAD1-202ENST00000341754 RB1CC1Q8TDY2 1594 aa28.46■■■□□ 2.15
RAD1-202ENST00000341754 PCGF6Q9BYE7 350 aa28.4■■■□□ 2.14
RAD1-202ENST00000341754 LOC105371045A0A1W2PR82 267 aa28.36■■■□□ 2.13
RAD1-202ENST00000341754 RSF1Q96T23 1441 aaPredicted RBP28.31■■■□□ 2.12
RAD1-202ENST00000341754 UNC13AQ9UPW8 1703 aa28.03■■■□□ 2.08
RAD1-202ENST00000341754 PPARGC1BQ86YN6 1023 aaKnown RBP27.92■■■□□ 2.06
RAD1-202ENST00000341754 CECR2Q9BXF3 1484 aa27.88■■■□□ 2.05
RAD1-202ENST00000341754 TRIM41Q8WV44 630 aa27.86■■■□□ 2.05
RAD1-202ENST00000341754 TRIM26Q12899 539 aaPredicted RBP27.8■■■□□ 2.04
RAD1-202ENST00000341754 MROH2BQ7Z745 1585 aa27.8■■■□□ 2.04
RAD1-202ENST00000341754 PABPN1Q86U42 306 aaKnown RBP eCLIP27.76■■■□□ 2.04
RAD1-202ENST00000341754 BICRAQ9NZM4 1560 aa27.71■■■□□ 2.03
RAD1-202ENST00000341754 WIZO95785 1651 aa27.68■■■□□ 2.02
RAD1-202ENST00000341754 FAM9AQ8IZU1 332 aaPredicted RBP27.68■■■□□ 2.02
RAD1-202ENST00000341754 BAZ1AQ9NRL2 1556 aaPredicted RBP27.48■■□□□ 1.99
RAD1-202ENST00000341754 EHMT2Q96KQ7 1210 aa27.45■■□□□ 1.99
RAD1-202ENST00000341754 EIF4G1Q04637 1599 aaKnown RBP27.38■■□□□ 1.97
RAD1-202ENST00000341754 SMARCA4P51532 1647 aa27.26■■□□□ 1.95
RAD1-202ENST00000341754 TOP2AP11388 1531 aaKnown RBP27.19■■□□□ 1.94
RAD1-202ENST00000341754 ZEB1P37275 1124 aaPredicted RBP27.18■■□□□ 1.94
RAD1-202ENST00000341754 ABCC8Q09428 1581 aa27.1■■□□□ 1.93
RAD1-202ENST00000341754 CCDC88BA6NC98 1476 aa27.09■■□□□ 1.93
RAD1-202ENST00000341754 SMARCA2P51531 1590 aa27.08■■□□□ 1.93
RAD1-202ENST00000341754 SOGA1O94964 1423 aa26.83■■□□□ 1.89
RAD1-202ENST00000341754 PEG3Q9GZU2 1588 aa26.83■■□□□ 1.89
RAD1-202ENST00000341754 ATAD2BQ9ULI0 1458 aa26.81■■□□□ 1.88
RAD1-202ENST00000341754 CEP162Q5TB80 1403 aa26.75■■□□□ 1.87
RAD1-202ENST00000341754 WRNQ14191 1432 aaPredicted RBP eCLIP26.74■■□□□ 1.87
RAD1-202ENST00000341754 RUSC2Q8N2Y8 1516 aa26.73■■□□□ 1.87
RAD1-202ENST00000341754 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.72■■□□□ 1.87
RAD1-202ENST00000341754 TNIKQ9UKE5 1360 aa26.67■■□□□ 1.86
RAD1-202ENST00000341754 BAZ1BQ9UIG0 1483 aaKnown RBP26.67■■□□□ 1.86
RAD1-202ENST00000341754 EEA1Q15075 1411 aa26.64■■□□□ 1.86
RAD1-202ENST00000341754 CSRNP3Q8WYN3 585 aa26.63■■□□□ 1.85
RAD1-202ENST00000341754 TTBK1Q5TCY1 1321 aaPredicted RBP26.6■■□□□ 1.85
RAD1-202ENST00000341754 CCER1Q8TC90 406 aaPredicted RBP26.6■■□□□ 1.85
RAD1-202ENST00000341754 UBTFP17480 764 aaKnown RBP26.52■■□□□ 1.84
RAD1-202ENST00000341754 NCAPD3P42695 1498 aa26.51■■□□□ 1.83
RAD1-202ENST00000341754 GOLGA3Q08378 1498 aa26.5■■□□□ 1.83
RAD1-202ENST00000341754 SYNJ1O43426 1573 aa26.49■■□□□ 1.83
RAD1-202ENST00000341754 CC2D2AQ9P2K1 1620 aa26.48■■□□□ 1.83
RAD1-202ENST00000341754 HMGXB3Q12766 1538 aa26.45■■□□□ 1.82
RAD1-202ENST00000341754 KIF21BO75037 1637 aa26.35■■□□□ 1.81
RAD1-202ENST00000341754 SCAF1Q9H7N4 1312 aaKnown RBP26.34■■□□□ 1.81
RAD1-202ENST00000341754 CEP164Q9UPV0 1460 aa26.34■■□□□ 1.81
RAD1-202ENST00000341754 CLIP1P30622 1438 aa26.21■■□□□ 1.79
RAD1-202ENST00000341754 RAPGEF2Q9Y4G8 1499 aa26.18■■□□□ 1.78
RAD1-202ENST00000341754 DIEXFQ68CQ4 756 aaKnown RBP26.15■■□□□ 1.78
RAD1-202ENST00000341754 TOP2BQ02880 1626 aa26.13■■□□□ 1.77
RAD1-202ENST00000341754 VPS8Q8N3P4 1428 aa26.12■■□□□ 1.77
RAD1-202ENST00000341754 DNAJC5BQ9UF47 199 aa26.05■■□□□ 1.76
RAD1-202ENST00000341754 BIVM-ERCC5R4GMW8 1640 aa26.05■■□□□ 1.76
RAD1-202ENST00000341754 HNRNPUL2Q1KMD3 747 aaKnown RBP26.03■■□□□ 1.76
RAD1-202ENST00000341754 ACIN1Q9UKV3 1341 aaKnown RBP26.01■■□□□ 1.75
RAD1-202ENST00000341754 NEUROD1Q13562 356 aa26■■□□□ 1.75
RAD1-202ENST00000341754 RANGAP1P46060 587 aaPredicted RBP26■■□□□ 1.75
RAD1-202ENST00000341754 CFTRP13569 1480 aa25.97■■□□□ 1.75
RAD1-202ENST00000341754 ZNF316A6NFI3 1004 aaPredicted RBP25.93■■□□□ 1.74
RAD1-202ENST00000341754 APLP2Q06481 763 aa25.9■■□□□ 1.74
RAD1-202ENST00000341754 PRXQ9BXM0 1461 aa25.89■■□□□ 1.74
RAD1-202ENST00000341754 ERICH3Q5RHP9 1530 aa25.89■■□□□ 1.73
RAD1-202ENST00000341754 CADPSQ9ULU8 1353 aa25.88■■□□□ 1.73
RAD1-202ENST00000341754 CUX1P39880 1505 aa25.86■■□□□ 1.73
RAD1-202ENST00000341754 ARAP1Q96P48 1450 aa25.82■■□□□ 1.72
RAD1-202ENST00000341754 NESP48681 1621 aa25.8■■□□□ 1.72
RAD1-202ENST00000341754 PRDM2Q13029 1718 aa25.78■■□□□ 1.72
RAD1-202ENST00000341754 CENPBP07199 599 aaPredicted RBP25.78■■□□□ 1.72
RAD1-202ENST00000341754 PELP1Q8IZL8 1130 aaKnown RBP25.74■■□□□ 1.71
RAD1-202ENST00000341754 GTF3C3Q9Y5Q9 886 aa25.72■■□□□ 1.71
RAD1-202ENST00000341754 KIF27Q86VH2 1401 aa25.71■■□□□ 1.71
RAD1-202ENST00000341754 KANK4Q5T7N3 995 aaPredicted RBP25.68■■□□□ 1.7
RAD1-202ENST00000341754 FANCD2Q9BXW9 1451 aa25.63■■□□□ 1.69
RAD1-202ENST00000341754 MIER1Q8N108 512 aa25.61■■□□□ 1.69
RAD1-202ENST00000341754 LAMC3Q9Y6N6 1575 aa25.59■■□□□ 1.69
RAD1-202ENST00000341754 DHX57Q6P158 1386 aaKnown RBP25.58■■□□□ 1.69
RAD1-202ENST00000341754 ARHGAP35Q9NRY4 1499 aa25.57■■□□□ 1.68
RAD1-202ENST00000341754 YTHDC1Q96MU7 727 aaKnown RBP25.55■■□□□ 1.68
RAD1-202ENST00000341754 RRBP1Q9P2E9 1410 aaKnown RBP25.53■■□□□ 1.68
RAD1-202ENST00000341754 CLSPNQ9HAW4 1339 aa25.49■■□□□ 1.67
RAD1-202ENST00000341754 CUX2O14529 1486 aa25.46■■□□□ 1.67
RAD1-202ENST00000341754 IGF1RP08069 1367 aa25.45■■□□□ 1.66
RAD1-202ENST00000341754 KIF21AQ7Z4S6 1674 aa25.43■■□□□ 1.66
RAD1-202ENST00000341754 PDS5BQ9NTI5 1447 aa25.42■■□□□ 1.66
RAD1-202ENST00000341754 CCNB3Q8WWL7 1395 aa25.4■■□□□ 1.66
RAD1-202ENST00000341754 FGD5Q6ZNL6 1462 aa25.38■■□□□ 1.65
RAD1-202ENST00000341754 TOPBP1Q92547 1522 aa25.35■■□□□ 1.65
RAD1-202ENST00000341754 DNMBPQ6XZF7 1577 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms