RNA–Protein interactions for RNA: ENST00000376862.3

SYNDIG1-201, Transcript of synapse differentiation inducing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNDIG1, Length 2,522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNDIG1-201ENST00000376862 NISCHQ9Y2I1 1504 aa42.43■■■■■ 4.38
SYNDIG1-201ENST00000376862 HRCP23327 699 aa37.27■■■■□ 3.56
SYNDIG1-201ENST00000376862 SHROOM4Q9ULL8 1493 aa37.12■■■■□ 3.53
SYNDIG1-201ENST00000376862 SUPT5HO00267 1087 aaKnown RBP36.91■■■■□ 3.5
SYNDIG1-201ENST00000376862 MYO15BQ96JP2 1530 aa36.64■■■■□ 3.46
SYNDIG1-201ENST00000376862 PCGF6Q9BYE7 350 aa36.54■■■■□ 3.44
SYNDIG1-201ENST00000376862 PPARGC1BQ86YN6 1023 aaKnown RBP36.52■■■■□ 3.44
SYNDIG1-201ENST00000376862 CHIC1Q5VXU3 224 aa36.33■■■■□ 3.41
SYNDIG1-201ENST00000376862 CCDC180Q9P1Z9 1646 aa36.28■■■■□ 3.4
SYNDIG1-201ENST00000376862 ZCCHC6Q5VYS8 1495 aaKnown RBP35.8■■■■□ 3.32
SYNDIG1-201ENST00000376862 DCAF1Q9Y4B6 1507 aa35.8■■■■□ 3.32
SYNDIG1-201ENST00000376862 PELP1Q8IZL8 1130 aaKnown RBP35.71■■■■□ 3.31
SYNDIG1-201ENST00000376862 LOC105371045A0A1W2PR82 267 aa35.47■■■■□ 3.27
SYNDIG1-201ENST00000376862 TRIM26Q12899 539 aaPredicted RBP35.4■■■■□ 3.26
SYNDIG1-201ENST00000376862 DCAF8L2P0C7V8 631 aa35.37■■■■□ 3.25
SYNDIG1-201ENST00000376862 SCAF1Q9H7N4 1312 aaKnown RBP35.21■■■■□ 3.23
SYNDIG1-201ENST00000376862 ZEB1P37275 1124 aaPredicted RBP35.05■■■■□ 3.2
SYNDIG1-201ENST00000376862 ACIN1Q9UKV3 1341 aaKnown RBP34.36■■■■□ 3.09
SYNDIG1-201ENST00000376862 NEUROD1Q13562 356 aa34.28■■■■□ 3.08
SYNDIG1-201ENST00000376862 MYT1Q01538 1121 aa34.25■■■■□ 3.07
SYNDIG1-201ENST00000376862 TRIM41Q8WV44 630 aa34.14■■■■□ 3.06
SYNDIG1-201ENST00000376862 FAM9AQ8IZU1 332 aaPredicted RBP34.13■■■■□ 3.05
SYNDIG1-201ENST00000376862 GTF3C3Q9Y5Q9 886 aa34.07■■■■□ 3.04
SYNDIG1-201ENST00000376862 ABCC9O60706 1549 aa34.05■■■■□ 3.04
SYNDIG1-201ENST00000376862 EHMT2Q96KQ7 1210 aa33.97■■■■□ 3.03
SYNDIG1-201ENST00000376862 SCRIBQ14160 1630 aa33.96■■■■□ 3.03
SYNDIG1-201ENST00000376862 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.92■■■■□ 3.02
SYNDIG1-201ENST00000376862 CENPBP07199 599 aaPredicted RBP33.9■■■■□ 3.02
SYNDIG1-201ENST00000376862 CCER1Q8TC90 406 aaPredicted RBP33.83■■■■□ 3.01
SYNDIG1-201ENST00000376862 DIEXFQ68CQ4 756 aaKnown RBP33.83■■■■□ 3.01
SYNDIG1-201ENST00000376862 RSF1Q96T23 1441 aaPredicted RBP33.82■■■■□ 3
SYNDIG1-201ENST00000376862 RB1CC1Q8TDY2 1594 aa33.75■■■□□ 2.99
SYNDIG1-201ENST00000376862 NACADO15069 1562 aa33.64■■■□□ 2.98
SYNDIG1-201ENST00000376862 YTHDC1Q96MU7 727 aaKnown RBP33.27■■■□□ 2.92
SYNDIG1-201ENST00000376862 ZNF316A6NFI3 1004 aaPredicted RBP33.21■■■□□ 2.91
SYNDIG1-201ENST00000376862 TTBK1Q5TCY1 1321 aaPredicted RBP33.17■■■□□ 2.9
SYNDIG1-201ENST00000376862 CECR2Q9BXF3 1484 aa33.13■■■□□ 2.89
SYNDIG1-201ENST00000376862 WRNQ14191 1432 aaPredicted RBP eCLIP33■■■□□ 2.87
SYNDIG1-201ENST00000376862 MIER1Q8N108 512 aa32.99■■■□□ 2.87
SYNDIG1-201ENST00000376862 MROH2BQ7Z745 1585 aa32.97■■■□□ 2.87
SYNDIG1-201ENST00000376862 CEP162Q5TB80 1403 aa32.83■■■□□ 2.85
SYNDIG1-201ENST00000376862 WIZO95785 1651 aa32.82■■■□□ 2.85
SYNDIG1-201ENST00000376862 EIF4G1Q04637 1599 aaKnown RBP32.79■■■□□ 2.84
SYNDIG1-201ENST00000376862 UNC13AQ9UPW8 1703 aa32.71■■■□□ 2.83
SYNDIG1-201ENST00000376862 BAZ1AQ9NRL2 1556 aaPredicted RBP32.63■■■□□ 2.81
SYNDIG1-201ENST00000376862 TNIKQ9UKE5 1360 aa32.6■■■□□ 2.81
SYNDIG1-201ENST00000376862 CCDC88BA6NC98 1476 aa32.59■■■□□ 2.81
SYNDIG1-201ENST00000376862 ABCC8Q09428 1581 aa32.58■■■□□ 2.81
SYNDIG1-201ENST00000376862 HNRNPUL2Q1KMD3 747 aaKnown RBP32.48■■■□□ 2.79
SYNDIG1-201ENST00000376862 SOGA1O94964 1423 aa32.48■■■□□ 2.79
SYNDIG1-201ENST00000376862 SUPT16HQ9Y5B9 1047 aaKnown RBP32.47■■■□□ 2.79
SYNDIG1-201ENST00000376862 PABPN1Q86U42 306 aaKnown RBP eCLIP32.43■■■□□ 2.78
SYNDIG1-201ENST00000376862 SMARCA4P51532 1647 aa32.41■■■□□ 2.78
SYNDIG1-201ENST00000376862 UBTFP17480 764 aaKnown RBP32.39■■■□□ 2.78
SYNDIG1-201ENST00000376862 CLSPNQ9HAW4 1339 aa32.37■■■□□ 2.77
SYNDIG1-201ENST00000376862 TSHZ2Q9NRE2 1034 aa32.31■■■□□ 2.76
SYNDIG1-201ENST00000376862 CSRNP3Q8WYN3 585 aa32.31■■■□□ 2.76
SYNDIG1-201ENST00000376862 RUSC2Q8N2Y8 1516 aa32.3■■■□□ 2.76
SYNDIG1-201ENST00000376862 ANP32EQ9BTT0 268 aa32.3■■■□□ 2.76
SYNDIG1-201ENST00000376862 BICRAQ9NZM4 1560 aa32.29■■■□□ 2.76
SYNDIG1-201ENST00000376862 TOP2AP11388 1531 aaKnown RBP32.25■■■□□ 2.75
SYNDIG1-201ENST00000376862 EEA1Q15075 1411 aa32.23■■■□□ 2.75
SYNDIG1-201ENST00000376862 GOLGA3Q08378 1498 aa32.21■■■□□ 2.75
SYNDIG1-201ENST00000376862 BCL11AQ9H165 835 aa32.15■■■□□ 2.74
SYNDIG1-201ENST00000376862 SMARCA2P51531 1590 aa32.08■■■□□ 2.73
SYNDIG1-201ENST00000376862 CLIP1P30622 1438 aa31.94■■■□□ 2.7
SYNDIG1-201ENST00000376862 VPS8Q8N3P4 1428 aa31.92■■■□□ 2.7
SYNDIG1-201ENST00000376862 DHX57Q6P158 1386 aaKnown RBP31.89■■■□□ 2.7
SYNDIG1-201ENST00000376862 CEP164Q9UPV0 1460 aa31.87■■■□□ 2.69
SYNDIG1-201ENST00000376862 APLP2Q06481 763 aa31.86■■■□□ 2.69
SYNDIG1-201ENST00000376862 KIF21BO75037 1637 aa31.83■■■□□ 2.69
SYNDIG1-201ENST00000376862 BCANQ96GW7 911 aa31.79■■■□□ 2.68
SYNDIG1-201ENST00000376862 PEG3Q9GZU2 1588 aa31.79■■■□□ 2.68
SYNDIG1-201ENST00000376862 KCNH8Q96L42 1107 aa31.74■■■□□ 2.67
SYNDIG1-201ENST00000376862 ATAD2BQ9ULI0 1458 aa31.68■■■□□ 2.66
SYNDIG1-201ENST00000376862 RANGAP1P46060 587 aaPredicted RBP31.66■■■□□ 2.66
SYNDIG1-201ENST00000376862 FKBP8Q14318 412 aa31.63■■■□□ 2.65
SYNDIG1-201ENST00000376862 BAZ1BQ9UIG0 1483 aaKnown RBP31.61■■■□□ 2.65
SYNDIG1-201ENST00000376862 SYNJ1O43426 1573 aa31.6■■■□□ 2.65
SYNDIG1-201ENST00000376862 RAPGEF2Q9Y4G8 1499 aa31.59■■■□□ 2.65
SYNDIG1-201ENST00000376862 RBM19Q9Y4C8 960 aaKnown RBP31.54■■■□□ 2.64
SYNDIG1-201ENST00000376862 KANK4Q5T7N3 995 aaPredicted RBP31.4■■■□□ 2.62
SYNDIG1-201ENST00000376862 RRBP1Q9P2E9 1410 aaKnown RBP31.34■■■□□ 2.61
SYNDIG1-201ENST00000376862 NEFLP07196 543 aa31.33■■■□□ 2.61
SYNDIG1-201ENST00000376862 CUX2O14529 1486 aa31.33■■■□□ 2.61
SYNDIG1-201ENST00000376862 ITGAEP38570 1179 aa31.32■■■□□ 2.6
SYNDIG1-201ENST00000376862 ARAP1Q96P48 1450 aa31.3■■■□□ 2.6
SYNDIG1-201ENST00000376862 MSH5O43196 834 aa31.28■■■□□ 2.6
SYNDIG1-201ENST00000376862 DDX10Q13206 875 aaKnown RBP31.28■■■□□ 2.6
SYNDIG1-201ENST00000376862 MAPKBP1O60336 1514 aa31.2■■■□□ 2.59
SYNDIG1-201ENST00000376862 CCNB3Q8WWL7 1395 aa31.17■■■□□ 2.58
SYNDIG1-201ENST00000376862 TRIM52Q96A61 297 aa31.17■■■□□ 2.58
SYNDIG1-201ENST00000376862 WDR97A6NE52 1622 aa31.12■■■□□ 2.57
SYNDIG1-201ENST00000376862 RAB3GAP2Q9H2M9 1393 aa31.12■■■□□ 2.57
SYNDIG1-201ENST00000376862 NCAPD3P42695 1498 aa31.12■■■□□ 2.57
SYNDIG1-201ENST00000376862 PPP1R15AO75807 674 aaPredicted RBP31.1■■■□□ 2.57
SYNDIG1-201ENST00000376862 HMGXB3Q12766 1538 aa31.09■■■□□ 2.57
SYNDIG1-201ENST00000376862 ERICH3Q5RHP9 1530 aa31.07■■■□□ 2.56
SYNDIG1-201ENST00000376862 PRXQ9BXM0 1461 aa31.02■■■□□ 2.56
SYNDIG1-201ENST00000376862 CCER2I3L3R5 266 aa31.02■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms