RNA–Protein interactions for RNA: ENST00000329759.5

FAM43A-201, Transcript of family with sequence similarity 43 member A, humanhuman

APPRIS P1 BASIC

Gene FAM43A, Length 2,494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM43A-201ENST00000329759 NISCHQ9Y2I1 1504 aa44.72■■■■■ 4.75
FAM43A-201ENST00000329759 SHROOM4Q9ULL8 1493 aa38.54■■■■□ 3.76
FAM43A-201ENST00000329759 SUPT5HO00267 1087 aaKnown RBP38.08■■■■□ 3.69
FAM43A-201ENST00000329759 ZCCHC6Q5VYS8 1495 aaKnown RBP38■■■■□ 3.67
FAM43A-201ENST00000329759 CCDC180Q9P1Z9 1646 aa37.79■■■■□ 3.64
FAM43A-201ENST00000329759 MYO15BQ96JP2 1530 aa37.53■■■■□ 3.6
FAM43A-201ENST00000329759 HRCP23327 699 aa37.45■■■■□ 3.59
FAM43A-201ENST00000329759 CHIC1Q5VXU3 224 aa37.39■■■■□ 3.58
FAM43A-201ENST00000329759 DCAF8L2P0C7V8 631 aa37.08■■■■□ 3.53
FAM43A-201ENST00000329759 PCGF6Q9BYE7 350 aa36.9■■■■□ 3.5
FAM43A-201ENST00000329759 DCAF1Q9Y4B6 1507 aa36.73■■■■□ 3.47
FAM43A-201ENST00000329759 PPARGC1BQ86YN6 1023 aaKnown RBP36.5■■■■□ 3.43
FAM43A-201ENST00000329759 LOC105371045A0A1W2PR82 267 aa36.27■■■■□ 3.4
FAM43A-201ENST00000329759 TRIM26Q12899 539 aaPredicted RBP36.08■■■■□ 3.37
FAM43A-201ENST00000329759 ABCC9O60706 1549 aa36.04■■■■□ 3.36
FAM43A-201ENST00000329759 PELP1Q8IZL8 1130 aaKnown RBP35.97■■■■□ 3.35
FAM43A-201ENST00000329759 RSF1Q96T23 1441 aaPredicted RBP35.63■■■■□ 3.29
FAM43A-201ENST00000329759 ZEB1P37275 1124 aaPredicted RBP35.62■■■■□ 3.29
FAM43A-201ENST00000329759 SCRIBQ14160 1630 aa35.57■■■■□ 3.28
FAM43A-201ENST00000329759 RB1CC1Q8TDY2 1594 aa35.44■■■■□ 3.26
FAM43A-201ENST00000329759 TRIM41Q8WV44 630 aa35.43■■■■□ 3.26
FAM43A-201ENST00000329759 FAM9AQ8IZU1 332 aaPredicted RBP35.15■■■■□ 3.22
FAM43A-201ENST00000329759 NACADO15069 1562 aa34.98■■■■□ 3.19
FAM43A-201ENST00000329759 SCAF1Q9H7N4 1312 aaKnown RBP34.92■■■■□ 3.18
FAM43A-201ENST00000329759 CECR2Q9BXF3 1484 aa34.82■■■■□ 3.16
FAM43A-201ENST00000329759 EHMT2Q96KQ7 1210 aa34.8■■■■□ 3.16
FAM43A-201ENST00000329759 MROH2BQ7Z745 1585 aa34.8■■■■□ 3.16
FAM43A-201ENST00000329759 MYT1Q01538 1121 aa34.78■■■■□ 3.16
FAM43A-201ENST00000329759 WIZO95785 1651 aa34.69■■■■□ 3.14
FAM43A-201ENST00000329759 EIF4G1Q04637 1599 aaKnown RBP34.6■■■■□ 3.13
FAM43A-201ENST00000329759 BAZ1AQ9NRL2 1556 aaPredicted RBP34.58■■■■□ 3.13
FAM43A-201ENST00000329759 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.47■■■■□ 3.11
FAM43A-201ENST00000329759 CCER1Q8TC90 406 aaPredicted RBP34.44■■■■□ 3.1
FAM43A-201ENST00000329759 ACIN1Q9UKV3 1341 aaKnown RBP34.37■■■■□ 3.09
FAM43A-201ENST00000329759 WRNQ14191 1432 aaPredicted RBP eCLIP34.29■■■■□ 3.08
FAM43A-201ENST00000329759 NEUROD1Q13562 356 aa34.23■■■■□ 3.07
FAM43A-201ENST00000329759 DIEXFQ68CQ4 756 aaKnown RBP34.16■■■■□ 3.06
FAM43A-201ENST00000329759 TOP2AP11388 1531 aaKnown RBP34.15■■■■□ 3.06
FAM43A-201ENST00000329759 ABCC8Q09428 1581 aa34.14■■■■□ 3.06
FAM43A-201ENST00000329759 CEP162Q5TB80 1403 aa34.11■■■■□ 3.05
FAM43A-201ENST00000329759 CCDC88BA6NC98 1476 aa34.11■■■■□ 3.05
FAM43A-201ENST00000329759 UNC13AQ9UPW8 1703 aa34.09■■■■□ 3.05
FAM43A-201ENST00000329759 CENPBP07199 599 aaPredicted RBP34.07■■■■□ 3.04
FAM43A-201ENST00000329759 TNIKQ9UKE5 1360 aa33.99■■■■□ 3.03
FAM43A-201ENST00000329759 SMARCA2P51531 1590 aa33.99■■■■□ 3.03
FAM43A-201ENST00000329759 SMARCA4P51532 1647 aa33.96■■■■□ 3.03
FAM43A-201ENST00000329759 GTF3C3Q9Y5Q9 886 aa33.96■■■■□ 3.03
FAM43A-201ENST00000329759 SOGA1O94964 1423 aa33.91■■■■□ 3.02
FAM43A-201ENST00000329759 TTBK1Q5TCY1 1321 aaPredicted RBP33.9■■■■□ 3.02
FAM43A-201ENST00000329759 EEA1Q15075 1411 aa33.9■■■■□ 3.02
FAM43A-201ENST00000329759 PABPN1Q86U42 306 aaKnown RBP eCLIP33.86■■■■□ 3.01
FAM43A-201ENST00000329759 ZNF316A6NFI3 1004 aaPredicted RBP33.74■■■□□ 2.99
FAM43A-201ENST00000329759 CSRNP3Q8WYN3 585 aa33.73■■■□□ 2.99
FAM43A-201ENST00000329759 GOLGA3Q08378 1498 aa33.71■■■□□ 2.99
FAM43A-201ENST00000329759 RUSC2Q8N2Y8 1516 aa33.71■■■□□ 2.99
FAM43A-201ENST00000329759 BICRAQ9NZM4 1560 aa33.65■■■□□ 2.98
FAM43A-201ENST00000329759 UBTFP17480 764 aaKnown RBP33.64■■■□□ 2.98
FAM43A-201ENST00000329759 KIF21BO75037 1637 aa33.46■■■□□ 2.95
FAM43A-201ENST00000329759 CEP164Q9UPV0 1460 aa33.44■■■□□ 2.94
FAM43A-201ENST00000329759 YTHDC1Q96MU7 727 aaKnown RBP33.36■■■□□ 2.93
FAM43A-201ENST00000329759 SYNJ1O43426 1573 aa33.32■■■□□ 2.93
FAM43A-201ENST00000329759 MIER1Q8N108 512 aa33.32■■■□□ 2.92
FAM43A-201ENST00000329759 CLIP1P30622 1438 aa33.32■■■□□ 2.92
FAM43A-201ENST00000329759 HNRNPUL2Q1KMD3 747 aaKnown RBP33.31■■■□□ 2.92
FAM43A-201ENST00000329759 VPS8Q8N3P4 1428 aa33.29■■■□□ 2.92
FAM43A-201ENST00000329759 PEG3Q9GZU2 1588 aa33.28■■■□□ 2.92
FAM43A-201ENST00000329759 BAZ1BQ9UIG0 1483 aaKnown RBP33.23■■■□□ 2.91
FAM43A-201ENST00000329759 RAPGEF2Q9Y4G8 1499 aa33.07■■■□□ 2.88
FAM43A-201ENST00000329759 ATAD2BQ9ULI0 1458 aa33.07■■■□□ 2.88
FAM43A-201ENST00000329759 APLP2Q06481 763 aa33.06■■■□□ 2.88
FAM43A-201ENST00000329759 CLSPNQ9HAW4 1339 aa32.95■■■□□ 2.86
FAM43A-201ENST00000329759 TOP2BQ02880 1626 aa32.86■■■□□ 2.85
FAM43A-201ENST00000329759 DHX57Q6P158 1386 aaKnown RBP32.85■■■□□ 2.85
FAM43A-201ENST00000329759 ERICH3Q5RHP9 1530 aa32.79■■■□□ 2.84
FAM43A-201ENST00000329759 BIVM-ERCC5R4GMW8 1640 aa32.76■■■□□ 2.84
FAM43A-201ENST00000329759 RANGAP1P46060 587 aaPredicted RBP32.75■■■□□ 2.83
FAM43A-201ENST00000329759 ARAP1Q96P48 1450 aa32.74■■■□□ 2.83
FAM43A-201ENST00000329759 PRXQ9BXM0 1461 aa32.69■■■□□ 2.82
FAM43A-201ENST00000329759 RRBP1Q9P2E9 1410 aaKnown RBP32.62■■■□□ 2.81
FAM43A-201ENST00000329759 SUPT16HQ9Y5B9 1047 aaKnown RBP32.58■■■□□ 2.81
FAM43A-201ENST00000329759 CUX2O14529 1486 aa32.58■■■□□ 2.81
FAM43A-201ENST00000329759 KANK4Q5T7N3 995 aaPredicted RBP32.56■■■□□ 2.8
FAM43A-201ENST00000329759 CCNB3Q8WWL7 1395 aa32.41■■■□□ 2.78
FAM43A-201ENST00000329759 NCAPD3P42695 1498 aa32.4■■■□□ 2.78
FAM43A-201ENST00000329759 CUX1P39880 1505 aa32.37■■■□□ 2.77
FAM43A-201ENST00000329759 HMGXB3Q12766 1538 aa32.36■■■□□ 2.77
FAM43A-201ENST00000329759 KIF27Q86VH2 1401 aa32.35■■■□□ 2.77
FAM43A-201ENST00000329759 ARHGAP35Q9NRY4 1499 aa32.33■■■□□ 2.77
FAM43A-201ENST00000329759 MAPKBP1O60336 1514 aa32.25■■■□□ 2.75
FAM43A-201ENST00000329759 TSHZ2Q9NRE2 1034 aa32.23■■■□□ 2.75
FAM43A-201ENST00000329759 RAB3GAP2Q9H2M9 1393 aa32.2■■■□□ 2.75
FAM43A-201ENST00000329759 TIAM1Q13009 1591 aa32.15■■■□□ 2.74
FAM43A-201ENST00000329759 MAP3K1Q13233 1512 aa32.14■■■□□ 2.74
FAM43A-201ENST00000329759 ITGAEP38570 1179 aa32.14■■■□□ 2.74
FAM43A-201ENST00000329759 CFTRP13569 1480 aa32.12■■■□□ 2.73
FAM43A-201ENST00000329759 KCNH8Q96L42 1107 aa32.09■■■□□ 2.73
FAM43A-201ENST00000329759 BCL11AQ9H165 835 aa32.08■■■□□ 2.73
FAM43A-201ENST00000329759 ANP32EQ9BTT0 268 aa32.05■■■□□ 2.72
FAM43A-201ENST00000329759 SETD5Q9C0A6 1442 aa32.05■■■□□ 2.72
FAM43A-201ENST00000329759 WDR97A6NE52 1622 aa32.01■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms