RNA–Protein interactions for RNA: ENST00000312521.8

NR1D2-201, Transcript of nuclear receptor subfamily 1 group D member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NR1D2, Length 5,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1D2-201ENST00000312521 DCAF8L2P0C7V8 631 aa32.74■■■□□ 2.83
NR1D2-201ENST00000312521 SUPT5HO00267 1087 aaKnown RBP31.08■■■□□ 2.57
NR1D2-201ENST00000312521 NISCHQ9Y2I1 1504 aa30.49■■■□□ 2.47
NR1D2-201ENST00000312521 SHROOM4Q9ULL8 1493 aa30.3■■■□□ 2.44
NR1D2-201ENST00000312521 EHMT2Q96KQ7 1210 aa30.11■■■□□ 2.41
NR1D2-201ENST00000312521 PELP1Q8IZL8 1130 aaKnown RBP30.01■■■□□ 2.4
NR1D2-201ENST00000312521 APLP2Q06481 763 aa29.85■■■□□ 2.37
NR1D2-201ENST00000312521 FAM9AQ8IZU1 332 aaPredicted RBP29.39■■■□□ 2.3
NR1D2-201ENST00000312521 TTBK1Q5TCY1 1321 aaPredicted RBP29.13■■■□□ 2.25
NR1D2-201ENST00000312521 PCGF6Q9BYE7 350 aa29.09■■■□□ 2.25
NR1D2-201ENST00000312521 CENPBP07199 599 aaPredicted RBP28.84■■■□□ 2.21
NR1D2-201ENST00000312521 RANGAP1P46060 587 aaPredicted RBP28.83■■■□□ 2.21
NR1D2-201ENST00000312521 ZEB1P37275 1124 aaPredicted RBP28.82■■■□□ 2.2
NR1D2-201ENST00000312521 TRIM41Q8WV44 630 aa28.81■■■□□ 2.2
NR1D2-201ENST00000312521 CCER1Q8TC90 406 aaPredicted RBP28.73■■■□□ 2.19
NR1D2-201ENST00000312521 ERICH6Q7L0X2 663 aa28.69■■■□□ 2.18
NR1D2-201ENST00000312521 ATP1B4Q9UN42 357 aaPredicted RBP28.68■■■□□ 2.18
NR1D2-201ENST00000312521 UBTFP17480 764 aaKnown RBP28.56■■■□□ 2.16
NR1D2-201ENST00000312521 NEFLP07196 543 aa28.31■■■□□ 2.12
NR1D2-201ENST00000312521 YTHDC1Q96MU7 727 aaKnown RBP28.08■■■□□ 2.09
NR1D2-201ENST00000312521 PPARGC1BQ86YN6 1023 aaKnown RBP27.93■■■□□ 2.06
NR1D2-201ENST00000312521 TRIM26Q12899 539 aaPredicted RBP27.85■■■□□ 2.05
NR1D2-201ENST00000312521 MYT1Q01538 1121 aa27.75■■■□□ 2.03
NR1D2-201ENST00000312521 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.67■■■□□ 2.02
NR1D2-201ENST00000312521 HNRNPUL2Q1KMD3 747 aaKnown RBP27.67■■■□□ 2.02
NR1D2-201ENST00000312521 ITGAEP38570 1179 aa27.67■■■□□ 2.02
NR1D2-201ENST00000312521 MYT1LQ9UL68 1186 aa27.66■■■□□ 2.02
NR1D2-201ENST00000312521 POLR3GLQ9BT43 218 aa27.58■■■□□ 2.01
NR1D2-201ENST00000312521 DAXXQ9UER7 740 aaPredicted RBP27.54■■■□□ 2
NR1D2-201ENST00000312521 HRCP23327 699 aa27.53■■■□□ 2
NR1D2-201ENST00000312521 LOC105371045A0A1W2PR82 267 aa27.4■■□□□ 1.98
NR1D2-201ENST00000312521 CHIC1Q5VXU3 224 aa27.35■■□□□ 1.97
NR1D2-201ENST00000312521 CNGB1Q14028 1251 aaPredicted RBP27.25■■□□□ 1.95
NR1D2-201ENST00000312521 SLC4A1APQ9BWU0 796 aaKnown RBP27.09■■□□□ 1.93
NR1D2-201ENST00000312521 DIEXFQ68CQ4 756 aaKnown RBP26.95■■□□□ 1.9
NR1D2-201ENST00000312521 FAM50AQ14320 339 aaKnown RBP26.94■■□□□ 1.9
NR1D2-201ENST00000312521 CLSPNQ9HAW4 1339 aa26.94■■□□□ 1.9
NR1D2-201ENST00000312521 TRIM52Q96A61 297 aa26.86■■□□□ 1.89
NR1D2-201ENST00000312521 ZNF316A6NFI3 1004 aaPredicted RBP26.85■■□□□ 1.89
NR1D2-201ENST00000312521 RTL5Q5HYW3 569 aaPredicted RBP26.85■■□□□ 1.89
NR1D2-201ENST00000312521 NEUROD1Q13562 356 aa26.71■■□□□ 1.87
NR1D2-201ENST00000312521 PABPN1Q86U42 306 aaKnown RBP eCLIP26.63■■□□□ 1.85
NR1D2-201ENST00000312521 ANP32CO43423 234 aa26.57■■□□□ 1.84
NR1D2-201ENST00000312521 ZNF326Q5BKZ1 582 aaKnown RBP26.55■■□□□ 1.84
NR1D2-201ENST00000312521 ZBTB47Q9UFB7 747 aaPredicted RBP26.47■■□□□ 1.83
NR1D2-201ENST00000312521 ABCC9O60706 1549 aa26.45■■□□□ 1.83
NR1D2-201ENST00000312521 BCANQ96GW7 911 aa26.44■■□□□ 1.82
NR1D2-201ENST00000312521 FBLN2P98095 1184 aa26.41■■□□□ 1.82
NR1D2-201ENST00000312521 CDK11AQ9UQ88 783 aaPredicted RBP26.38■■□□□ 1.81
NR1D2-201ENST00000312521 GTF3C3Q9Y5Q9 886 aa26.35■■□□□ 1.81
NR1D2-201ENST00000312521 CANXP27824 592 aaKnown RBP26.26■■□□□ 1.79
NR1D2-201ENST00000312521 NEFMP07197 916 aa26.25■■□□□ 1.79
NR1D2-201ENST00000312521 CSRNP3Q8WYN3 585 aa26.18■■□□□ 1.78
NR1D2-201ENST00000312521 SLC24A1O60721 1099 aa26.18■■□□□ 1.78
NR1D2-201ENST00000312521 P3H3Q8IVL6 736 aa26.17■■□□□ 1.78
NR1D2-201ENST00000312521 ARID3CA6NKF2 412 aa26.1■■□□□ 1.77
NR1D2-201ENST00000312521 BCL11AQ9H165 835 aa26.08■■□□□ 1.77
NR1D2-201ENST00000312521 ZNF777Q9ULD5 760 aaPredicted RBP26.05■■□□□ 1.76
NR1D2-201ENST00000312521 ANP32AP39687 249 aaKnown RBP25.97■■□□□ 1.75
NR1D2-201ENST00000312521 ACIN1Q9UKV3 1341 aaKnown RBP25.94■■□□□ 1.74
NR1D2-201ENST00000312521 ESF1Q9H501 851 aaKnown RBP25.85■■□□□ 1.73
NR1D2-201ENST00000312521 TONSLQ96HA7 1378 aa25.83■■□□□ 1.73
NR1D2-201ENST00000312521 NPM2Q86SE8 214 aaKnown RBP25.78■■□□□ 1.72
NR1D2-201ENST00000312521 CHGAP10645 457 aaKnown RBP25.76■■□□□ 1.71
NR1D2-201ENST00000312521 STAG3Q9UJ98 1225 aa25.73■■□□□ 1.71
NR1D2-201ENST00000312521 FKBP8Q14318 412 aa25.69■■□□□ 1.7
NR1D2-201ENST00000312521 HNRNPUQ00839 825 aaKnown RBP eCLIP25.69■■□□□ 1.7
NR1D2-201ENST00000312521 HSP90AA1P07900 732 aaKnown RBP25.65■■□□□ 1.7
NR1D2-201ENST00000312521 NPM1P06748 294 aaKnown RBP eCLIP25.65■■□□□ 1.7
NR1D2-201ENST00000312521 UPF2Q9HAU5 1272 aaKnown RBP25.65■■□□□ 1.7
NR1D2-201ENST00000312521 ANP32BQ92688 251 aaKnown RBP25.64■■□□□ 1.7
NR1D2-201ENST00000312521 DDX10Q13206 875 aaKnown RBP25.64■■□□□ 1.69
NR1D2-201ENST00000312521 FAM9BQ8IZU0 186 aa25.63■■□□□ 1.69
NR1D2-201ENST00000312521 TMC1Q8TDI8 760 aa25.54■■□□□ 1.68
NR1D2-201ENST00000312521 CHIC2Q9UKJ5 165 aa25.52■■□□□ 1.68
NR1D2-201ENST00000312521 SALL2Q9Y467 1007 aaPredicted RBP25.51■■□□□ 1.68
NR1D2-201ENST00000312521 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.5■■□□□ 1.67
NR1D2-201ENST00000312521 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.49■■□□□ 1.67
NR1D2-201ENST00000312521 SCRIBQ14160 1630 aa25.48■■□□□ 1.67
NR1D2-201ENST00000312521 TSPY4P0CV99 314 aa25.48■■□□□ 1.67
NR1D2-201ENST00000312521 TSPY10P0CW01 314 aa25.48■■□□□ 1.67
NR1D2-201ENST00000312521 CCDC136Q96JN2 1154 aa25.45■■□□□ 1.67
NR1D2-201ENST00000312521 PLPPR3Q6T4P5 718 aa25.43■■□□□ 1.66
NR1D2-201ENST00000312521 WDR43Q15061 677 aaKnown RBP eCLIP25.43■■□□□ 1.66
NR1D2-201ENST00000312521 DCAF1Q9Y4B6 1507 aa25.4■■□□□ 1.66
NR1D2-201ENST00000312521 MRS2Q9HD23 443 aa25.39■■□□□ 1.65
NR1D2-201ENST00000312521 KDM2AQ9Y2K7 1162 aa25.36■■□□□ 1.65
NR1D2-201ENST00000312521 MTUS2Q5JR59 1369 aa25.35■■□□□ 1.65
NR1D2-201ENST00000312521 EIF5BO60841 1220 aaKnown RBP25.34■■□□□ 1.65
NR1D2-201ENST00000312521 CHMP7Q8WUX9 453 aaPredicted RBP25.23■■□□□ 1.63
NR1D2-201ENST00000312521 EIF4G2P78344 907 aaKnown RBP eCLIP25.22■■□□□ 1.63
NR1D2-201ENST00000312521 MYH16Q9H6N6 1097 aa25.19■■□□□ 1.62
NR1D2-201ENST00000312521 CLIP1P30622 1438 aa25.16■■□□□ 1.62
NR1D2-201ENST00000312521 NBR1Q14596 966 aa25.13■■□□□ 1.61
NR1D2-201ENST00000312521 ZCCHC6Q5VYS8 1495 aaKnown RBP25.13■■□□□ 1.61
NR1D2-201ENST00000312521 MIER1Q8N108 512 aa25.12■■□□□ 1.61
NR1D2-201ENST00000312521 HIRIP3Q9BW71 556 aaPredicted RBP25.11■■□□□ 1.61
NR1D2-201ENST00000312521 RRP7BPQ9NSQ0 103 aa25.11■■□□□ 1.61
NR1D2-201ENST00000312521 SCAF1Q9H7N4 1312 aaKnown RBP25.09■■□□□ 1.61
NR1D2-201ENST00000312521 IRX6P78412 446 aaPredicted RBP25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms