Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
AP1S3Q96PC3 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
AP1S3Q96PC3 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
AP1S3Q96PC3 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
AP1S3Q96PC3 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
AP1S3Q96PC3 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
AP1S3Q96PC3 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC17.88■□□□□ 0.45
AP1S3Q96PC3 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
AP1S3Q96PC3 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
AP1S3Q96PC3 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
AP1S3Q96PC3 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC17.87■□□□□ 0.45
AP1S3Q96PC3 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
AP1S3Q96PC3 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
AP1S3Q96PC3 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
AP1S3Q96PC3 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
AP1S3Q96PC3 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC17.87■□□□□ 0.45
AP1S3Q96PC3 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
AP1S3Q96PC3 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
AP1S3Q96PC3 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
AP1S3Q96PC3 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
AP1S3Q96PC3 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC17.87■□□□□ 0.45
AP1S3Q96PC3 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
AP1S3Q96PC3 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
AP1S3Q96PC3 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
AP1S3Q96PC3 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
AP1S3Q96PC3 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
AP1S3Q96PC3 CALM3-209ENST00000597743 577 ntTSL 4 BASIC17.86■□□□□ 0.45
AP1S3Q96PC3 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
AP1S3Q96PC3 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
AP1S3Q96PC3 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
AP1S3Q96PC3 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
AP1S3Q96PC3 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
AP1S3Q96PC3 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
AP1S3Q96PC3 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC17.85■□□□□ 0.45
AP1S3Q96PC3 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC17.85■□□□□ 0.45
AP1S3Q96PC3 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
AP1S3Q96PC3 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC17.85■□□□□ 0.45
AP1S3Q96PC3 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
AP1S3Q96PC3 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
AP1S3Q96PC3 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC17.84■□□□□ 0.45
AP1S3Q96PC3 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
AP1S3Q96PC3 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
AP1S3Q96PC3 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
AP1S3Q96PC3 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
AP1S3Q96PC3 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
AP1S3Q96PC3 THRA-202ENST00000394121 2260 ntTSL 2 BASIC17.84■□□□□ 0.45
AP1S3Q96PC3 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
AP1S3Q96PC3 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
AP1S3Q96PC3 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC17.84■□□□□ 0.45
AP1S3Q96PC3 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC17.83■□□□□ 0.45
AP1S3Q96PC3 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
AP1S3Q96PC3 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
AP1S3Q96PC3 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC17.83■□□□□ 0.44
AP1S3Q96PC3 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
AP1S3Q96PC3 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC17.83■□□□□ 0.44
AP1S3Q96PC3 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC17.83■□□□□ 0.44
AP1S3Q96PC3 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
AP1S3Q96PC3 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
AP1S3Q96PC3 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC17.83■□□□□ 0.44
AP1S3Q96PC3 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC17.83■□□□□ 0.44
AP1S3Q96PC3 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP1S3Q96PC3 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP1S3Q96PC3 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP1S3Q96PC3 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP1S3Q96PC3 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
AP1S3Q96PC3 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP1S3Q96PC3 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
AP1S3Q96PC3 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP1S3Q96PC3 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC17.82■□□□□ 0.44
AP1S3Q96PC3 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
AP1S3Q96PC3 WHAMMP3-201ENST00000611636 1609 ntBASIC17.82■□□□□ 0.44
AP1S3Q96PC3 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC17.82■□□□□ 0.44
AP1S3Q96PC3 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
AP1S3Q96PC3 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
AP1S3Q96PC3 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
AP1S3Q96PC3 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
AP1S3Q96PC3 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
AP1S3Q96PC3 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC17.81■□□□□ 0.44
AP1S3Q96PC3 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
AP1S3Q96PC3 AC133561.1-201ENST00000568600 2415 ntBASIC17.81■□□□□ 0.44
AP1S3Q96PC3 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
AP1S3Q96PC3 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
AP1S3Q96PC3 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
AP1S3Q96PC3 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
AP1S3Q96PC3 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
AP1S3Q96PC3 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
AP1S3Q96PC3 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP1S3Q96PC3 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.8■□□□□ 0.44
AP1S3Q96PC3 AC110285.7-201ENST00000624417 1536 ntBASIC17.8■□□□□ 0.44
AP1S3Q96PC3 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
AP1S3Q96PC3 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC17.8■□□□□ 0.44
AP1S3Q96PC3 AC012676.1-201ENST00000574705 1949 ntBASIC17.8■□□□□ 0.44
AP1S3Q96PC3 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP1S3Q96PC3 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
AP1S3Q96PC3 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP1S3Q96PC3 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP1S3Q96PC3 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC17.79■□□□□ 0.44
AP1S3Q96PC3 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP1S3Q96PC3 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
AP1S3Q96PC3 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms