RNA–Protein interactions for RNA: ENST00000289269.6

PCDHAC2-201, Transcript of protocadherin alpha subfamily C, 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHAC2, Length 5,963 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2-201ENST00000289269 DCAF8L2P0C7V8 631 aa31.24■■■□□ 2.59
PCDHAC2-201ENST00000289269 SUPT5HO00267 1087 aaKnown RBP29.67■■■□□ 2.34
PCDHAC2-201ENST00000289269 PELP1Q8IZL8 1130 aaKnown RBP29.43■■■□□ 2.3
PCDHAC2-201ENST00000289269 EHMT2Q96KQ7 1210 aa29.36■■■□□ 2.29
PCDHAC2-201ENST00000289269 SHROOM4Q9ULL8 1493 aa28.89■■■□□ 2.22
PCDHAC2-201ENST00000289269 APLP2Q06481 763 aa28.65■■■□□ 2.18
PCDHAC2-201ENST00000289269 ERICH6Q7L0X2 663 aa28.47■■■□□ 2.15
PCDHAC2-201ENST00000289269 TTBK1Q5TCY1 1321 aaPredicted RBP28.42■■■□□ 2.14
PCDHAC2-201ENST00000289269 FAM9AQ8IZU1 332 aaPredicted RBP28.2■■■□□ 2.1
PCDHAC2-201ENST00000289269 CCER1Q8TC90 406 aaPredicted RBP28.11■■■□□ 2.09
PCDHAC2-201ENST00000289269 PCGF6Q9BYE7 350 aa28.09■■■□□ 2.09
PCDHAC2-201ENST00000289269 CENPBP07199 599 aaPredicted RBP28.02■■■□□ 2.08
PCDHAC2-201ENST00000289269 RANGAP1P46060 587 aaPredicted RBP27.93■■■□□ 2.06
PCDHAC2-201ENST00000289269 NISCHQ9Y2I1 1504 aa27.79■■■□□ 2.04
PCDHAC2-201ENST00000289269 ATP1B4Q9UN42 357 aaPredicted RBP27.7■■■□□ 2.03
PCDHAC2-201ENST00000289269 YTHDC1Q96MU7 727 aaKnown RBP27.61■■■□□ 2.01
PCDHAC2-201ENST00000289269 NEFLP07196 543 aa27.6■■■□□ 2.01
PCDHAC2-201ENST00000289269 ZEB1P37275 1124 aaPredicted RBP27.58■■■□□ 2.01
PCDHAC2-201ENST00000289269 MYT1Q01538 1121 aa27.31■■□□□ 1.96
PCDHAC2-201ENST00000289269 TRIM41Q8WV44 630 aa27.31■■□□□ 1.96
PCDHAC2-201ENST00000289269 UBTFP17480 764 aaKnown RBP27.23■■□□□ 1.95
PCDHAC2-201ENST00000289269 DAXXQ9UER7 740 aaPredicted RBP27.07■■□□□ 1.92
PCDHAC2-201ENST00000289269 PPARGC1BQ86YN6 1023 aaKnown RBP27.02■■□□□ 1.92
PCDHAC2-201ENST00000289269 POLR3GLQ9BT43 218 aa26.9■■□□□ 1.9
PCDHAC2-201ENST00000289269 MYT1LQ9UL68 1186 aa26.74■■□□□ 1.87
PCDHAC2-201ENST00000289269 CNGB1Q14028 1251 aaPredicted RBP26.71■■□□□ 1.87
PCDHAC2-201ENST00000289269 ITGAEP38570 1179 aa26.69■■□□□ 1.86
PCDHAC2-201ENST00000289269 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.55■■□□□ 1.84
PCDHAC2-201ENST00000289269 HNRNPUL2Q1KMD3 747 aaKnown RBP26.55■■□□□ 1.84
PCDHAC2-201ENST00000289269 TRIM26Q12899 539 aaPredicted RBP26.53■■□□□ 1.84
PCDHAC2-201ENST00000289269 HRCP23327 699 aa26.46■■□□□ 1.83
PCDHAC2-201ENST00000289269 CHIC1Q5VXU3 224 aa26.45■■□□□ 1.82
PCDHAC2-201ENST00000289269 ZNF316A6NFI3 1004 aaPredicted RBP26.44■■□□□ 1.82
PCDHAC2-201ENST00000289269 SLC4A1APQ9BWU0 796 aaKnown RBP26.42■■□□□ 1.82
PCDHAC2-201ENST00000289269 RTL5Q5HYW3 569 aaPredicted RBP26.39■■□□□ 1.82
PCDHAC2-201ENST00000289269 CLSPNQ9HAW4 1339 aa26.36■■□□□ 1.81
PCDHAC2-201ENST00000289269 LOC105371045A0A1W2PR82 267 aa26.04■■□□□ 1.76
PCDHAC2-201ENST00000289269 DIEXFQ68CQ4 756 aaKnown RBP25.97■■□□□ 1.75
PCDHAC2-201ENST00000289269 BCANQ96GW7 911 aa25.95■■□□□ 1.74
PCDHAC2-201ENST00000289269 FAM50AQ14320 339 aaKnown RBP25.82■■□□□ 1.72
PCDHAC2-201ENST00000289269 TRIM52Q96A61 297 aa25.79■■□□□ 1.72
PCDHAC2-201ENST00000289269 NEUROD1Q13562 356 aa25.75■■□□□ 1.71
PCDHAC2-201ENST00000289269 BCL11AQ9H165 835 aa25.75■■□□□ 1.71
PCDHAC2-201ENST00000289269 ZBTB47Q9UFB7 747 aaPredicted RBP25.75■■□□□ 1.71
PCDHAC2-201ENST00000289269 CDK11AQ9UQ88 783 aaPredicted RBP25.67■■□□□ 1.7
PCDHAC2-201ENST00000289269 ZNF326Q5BKZ1 582 aaKnown RBP25.66■■□□□ 1.7
PCDHAC2-201ENST00000289269 SLC24A1O60721 1099 aa25.64■■□□□ 1.69
PCDHAC2-201ENST00000289269 GTF3C3Q9Y5Q9 886 aa25.62■■□□□ 1.69
PCDHAC2-201ENST00000289269 CANXP27824 592 aaKnown RBP25.58■■□□□ 1.68
PCDHAC2-201ENST00000289269 ANP32CO43423 234 aa25.57■■□□□ 1.68
PCDHAC2-201ENST00000289269 NPM2Q86SE8 214 aaKnown RBP25.34■■□□□ 1.65
PCDHAC2-201ENST00000289269 ANP32AP39687 249 aaKnown RBP25.31■■□□□ 1.64
PCDHAC2-201ENST00000289269 NEFMP07197 916 aa25.29■■□□□ 1.64
PCDHAC2-201ENST00000289269 EIF5BO60841 1220 aaKnown RBP25.23■■□□□ 1.63
PCDHAC2-201ENST00000289269 ANP32BQ92688 251 aaKnown RBP25.12■■□□□ 1.61
PCDHAC2-201ENST00000289269 FBLN2P98095 1184 aa25.11■■□□□ 1.61
PCDHAC2-201ENST00000289269 HSP90AA1P07900 732 aaKnown RBP25.06■■□□□ 1.6
PCDHAC2-201ENST00000289269 ARID3CA6NKF2 412 aa25.05■■□□□ 1.6
PCDHAC2-201ENST00000289269 ACIN1Q9UKV3 1341 aaKnown RBP25.01■■□□□ 1.59
PCDHAC2-201ENST00000289269 FKBP8Q14318 412 aa24.93■■□□□ 1.58
PCDHAC2-201ENST00000289269 P3H3Q8IVL6 736 aa24.92■■□□□ 1.58
PCDHAC2-201ENST00000289269 ZNF777Q9ULD5 760 aaPredicted RBP24.9■■□□□ 1.58
PCDHAC2-201ENST00000289269 PABPN1Q86U42 306 aaKnown RBP eCLIP24.89■■□□□ 1.57
PCDHAC2-201ENST00000289269 UPF2Q9HAU5 1272 aaKnown RBP24.87■■□□□ 1.57
PCDHAC2-201ENST00000289269 ARXQ96QS3 562 aa24.85■■□□□ 1.57
PCDHAC2-201ENST00000289269 GLIPR1L2Q4G1C9 344 aa24.79■■□□□ 1.56
PCDHAC2-201ENST00000289269 NBR1Q14596 966 aa24.78■■□□□ 1.56
PCDHAC2-201ENST00000289269 SALL2Q9Y467 1007 aaPredicted RBP24.78■■□□□ 1.56
PCDHAC2-201ENST00000289269 HNRNPUQ00839 825 aaKnown RBP eCLIP24.75■■□□□ 1.55
PCDHAC2-201ENST00000289269 FAM9BQ8IZU0 186 aa24.75■■□□□ 1.55
PCDHAC2-201ENST00000289269 CHGAP10645 457 aaKnown RBP24.74■■□□□ 1.55
PCDHAC2-201ENST00000289269 PLPPR3Q6T4P5 718 aa24.73■■□□□ 1.55
PCDHAC2-201ENST00000289269 ESF1Q9H501 851 aaKnown RBP24.68■■□□□ 1.54
PCDHAC2-201ENST00000289269 STAG3Q9UJ98 1225 aa24.68■■□□□ 1.54
PCDHAC2-201ENST00000289269 TONSLQ96HA7 1378 aa24.62■■□□□ 1.53
PCDHAC2-201ENST00000289269 CCDC136Q96JN2 1154 aa24.6■■□□□ 1.53
PCDHAC2-201ENST00000289269 DDX10Q13206 875 aaKnown RBP24.58■■□□□ 1.53
PCDHAC2-201ENST00000289269 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.56■■□□□ 1.52
PCDHAC2-201ENST00000289269 CDK11BP21127 795 aaKnown RBP24.49■■□□□ 1.51
PCDHAC2-201ENST00000289269 TMC1Q8TDI8 760 aa24.48■■□□□ 1.51
PCDHAC2-201ENST00000289269 ABCC9O60706 1549 aa24.47■■□□□ 1.51
PCDHAC2-201ENST00000289269 WDR43Q15061 677 aaKnown RBP eCLIP24.47■■□□□ 1.51
PCDHAC2-201ENST00000289269 IRX6P78412 446 aaPredicted RBP24.44■■□□□ 1.5
PCDHAC2-201ENST00000289269 CSRNP3Q8WYN3 585 aa24.42■■□□□ 1.5
PCDHAC2-201ENST00000289269 SCAF1Q9H7N4 1312 aaKnown RBP24.41■■□□□ 1.5
PCDHAC2-201ENST00000289269 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.39■■□□□ 1.5
PCDHAC2-201ENST00000289269 A0A0G2JS52 829 aa24.38■■□□□ 1.49
PCDHAC2-201ENST00000289269 MYH16Q9H6N6 1097 aa24.37■■□□□ 1.49
PCDHAC2-201ENST00000289269 MRS2Q9HD23 443 aa24.34■■□□□ 1.49
PCDHAC2-201ENST00000289269 CHIC2Q9UKJ5 165 aa24.34■■□□□ 1.49
PCDHAC2-201ENST00000289269 KDM2AQ9Y2K7 1162 aa24.31■■□□□ 1.48
PCDHAC2-201ENST00000289269 ZBTB7CA1YPR0 619 aa24.29■■□□□ 1.48
PCDHAC2-201ENST00000289269 TRIM44Q96DX7 344 aaPredicted RBP24.26■■□□□ 1.47
PCDHAC2-201ENST00000289269 PLEKHG5O94827 1062 aa24.26■■□□□ 1.47
PCDHAC2-201ENST00000289269 NCLP19338 710 aaKnown RBP24.25■■□□□ 1.47
PCDHAC2-201ENST00000289269 SENP3Q9H4L4 574 aaPredicted RBP24.22■■□□□ 1.47
PCDHAC2-201ENST00000289269 BECN1Q14457 450 aa24.19■■□□□ 1.46
PCDHAC2-201ENST00000289269 TPRNQ4KMQ1 711 aa24.19■■□□□ 1.46
PCDHAC2-201ENST00000289269 HIRIP3Q9BW71 556 aaPredicted RBP24.19■■□□□ 1.46
PCDHAC2-201ENST00000289269 NPM1P06748 294 aaKnown RBP eCLIP24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms