RNA–Protein interactions for RNA: ENST00000393784.7

ERGIC1-202, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERGIC1, Length 2,881 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-202ENST00000393784 NISCHQ9Y2I1 1504 aa46.2■■■■■ 4.99
ERGIC1-202ENST00000393784 SHROOM4Q9ULL8 1493 aa40.3■■■■■ 4.04
ERGIC1-202ENST00000393784 SUPT5HO00267 1087 aaKnown RBP39.7■■■■□ 3.95
ERGIC1-202ENST00000393784 ZCCHC6Q5VYS8 1495 aaKnown RBP39.12■■■■□ 3.85
ERGIC1-202ENST00000393784 DCAF8L2P0C7V8 631 aa38.86■■■■□ 3.81
ERGIC1-202ENST00000393784 CCDC180Q9P1Z9 1646 aa38.74■■■■□ 3.79
ERGIC1-202ENST00000393784 CHIC1Q5VXU3 224 aa38.59■■■■□ 3.77
ERGIC1-202ENST00000393784 MYO15BQ96JP2 1530 aa38.57■■■■□ 3.77
ERGIC1-202ENST00000393784 HRCP23327 699 aa38.08■■■■□ 3.69
ERGIC1-202ENST00000393784 PCGF6Q9BYE7 350 aa38.01■■■■□ 3.67
ERGIC1-202ENST00000393784 LOC105371045A0A1W2PR82 267 aa37.7■■■■□ 3.63
ERGIC1-202ENST00000393784 DCAF1Q9Y4B6 1507 aa37.62■■■■□ 3.61
ERGIC1-202ENST00000393784 PPARGC1BQ86YN6 1023 aaKnown RBP37.56■■■■□ 3.6
ERGIC1-202ENST00000393784 ABCC9O60706 1549 aa36.96■■■■□ 3.51
ERGIC1-202ENST00000393784 TRIM26Q12899 539 aaPredicted RBP36.92■■■■□ 3.5
ERGIC1-202ENST00000393784 RSF1Q96T23 1441 aaPredicted RBP36.87■■■■□ 3.49
ERGIC1-202ENST00000393784 SCRIBQ14160 1630 aa36.87■■■■□ 3.49
ERGIC1-202ENST00000393784 FAM9AQ8IZU1 332 aaPredicted RBP36.77■■■■□ 3.48
ERGIC1-202ENST00000393784 TRIM41Q8WV44 630 aa36.76■■■■□ 3.48
ERGIC1-202ENST00000393784 EHMT2Q96KQ7 1210 aa36.67■■■■□ 3.46
ERGIC1-202ENST00000393784 RB1CC1Q8TDY2 1594 aa36.55■■■■□ 3.44
ERGIC1-202ENST00000393784 CECR2Q9BXF3 1484 aa36.27■■■■□ 3.4
ERGIC1-202ENST00000393784 ZEB1P37275 1124 aaPredicted RBP36.13■■■■□ 3.37
ERGIC1-202ENST00000393784 MROH2BQ7Z745 1585 aa36.09■■■■□ 3.37
ERGIC1-202ENST00000393784 WIZO95785 1651 aa35.88■■■■□ 3.33
ERGIC1-202ENST00000393784 NACADO15069 1562 aa35.87■■■■□ 3.33
ERGIC1-202ENST00000393784 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.64■■■■□ 3.3
ERGIC1-202ENST00000393784 TTBK1Q5TCY1 1321 aaPredicted RBP35.55■■■■□ 3.28
ERGIC1-202ENST00000393784 BAZ1AQ9NRL2 1556 aaPredicted RBP35.49■■■■□ 3.27
ERGIC1-202ENST00000393784 SCAF1Q9H7N4 1312 aaKnown RBP35.48■■■■□ 3.27
ERGIC1-202ENST00000393784 CCER1Q8TC90 406 aaPredicted RBP35.46■■■■□ 3.27
ERGIC1-202ENST00000393784 EIF4G1Q04637 1599 aaKnown RBP35.38■■■■□ 3.25
ERGIC1-202ENST00000393784 ABCC8Q09428 1581 aa35.37■■■■□ 3.25
ERGIC1-202ENST00000393784 CCDC88BA6NC98 1476 aa35.33■■■■□ 3.25
ERGIC1-202ENST00000393784 SOGA1O94964 1423 aa35.18■■■■□ 3.22
ERGIC1-202ENST00000393784 TOP2AP11388 1531 aaKnown RBP35.16■■■■□ 3.22
ERGIC1-202ENST00000393784 CEP162Q5TB80 1403 aa35.11■■■■□ 3.21
ERGIC1-202ENST00000393784 SMARCA4P51532 1647 aa35.06■■■■□ 3.2
ERGIC1-202ENST00000393784 SMARCA2P51531 1590 aa35.05■■■■□ 3.2
ERGIC1-202ENST00000393784 UBTFP17480 764 aaKnown RBP35.03■■■■□ 3.2
ERGIC1-202ENST00000393784 RUSC2Q8N2Y8 1516 aa35.01■■■■□ 3.19
ERGIC1-202ENST00000393784 WRNQ14191 1432 aaPredicted RBP eCLIP34.98■■■■□ 3.19
ERGIC1-202ENST00000393784 CSRNP3Q8WYN3 585 aa34.96■■■■□ 3.19
ERGIC1-202ENST00000393784 NEUROD1Q13562 356 aa34.95■■■■□ 3.18
ERGIC1-202ENST00000393784 DIEXFQ68CQ4 756 aaKnown RBP34.95■■■■□ 3.18
ERGIC1-202ENST00000393784 TNIKQ9UKE5 1360 aa34.91■■■■□ 3.18
ERGIC1-202ENST00000393784 PABPN1Q86U42 306 aaKnown RBP eCLIP34.9■■■■□ 3.18
ERGIC1-202ENST00000393784 ACIN1Q9UKV3 1341 aaKnown RBP34.89■■■■□ 3.18
ERGIC1-202ENST00000393784 PELP1Q8IZL8 1130 aaKnown RBP34.81■■■■□ 3.16
ERGIC1-202ENST00000393784 UNC13AQ9UPW8 1703 aa34.73■■■■□ 3.15
ERGIC1-202ENST00000393784 EEA1Q15075 1411 aa34.68■■■■□ 3.14
ERGIC1-202ENST00000393784 GOLGA3Q08378 1498 aa34.63■■■■□ 3.13
ERGIC1-202ENST00000393784 GTF3C3Q9Y5Q9 886 aa34.62■■■■□ 3.13
ERGIC1-202ENST00000393784 HNRNPUL2Q1KMD3 747 aaKnown RBP34.6■■■■□ 3.13
ERGIC1-202ENST00000393784 CENPBP07199 599 aaPredicted RBP34.55■■■■□ 3.12
ERGIC1-202ENST00000393784 RANGAP1P46060 587 aaPredicted RBP34.53■■■■□ 3.12
ERGIC1-202ENST00000393784 ZNF316A6NFI3 1004 aaPredicted RBP34.5■■■■□ 3.11
ERGIC1-202ENST00000393784 YTHDC1Q96MU7 727 aaKnown RBP34.4■■■■□ 3.1
ERGIC1-202ENST00000393784 SYNJ1O43426 1573 aa34.4■■■■□ 3.1
ERGIC1-202ENST00000393784 BICRAQ9NZM4 1560 aa34.4■■■■□ 3.1
ERGIC1-202ENST00000393784 CLIP1P30622 1438 aa34.37■■■■□ 3.09
ERGIC1-202ENST00000393784 CEP164Q9UPV0 1460 aa34.36■■■■□ 3.09
ERGIC1-202ENST00000393784 RAPGEF2Q9Y4G8 1499 aa34.23■■■■□ 3.07
ERGIC1-202ENST00000393784 APLP2Q06481 763 aa34.23■■■■□ 3.07
ERGIC1-202ENST00000393784 MIER1Q8N108 512 aa34.21■■■■□ 3.07
ERGIC1-202ENST00000393784 PEG3Q9GZU2 1588 aa34.19■■■■□ 3.06
ERGIC1-202ENST00000393784 VPS8Q8N3P4 1428 aa34.19■■■■□ 3.06
ERGIC1-202ENST00000393784 KIF21BO75037 1637 aa34.18■■■■□ 3.06
ERGIC1-202ENST00000393784 ATAD2BQ9ULI0 1458 aa34.17■■■■□ 3.06
ERGIC1-202ENST00000393784 BAZ1BQ9UIG0 1483 aaKnown RBP34.11■■■■□ 3.05
ERGIC1-202ENST00000393784 KANK4Q5T7N3 995 aaPredicted RBP33.85■■■■□ 3.01
ERGIC1-202ENST00000393784 TOP2BQ02880 1626 aa33.79■■■■□ 3
ERGIC1-202ENST00000393784 DHX57Q6P158 1386 aaKnown RBP33.72■■■□□ 2.99
ERGIC1-202ENST00000393784 ARAP1Q96P48 1450 aa33.71■■■□□ 2.99
ERGIC1-202ENST00000393784 PRXQ9BXM0 1461 aa33.68■■■□□ 2.98
ERGIC1-202ENST00000393784 ITGAEP38570 1179 aa33.61■■■□□ 2.97
ERGIC1-202ENST00000393784 BIVM-ERCC5R4GMW8 1640 aa33.56■■■□□ 2.96
ERGIC1-202ENST00000393784 ERICH3Q5RHP9 1530 aa33.55■■■□□ 2.96
ERGIC1-202ENST00000393784 CUX1P39880 1505 aa33.52■■■□□ 2.96
ERGIC1-202ENST00000393784 CLSPNQ9HAW4 1339 aa33.51■■■□□ 2.96
ERGIC1-202ENST00000393784 KIF27Q86VH2 1401 aa33.47■■■□□ 2.95
ERGIC1-202ENST00000393784 RRBP1Q9P2E9 1410 aaKnown RBP33.4■■■□□ 2.94
ERGIC1-202ENST00000393784 CCNB3Q8WWL7 1395 aa33.37■■■□□ 2.93
ERGIC1-202ENST00000393784 ARHGAP35Q9NRY4 1499 aa33.37■■■□□ 2.93
ERGIC1-202ENST00000393784 NCAPD3P42695 1498 aa33.32■■■□□ 2.93
ERGIC1-202ENST00000393784 HMGXB3Q12766 1538 aa33.23■■■□□ 2.91
ERGIC1-202ENST00000393784 CFTRP13569 1480 aa33.22■■■□□ 2.91
ERGIC1-202ENST00000393784 SUPT16HQ9Y5B9 1047 aaKnown RBP33.19■■■□□ 2.9
ERGIC1-202ENST00000393784 RAB3GAP2Q9H2M9 1393 aa33.19■■■□□ 2.9
ERGIC1-202ENST00000393784 KCNH8Q96L42 1107 aa33.18■■■□□ 2.9
ERGIC1-202ENST00000393784 CUX2O14529 1486 aa33.16■■■□□ 2.9
ERGIC1-202ENST00000393784 IGF1RP08069 1367 aa33.15■■■□□ 2.9
ERGIC1-202ENST00000393784 P3H3Q8IVL6 736 aa33.11■■■□□ 2.89
ERGIC1-202ENST00000393784 ATP1B4Q9UN42 357 aaPredicted RBP33.08■■■□□ 2.89
ERGIC1-202ENST00000393784 FAM50AQ14320 339 aaKnown RBP33.07■■■□□ 2.88
ERGIC1-202ENST00000393784 SIN3AQ96ST3 1273 aa33.05■■■□□ 2.88
ERGIC1-202ENST00000393784 CARMIL1Q5VZK9 1371 aa33.03■■■□□ 2.88
ERGIC1-202ENST00000393784 MAPKBP1O60336 1514 aa33.03■■■□□ 2.88
ERGIC1-202ENST00000393784 PHLDB1Q86UU1 1377 aa33.01■■■□□ 2.87
ERGIC1-202ENST00000393784 MYT1Q01538 1121 aa33■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms