RNA–Protein interactions for RNA: ENST00000405472.7

NRXN1-208, Transcript of neurexin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NRXN1, Length 5,724 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-208ENST00000405472 DCAF8L2P0C7V8 631 aa32.67■■■□□ 2.82
NRXN1-208ENST00000405472 SUPT5HO00267 1087 aaKnown RBP31.04■■■□□ 2.56
NRXN1-208ENST00000405472 NISCHQ9Y2I1 1504 aa30.66■■■□□ 2.5
NRXN1-208ENST00000405472 SHROOM4Q9ULL8 1493 aa30.46■■■□□ 2.47
NRXN1-208ENST00000405472 EHMT2Q96KQ7 1210 aa30.25■■■□□ 2.43
NRXN1-208ENST00000405472 PELP1Q8IZL8 1130 aaKnown RBP29.92■■■□□ 2.38
NRXN1-208ENST00000405472 APLP2Q06481 763 aa29.74■■■□□ 2.35
NRXN1-208ENST00000405472 FAM9AQ8IZU1 332 aaPredicted RBP29.35■■■□□ 2.29
NRXN1-208ENST00000405472 TTBK1Q5TCY1 1321 aaPredicted RBP29.26■■■□□ 2.28
NRXN1-208ENST00000405472 PCGF6Q9BYE7 350 aa29.08■■■□□ 2.25
NRXN1-208ENST00000405472 RANGAP1P46060 587 aaPredicted RBP28.91■■■□□ 2.22
NRXN1-208ENST00000405472 CENPBP07199 599 aaPredicted RBP28.76■■■□□ 2.19
NRXN1-208ENST00000405472 TRIM41Q8WV44 630 aa28.74■■■□□ 2.19
NRXN1-208ENST00000405472 ERICH6Q7L0X2 663 aa28.74■■■□□ 2.19
NRXN1-208ENST00000405472 ZEB1P37275 1124 aaPredicted RBP28.72■■■□□ 2.19
NRXN1-208ENST00000405472 CCER1Q8TC90 406 aaPredicted RBP28.7■■■□□ 2.19
NRXN1-208ENST00000405472 ATP1B4Q9UN42 357 aaPredicted RBP28.7■■■□□ 2.18
NRXN1-208ENST00000405472 UBTFP17480 764 aaKnown RBP28.48■■■□□ 2.15
NRXN1-208ENST00000405472 NEFLP07196 543 aa28.24■■■□□ 2.11
NRXN1-208ENST00000405472 YTHDC1Q96MU7 727 aaKnown RBP28.2■■■□□ 2.11
NRXN1-208ENST00000405472 PPARGC1BQ86YN6 1023 aaKnown RBP28.03■■■□□ 2.08
NRXN1-208ENST00000405472 TRIM26Q12899 539 aaPredicted RBP27.82■■■□□ 2.04
NRXN1-208ENST00000405472 ITGAEP38570 1179 aa27.67■■■□□ 2.02
NRXN1-208ENST00000405472 MYT1Q01538 1121 aa27.66■■■□□ 2.02
NRXN1-208ENST00000405472 MYT1LQ9UL68 1186 aa27.64■■■□□ 2.02
NRXN1-208ENST00000405472 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.62■■■□□ 2.01
NRXN1-208ENST00000405472 HNRNPUL2Q1KMD3 747 aaKnown RBP27.62■■■□□ 2.01
NRXN1-208ENST00000405472 POLR3GLQ9BT43 218 aa27.6■■■□□ 2.01
NRXN1-208ENST00000405472 DAXXQ9UER7 740 aaPredicted RBP27.51■■□□□ 1.99
NRXN1-208ENST00000405472 HRCP23327 699 aa27.48■■□□□ 1.99
NRXN1-208ENST00000405472 LOC105371045A0A1W2PR82 267 aa27.4■■□□□ 1.98
NRXN1-208ENST00000405472 CNGB1Q14028 1251 aaPredicted RBP27.3■■□□□ 1.96
NRXN1-208ENST00000405472 CHIC1Q5VXU3 224 aa27.25■■□□□ 1.95
NRXN1-208ENST00000405472 SLC4A1APQ9BWU0 796 aaKnown RBP27.12■■□□□ 1.93
NRXN1-208ENST00000405472 FAM50AQ14320 339 aaKnown RBP26.96■■□□□ 1.91
NRXN1-208ENST00000405472 DIEXFQ68CQ4 756 aaKnown RBP26.93■■□□□ 1.9
NRXN1-208ENST00000405472 ZNF316A6NFI3 1004 aaPredicted RBP26.89■■□□□ 1.9
NRXN1-208ENST00000405472 CLSPNQ9HAW4 1339 aa26.88■■□□□ 1.89
NRXN1-208ENST00000405472 TRIM52Q96A61 297 aa26.85■■□□□ 1.89
NRXN1-208ENST00000405472 RTL5Q5HYW3 569 aaPredicted RBP26.81■■□□□ 1.88
NRXN1-208ENST00000405472 NEUROD1Q13562 356 aa26.75■■□□□ 1.87
NRXN1-208ENST00000405472 PABPN1Q86U42 306 aaKnown RBP eCLIP26.66■■□□□ 1.86
NRXN1-208ENST00000405472 ABCC9O60706 1549 aa26.58■■□□□ 1.85
NRXN1-208ENST00000405472 ZNF326Q5BKZ1 582 aaKnown RBP26.56■■□□□ 1.84
NRXN1-208ENST00000405472 ANP32CO43423 234 aa26.53■■□□□ 1.84
NRXN1-208ENST00000405472 BCANQ96GW7 911 aa26.53■■□□□ 1.84
NRXN1-208ENST00000405472 ZBTB47Q9UFB7 747 aaPredicted RBP26.38■■□□□ 1.81
NRXN1-208ENST00000405472 FBLN2P98095 1184 aa26.38■■□□□ 1.81
NRXN1-208ENST00000405472 GTF3C3Q9Y5Q9 886 aa26.38■■□□□ 1.81
NRXN1-208ENST00000405472 CDK11AQ9UQ88 783 aaPredicted RBP26.36■■□□□ 1.81
NRXN1-208ENST00000405472 CANXP27824 592 aaKnown RBP26.28■■□□□ 1.8
NRXN1-208ENST00000405472 SLC24A1O60721 1099 aa26.21■■□□□ 1.79
NRXN1-208ENST00000405472 P3H3Q8IVL6 736 aa26.19■■□□□ 1.78
NRXN1-208ENST00000405472 ARID3CA6NKF2 412 aa26.17■■□□□ 1.78
NRXN1-208ENST00000405472 BCL11AQ9H165 835 aa26.15■■□□□ 1.78
NRXN1-208ENST00000405472 NEFMP07197 916 aa26.14■■□□□ 1.77
NRXN1-208ENST00000405472 ZNF777Q9ULD5 760 aaPredicted RBP26.05■■□□□ 1.76
NRXN1-208ENST00000405472 CSRNP3Q8WYN3 585 aa26.04■■□□□ 1.76
NRXN1-208ENST00000405472 ANP32AP39687 249 aaKnown RBP25.95■■□□□ 1.74
NRXN1-208ENST00000405472 ACIN1Q9UKV3 1341 aaKnown RBP25.93■■□□□ 1.74
NRXN1-208ENST00000405472 NPM2Q86SE8 214 aaKnown RBP25.85■■□□□ 1.73
NRXN1-208ENST00000405472 TONSLQ96HA7 1378 aa25.8■■□□□ 1.72
NRXN1-208ENST00000405472 ESF1Q9H501 851 aaKnown RBP25.75■■□□□ 1.71
NRXN1-208ENST00000405472 CHGAP10645 457 aaKnown RBP25.72■■□□□ 1.71
NRXN1-208ENST00000405472 FKBP8Q14318 412 aa25.71■■□□□ 1.71
NRXN1-208ENST00000405472 SCRIBQ14160 1630 aa25.7■■□□□ 1.71
NRXN1-208ENST00000405472 STAG3Q9UJ98 1225 aa25.68■■□□□ 1.7
NRXN1-208ENST00000405472 HNRNPUQ00839 825 aaKnown RBP eCLIP25.64■■□□□ 1.7
NRXN1-208ENST00000405472 FAM9BQ8IZU0 186 aa25.62■■□□□ 1.69
NRXN1-208ENST00000405472 HSP90AA1P07900 732 aaKnown RBP25.6■■□□□ 1.69
NRXN1-208ENST00000405472 DDX10Q13206 875 aaKnown RBP25.58■■□□□ 1.69
NRXN1-208ENST00000405472 ANP32BQ92688 251 aaKnown RBP25.58■■□□□ 1.69
NRXN1-208ENST00000405472 UPF2Q9HAU5 1272 aaKnown RBP25.57■■□□□ 1.68
NRXN1-208ENST00000405472 PLPPR3Q6T4P5 718 aa25.53■■□□□ 1.68
NRXN1-208ENST00000405472 SALL2Q9Y467 1007 aaPredicted RBP25.52■■□□□ 1.68
NRXN1-208ENST00000405472 CHIC2Q9UKJ5 165 aa25.52■■□□□ 1.68
NRXN1-208ENST00000405472 DCAF1Q9Y4B6 1507 aa25.51■■□□□ 1.67
NRXN1-208ENST00000405472 NPM1P06748 294 aaKnown RBP eCLIP25.5■■□□□ 1.67
NRXN1-208ENST00000405472 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.49■■□□□ 1.67
NRXN1-208ENST00000405472 TMC1Q8TDI8 760 aa25.45■■□□□ 1.66
NRXN1-208ENST00000405472 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.41■■□□□ 1.66
NRXN1-208ENST00000405472 WDR43Q15061 677 aaKnown RBP eCLIP25.41■■□□□ 1.66
NRXN1-208ENST00000405472 CCDC136Q96JN2 1154 aa25.39■■□□□ 1.65
NRXN1-208ENST00000405472 KDM2AQ9Y2K7 1162 aa25.34■■□□□ 1.65
NRXN1-208ENST00000405472 ZCCHC6Q5VYS8 1495 aaKnown RBP25.34■■□□□ 1.65
NRXN1-208ENST00000405472 EIF5BO60841 1220 aaKnown RBP25.32■■□□□ 1.64
NRXN1-208ENST00000405472 MRS2Q9HD23 443 aa25.32■■□□□ 1.64
NRXN1-208ENST00000405472 TSPY4P0CV99 314 aa25.31■■□□□ 1.64
NRXN1-208ENST00000405472 TSPY10P0CW01 314 aa25.31■■□□□ 1.64
NRXN1-208ENST00000405472 MTUS2Q5JR59 1369 aa25.31■■□□□ 1.64
NRXN1-208ENST00000405472 NBR1Q14596 966 aa25.23■■□□□ 1.63
NRXN1-208ENST00000405472 CLIP1P30622 1438 aa25.17■■□□□ 1.62
NRXN1-208ENST00000405472 CHMP7Q8WUX9 453 aaPredicted RBP25.17■■□□□ 1.62
NRXN1-208ENST00000405472 IRX6P78412 446 aaPredicted RBP25.15■■□□□ 1.62
NRXN1-208ENST00000405472 HIRIP3Q9BW71 556 aaPredicted RBP25.15■■□□□ 1.62
NRXN1-208ENST00000405472 MYH16Q9H6N6 1097 aa25.15■■□□□ 1.62
NRXN1-208ENST00000405472 SCAF1Q9H7N4 1312 aaKnown RBP25.15■■□□□ 1.62
NRXN1-208ENST00000405472 ARXQ96QS3 562 aa25.14■■□□□ 1.62
NRXN1-208ENST00000405472 MIER1Q8N108 512 aa25.13■■□□□ 1.61
NRXN1-208ENST00000405472 EIF4G2P78344 907 aaKnown RBP eCLIP25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms