RNA–Protein interactions for RNA: ENST00000602540.5

PHLDA1-202, Transcript of pleckstrin homology like domain family A member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHLDA1, Length 5,741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHLDA1-202ENST00000602540 DCAF8L2P0C7V8 631 aa32.12■■■□□ 2.73
PHLDA1-202ENST00000602540 SUPT5HO00267 1087 aaKnown RBP30.46■■■□□ 2.47
PHLDA1-202ENST00000602540 PELP1Q8IZL8 1130 aaKnown RBP29.8■■■□□ 2.36
PHLDA1-202ENST00000602540 NISCHQ9Y2I1 1504 aa29.75■■■□□ 2.35
PHLDA1-202ENST00000602540 SHROOM4Q9ULL8 1493 aa29.73■■■□□ 2.35
PHLDA1-202ENST00000602540 EHMT2Q96KQ7 1210 aa29.64■■■□□ 2.34
PHLDA1-202ENST00000602540 APLP2Q06481 763 aa29.42■■■□□ 2.3
PHLDA1-202ENST00000602540 FAM9AQ8IZU1 332 aaPredicted RBP29.04■■■□□ 2.24
PHLDA1-202ENST00000602540 TTBK1Q5TCY1 1321 aaPredicted RBP28.69■■■□□ 2.18
PHLDA1-202ENST00000602540 PCGF6Q9BYE7 350 aa28.56■■■□□ 2.16
PHLDA1-202ENST00000602540 ERICH6Q7L0X2 663 aa28.53■■■□□ 2.16
PHLDA1-202ENST00000602540 CENPBP07199 599 aaPredicted RBP28.48■■■□□ 2.15
PHLDA1-202ENST00000602540 CCER1Q8TC90 406 aaPredicted RBP28.47■■■□□ 2.15
PHLDA1-202ENST00000602540 ZEB1P37275 1124 aaPredicted RBP28.4■■■□□ 2.14
PHLDA1-202ENST00000602540 RANGAP1P46060 587 aaPredicted RBP28.38■■■□□ 2.13
PHLDA1-202ENST00000602540 ATP1B4Q9UN42 357 aaPredicted RBP28.26■■■□□ 2.11
PHLDA1-202ENST00000602540 TRIM41Q8WV44 630 aa28.25■■■□□ 2.11
PHLDA1-202ENST00000602540 UBTFP17480 764 aaKnown RBP28.04■■■□□ 2.08
PHLDA1-202ENST00000602540 NEFLP07196 543 aa28■■■□□ 2.07
PHLDA1-202ENST00000602540 YTHDC1Q96MU7 727 aaKnown RBP27.74■■■□□ 2.03
PHLDA1-202ENST00000602540 MYT1Q01538 1121 aa27.56■■■□□ 2
PHLDA1-202ENST00000602540 PPARGC1BQ86YN6 1023 aaKnown RBP27.42■■□□□ 1.98
PHLDA1-202ENST00000602540 TRIM26Q12899 539 aaPredicted RBP27.35■■□□□ 1.97
PHLDA1-202ENST00000602540 DAXXQ9UER7 740 aaPredicted RBP27.33■■□□□ 1.97
PHLDA1-202ENST00000602540 MYT1LQ9UL68 1186 aa27.31■■□□□ 1.96
PHLDA1-202ENST00000602540 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.24■■□□□ 1.95
PHLDA1-202ENST00000602540 HNRNPUL2Q1KMD3 747 aaKnown RBP27.24■■□□□ 1.95
PHLDA1-202ENST00000602540 POLR3GLQ9BT43 218 aa27.22■■□□□ 1.95
PHLDA1-202ENST00000602540 ITGAEP38570 1179 aa27.2■■□□□ 1.95
PHLDA1-202ENST00000602540 HRCP23327 699 aa27.03■■□□□ 1.92
PHLDA1-202ENST00000602540 CNGB1Q14028 1251 aaPredicted RBP26.86■■□□□ 1.89
PHLDA1-202ENST00000602540 SLC4A1APQ9BWU0 796 aaKnown RBP26.79■■□□□ 1.88
PHLDA1-202ENST00000602540 LOC105371045A0A1W2PR82 267 aa26.77■■□□□ 1.88
PHLDA1-202ENST00000602540 CHIC1Q5VXU3 224 aa26.73■■□□□ 1.87
PHLDA1-202ENST00000602540 ZNF316A6NFI3 1004 aaPredicted RBP26.66■■□□□ 1.86
PHLDA1-202ENST00000602540 CLSPNQ9HAW4 1339 aa26.65■■□□□ 1.86
PHLDA1-202ENST00000602540 RTL5Q5HYW3 569 aaPredicted RBP26.61■■□□□ 1.85
PHLDA1-202ENST00000602540 FAM50AQ14320 339 aaKnown RBP26.51■■□□□ 1.83
PHLDA1-202ENST00000602540 DIEXFQ68CQ4 756 aaKnown RBP26.5■■□□□ 1.83
PHLDA1-202ENST00000602540 TRIM52Q96A61 297 aa26.45■■□□□ 1.82
PHLDA1-202ENST00000602540 NEUROD1Q13562 356 aa26.29■■□□□ 1.8
PHLDA1-202ENST00000602540 ZBTB47Q9UFB7 747 aaPredicted RBP26.21■■□□□ 1.79
PHLDA1-202ENST00000602540 ANP32CO43423 234 aa26.18■■□□□ 1.78
PHLDA1-202ENST00000602540 ZNF326Q5BKZ1 582 aaKnown RBP26.14■■□□□ 1.78
PHLDA1-202ENST00000602540 BCANQ96GW7 911 aa26.08■■□□□ 1.77
PHLDA1-202ENST00000602540 CDK11AQ9UQ88 783 aaPredicted RBP26.07■■□□□ 1.76
PHLDA1-202ENST00000602540 PABPN1Q86U42 306 aaKnown RBP eCLIP26.01■■□□□ 1.76
PHLDA1-202ENST00000602540 CANXP27824 592 aaKnown RBP25.98■■□□□ 1.75
PHLDA1-202ENST00000602540 NEFMP07197 916 aa25.93■■□□□ 1.74
PHLDA1-202ENST00000602540 GTF3C3Q9Y5Q9 886 aa25.93■■□□□ 1.74
PHLDA1-202ENST00000602540 FBLN2P98095 1184 aa25.92■■□□□ 1.74
PHLDA1-202ENST00000602540 SLC24A1O60721 1099 aa25.91■■□□□ 1.74
PHLDA1-202ENST00000602540 ABCC9O60706 1549 aa25.86■■□□□ 1.73
PHLDA1-202ENST00000602540 BCL11AQ9H165 835 aa25.79■■□□□ 1.72
PHLDA1-202ENST00000602540 ANP32AP39687 249 aaKnown RBP25.68■■□□□ 1.7
PHLDA1-202ENST00000602540 P3H3Q8IVL6 736 aa25.66■■□□□ 1.7
PHLDA1-202ENST00000602540 ARID3CA6NKF2 412 aa25.63■■□□□ 1.69
PHLDA1-202ENST00000602540 ZNF777Q9ULD5 760 aaPredicted RBP25.61■■□□□ 1.69
PHLDA1-202ENST00000602540 CSRNP3Q8WYN3 585 aa25.56■■□□□ 1.68
PHLDA1-202ENST00000602540 ACIN1Q9UKV3 1341 aaKnown RBP25.5■■□□□ 1.67
PHLDA1-202ENST00000602540 NPM2Q86SE8 214 aaKnown RBP25.49■■□□□ 1.67
PHLDA1-202ENST00000602540 ESF1Q9H501 851 aaKnown RBP25.48■■□□□ 1.67
PHLDA1-202ENST00000602540 ANP32BQ92688 251 aaKnown RBP25.43■■□□□ 1.66
PHLDA1-202ENST00000602540 TONSLQ96HA7 1378 aa25.4■■□□□ 1.66
PHLDA1-202ENST00000602540 HSP90AA1P07900 732 aaKnown RBP25.38■■□□□ 1.65
PHLDA1-202ENST00000602540 STAG3Q9UJ98 1225 aa25.37■■□□□ 1.65
PHLDA1-202ENST00000602540 UPF2Q9HAU5 1272 aaKnown RBP25.36■■□□□ 1.65
PHLDA1-202ENST00000602540 CHGAP10645 457 aaKnown RBP25.35■■□□□ 1.65
PHLDA1-202ENST00000602540 FKBP8Q14318 412 aa25.31■■□□□ 1.64
PHLDA1-202ENST00000602540 HNRNPUQ00839 825 aaKnown RBP eCLIP25.26■■□□□ 1.63
PHLDA1-202ENST00000602540 FAM9BQ8IZU0 186 aa25.22■■□□□ 1.63
PHLDA1-202ENST00000602540 NPM1P06748 294 aaKnown RBP eCLIP25.19■■□□□ 1.62
PHLDA1-202ENST00000602540 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.16■■□□□ 1.62
PHLDA1-202ENST00000602540 DDX10Q13206 875 aaKnown RBP25.15■■□□□ 1.62
PHLDA1-202ENST00000602540 TMC1Q8TDI8 760 aa25.11■■□□□ 1.61
PHLDA1-202ENST00000602540 EIF5BO60841 1220 aaKnown RBP25.1■■□□□ 1.61
PHLDA1-202ENST00000602540 SALL2Q9Y467 1007 aaPredicted RBP25.1■■□□□ 1.61
PHLDA1-202ENST00000602540 PLPPR3Q6T4P5 718 aa25.09■■□□□ 1.61
PHLDA1-202ENST00000602540 WDR43Q15061 677 aaKnown RBP eCLIP25.08■■□□□ 1.61
PHLDA1-202ENST00000602540 CCDC136Q96JN2 1154 aa25.07■■□□□ 1.6
PHLDA1-202ENST00000602540 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.06■■□□□ 1.61e-6■□□□□ 8.9
PHLDA1-202ENST00000602540 CHIC2Q9UKJ5 165 aa25.03■■□□□ 1.6
PHLDA1-202ENST00000602540 TSPY4P0CV99 314 aa24.97■■□□□ 1.59
PHLDA1-202ENST00000602540 TSPY10P0CW01 314 aa24.97■■□□□ 1.59
PHLDA1-202ENST00000602540 SCRIBQ14160 1630 aa24.96■■□□□ 1.59
PHLDA1-202ENST00000602540 MRS2Q9HD23 443 aa24.95■■□□□ 1.58
PHLDA1-202ENST00000602540 DCAF1Q9Y4B6 1507 aa24.92■■□□□ 1.58
PHLDA1-202ENST00000602540 KDM2AQ9Y2K7 1162 aa24.91■■□□□ 1.58
PHLDA1-202ENST00000602540 MYH16Q9H6N6 1097 aa24.91■■□□□ 1.58
PHLDA1-202ENST00000602540 GLIPR1L2Q4G1C9 344 aa24.9■■□□□ 1.58
PHLDA1-202ENST00000602540 MTUS2Q5JR59 1369 aa24.86■■□□□ 1.57
PHLDA1-202ENST00000602540 NBR1Q14596 966 aa24.85■■□□□ 1.57
PHLDA1-202ENST00000602540 SCAF1Q9H7N4 1312 aaKnown RBP24.81■■□□□ 1.56
PHLDA1-202ENST00000602540 ARXQ96QS3 562 aa24.79■■□□□ 1.56
PHLDA1-202ENST00000602540 EIF4G2P78344 907 aaKnown RBP eCLIP24.75■■□□□ 1.55
PHLDA1-202ENST00000602540 CDK11BP21127 795 aaKnown RBP24.74■■□□□ 1.55
PHLDA1-202ENST00000602540 CHMP7Q8WUX9 453 aaPredicted RBP24.73■■□□□ 1.55
PHLDA1-202ENST00000602540 A0A0G2JS52 829 aa24.68■■□□□ 1.54
PHLDA1-202ENST00000602540 BECN1Q14457 450 aa24.68■■□□□ 1.54
PHLDA1-202ENST00000602540 IRX6P78412 446 aaPredicted RBP24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms