RNA–Protein interactions for RNA: ENST00000503396.5

PDS5A-202, Transcript of PDS5 cohesin associated factor A, humanhuman

TSL 1 (best) BASIC

Gene PDS5A, Length 2,685 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5A-202ENST00000503396 NISCHQ9Y2I1 1504 aa44.59■■■■■ 4.73
PDS5A-202ENST00000503396 CCDC180Q9P1Z9 1646 aa38.67■■■■□ 3.78
PDS5A-202ENST00000503396 SHROOM4Q9ULL8 1493 aa37.93■■■■□ 3.66
PDS5A-202ENST00000503396 SUPT5HO00267 1087 aaKnown RBP37.63■■■■□ 3.61
PDS5A-202ENST00000503396 HRCP23327 699 aa37.57■■■■□ 3.61
PDS5A-202ENST00000503396 ZCCHC6Q5VYS8 1495 aaKnown RBP37.43■■■■□ 3.58
PDS5A-202ENST00000503396 MYO15BQ96JP2 1530 aa37.22■■■■□ 3.55
PDS5A-202ENST00000503396 DCAF8L2P0C7V8 631 aa37.15■■■■□ 3.54
PDS5A-202ENST00000503396 CHIC1Q5VXU3 224 aa37.07■■■■□ 3.52
PDS5A-202ENST00000503396 PCGF6Q9BYE7 350 aa36.89■■■■□ 3.5
PDS5A-202ENST00000503396 ABCC9O60706 1549 aa36.85■■■■□ 3.49
PDS5A-202ENST00000503396 DCAF1Q9Y4B6 1507 aa36.68■■■■□ 3.46
PDS5A-202ENST00000503396 PPARGC1BQ86YN6 1023 aaKnown RBP36.67■■■■□ 3.46
PDS5A-202ENST00000503396 LOC105371045A0A1W2PR82 267 aa36.04■■■■□ 3.36
PDS5A-202ENST00000503396 NACADO15069 1562 aa36.04■■■■□ 3.36
PDS5A-202ENST00000503396 TRIM26Q12899 539 aaPredicted RBP35.94■■■■□ 3.34
PDS5A-202ENST00000503396 SCRIBQ14160 1630 aa35.84■■■■□ 3.33
PDS5A-202ENST00000503396 RB1CC1Q8TDY2 1594 aa35.75■■■■□ 3.31
PDS5A-202ENST00000503396 PELP1Q8IZL8 1130 aaKnown RBP35.62■■■■□ 3.29
PDS5A-202ENST00000503396 ZEB1P37275 1124 aaPredicted RBP35.55■■■■□ 3.28
PDS5A-202ENST00000503396 SCAF1Q9H7N4 1312 aaKnown RBP35.25■■■■□ 3.23
PDS5A-202ENST00000503396 UNC13AQ9UPW8 1703 aa35.19■■■■□ 3.22
PDS5A-202ENST00000503396 TRIM41Q8WV44 630 aa34.94■■■■□ 3.18
PDS5A-202ENST00000503396 RSF1Q96T23 1441 aaPredicted RBP34.91■■■■□ 3.18
PDS5A-202ENST00000503396 PABPN1Q86U42 306 aaKnown RBP eCLIP34.89■■■■□ 3.18
PDS5A-202ENST00000503396 CECR2Q9BXF3 1484 aa34.81■■■■□ 3.16
PDS5A-202ENST00000503396 BICRAQ9NZM4 1560 aa34.81■■■■□ 3.16
PDS5A-202ENST00000503396 FAM9AQ8IZU1 332 aaPredicted RBP34.74■■■■□ 3.15
PDS5A-202ENST00000503396 ACIN1Q9UKV3 1341 aaKnown RBP34.56■■■■□ 3.12
PDS5A-202ENST00000503396 MROH2BQ7Z745 1585 aa34.56■■■■□ 3.12
PDS5A-202ENST00000503396 EHMT2Q96KQ7 1210 aa34.45■■■■□ 3.1
PDS5A-202ENST00000503396 NEUROD1Q13562 356 aa34.44■■■■□ 3.1
PDS5A-202ENST00000503396 BAZ1AQ9NRL2 1556 aaPredicted RBP34.36■■■■□ 3.09
PDS5A-202ENST00000503396 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.34■■■■□ 3.09
PDS5A-202ENST00000503396 WIZO95785 1651 aa34.3■■■■□ 3.08
PDS5A-202ENST00000503396 CCER1Q8TC90 406 aaPredicted RBP34.27■■■■□ 3.08
PDS5A-202ENST00000503396 SMARCA4P51532 1647 aa34.25■■■■□ 3.07
PDS5A-202ENST00000503396 GTF3C3Q9Y5Q9 886 aa34.18■■■■□ 3.06
PDS5A-202ENST00000503396 DIEXFQ68CQ4 756 aaKnown RBP34.16■■■■□ 3.06
PDS5A-202ENST00000503396 CENPBP07199 599 aaPredicted RBP34.14■■■■□ 3.06
PDS5A-202ENST00000503396 MYT1Q01538 1121 aa34.11■■■■□ 3.05
PDS5A-202ENST00000503396 WRNQ14191 1432 aaPredicted RBP eCLIP33.84■■■■□ 3.01
PDS5A-202ENST00000503396 EIF4G1Q04637 1599 aaKnown RBP33.82■■■■□ 3
PDS5A-202ENST00000503396 TOP2AP11388 1531 aaKnown RBP33.77■■■■□ 3
PDS5A-202ENST00000503396 PEG3Q9GZU2 1588 aa33.73■■■□□ 2.99
PDS5A-202ENST00000503396 ATAD2BQ9ULI0 1458 aa33.71■■■□□ 2.99
PDS5A-202ENST00000503396 ZNF316A6NFI3 1004 aaPredicted RBP33.66■■■□□ 2.98
PDS5A-202ENST00000503396 CEP162Q5TB80 1403 aa33.61■■■□□ 2.97
PDS5A-202ENST00000503396 TTBK1Q5TCY1 1321 aaPredicted RBP33.59■■■□□ 2.97
PDS5A-202ENST00000503396 SMARCA2P51531 1590 aa33.57■■■□□ 2.96
PDS5A-202ENST00000503396 CCDC88BA6NC98 1476 aa33.56■■■□□ 2.96
PDS5A-202ENST00000503396 BAZ1BQ9UIG0 1483 aaKnown RBP33.5■■■□□ 2.95
PDS5A-202ENST00000503396 TNIKQ9UKE5 1360 aa33.48■■■□□ 2.95
PDS5A-202ENST00000503396 ABCC8Q09428 1581 aa33.44■■■□□ 2.94
PDS5A-202ENST00000503396 YTHDC1Q96MU7 727 aaKnown RBP33.41■■■□□ 2.94
PDS5A-202ENST00000503396 SOGA1O94964 1423 aa33.34■■■□□ 2.93
PDS5A-202ENST00000503396 NCAPD3P42695 1498 aa33.34■■■□□ 2.93
PDS5A-202ENST00000503396 MIER1Q8N108 512 aa33.33■■■□□ 2.93
PDS5A-202ENST00000503396 CC2D2AQ9P2K1 1620 aa33.25■■■□□ 2.91
PDS5A-202ENST00000503396 EEA1Q15075 1411 aa33.24■■■□□ 2.91
PDS5A-202ENST00000503396 HMGXB3Q12766 1538 aa33.22■■■□□ 2.91
PDS5A-202ENST00000503396 CSRNP3Q8WYN3 585 aa33.2■■■□□ 2.91
PDS5A-202ENST00000503396 UBTFP17480 764 aaKnown RBP33.15■■■□□ 2.9
PDS5A-202ENST00000503396 RUSC2Q8N2Y8 1516 aa33.14■■■□□ 2.9
PDS5A-202ENST00000503396 GOLGA3Q08378 1498 aa33.1■■■□□ 2.89
PDS5A-202ENST00000503396 HNRNPUL2Q1KMD3 747 aaKnown RBP33.02■■■□□ 2.88
PDS5A-202ENST00000503396 CEP164Q9UPV0 1460 aa32.8■■■□□ 2.84
PDS5A-202ENST00000503396 CLSPNQ9HAW4 1339 aa32.79■■■□□ 2.84
PDS5A-202ENST00000503396 CLIP1P30622 1438 aa32.77■■■□□ 2.84
PDS5A-202ENST00000503396 KIF21BO75037 1637 aa32.76■■■□□ 2.84
PDS5A-202ENST00000503396 VPS8Q8N3P4 1428 aa32.76■■■□□ 2.83
PDS5A-202ENST00000503396 DNAJC5BQ9UF47 199 aa32.74■■■□□ 2.83
PDS5A-202ENST00000503396 SUPT16HQ9Y5B9 1047 aaKnown RBP32.7■■■□□ 2.83
PDS5A-202ENST00000503396 CFTRP13569 1480 aa32.65■■■□□ 2.82
PDS5A-202ENST00000503396 APLP2Q06481 763 aa32.58■■■□□ 2.81
PDS5A-202ENST00000503396 SYNJ1O43426 1573 aa32.56■■■□□ 2.8
PDS5A-202ENST00000503396 CADPSQ9ULU8 1353 aa32.55■■■□□ 2.8
PDS5A-202ENST00000503396 DHX57Q6P158 1386 aaKnown RBP32.54■■■□□ 2.8
PDS5A-202ENST00000503396 RAPGEF2Q9Y4G8 1499 aa32.47■■■□□ 2.79
PDS5A-202ENST00000503396 TSHZ2Q9NRE2 1034 aa32.45■■■□□ 2.79
PDS5A-202ENST00000503396 NESP48681 1621 aa32.41■■■□□ 2.78
PDS5A-202ENST00000503396 PRDM2Q13029 1718 aa32.38■■■□□ 2.77
PDS5A-202ENST00000503396 ANP32EQ9BTT0 268 aa32.31■■■□□ 2.76
PDS5A-202ENST00000503396 TOP2BQ02880 1626 aa32.29■■■□□ 2.76
PDS5A-202ENST00000503396 CUX1P39880 1505 aa32.27■■■□□ 2.76
PDS5A-202ENST00000503396 RANGAP1P46060 587 aaPredicted RBP32.27■■■□□ 2.76
PDS5A-202ENST00000503396 BIVM-ERCC5R4GMW8 1640 aa32.21■■■□□ 2.75
PDS5A-202ENST00000503396 FANCD2Q9BXW9 1451 aa32.21■■■□□ 2.75
PDS5A-202ENST00000503396 ARAP1Q96P48 1450 aa32.16■■■□□ 2.74
PDS5A-202ENST00000503396 RRBP1Q9P2E9 1410 aaKnown RBP32.16■■■□□ 2.74
PDS5A-202ENST00000503396 CUX2O14529 1486 aa32.15■■■□□ 2.74
PDS5A-202ENST00000503396 LAMC3Q9Y6N6 1575 aa32.15■■■□□ 2.74
PDS5A-202ENST00000503396 KANK4Q5T7N3 995 aaPredicted RBP32.14■■■□□ 2.74
PDS5A-202ENST00000503396 KCNH8Q96L42 1107 aa32.07■■■□□ 2.72
PDS5A-202ENST00000503396 ERICH3Q5RHP9 1530 aa32.07■■■□□ 2.72
PDS5A-202ENST00000503396 PRXQ9BXM0 1461 aa32.03■■■□□ 2.72
PDS5A-202ENST00000503396 CCNB3Q8WWL7 1395 aa31.95■■■□□ 2.7
PDS5A-202ENST00000503396 PDS5BQ9NTI5 1447 aa31.94■■■□□ 2.7
PDS5A-202ENST00000503396 KIF21AQ7Z4S6 1674 aa31.91■■■□□ 2.7
PDS5A-202ENST00000503396 BCANQ96GW7 911 aa31.9■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 376 ms