Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RETP07949 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
RETP07949 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC24.18■■□□□ 1.46
RETP07949 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
RETP07949 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
RETP07949 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC24.18■■□□□ 1.46
RETP07949 TRIR-202ENST00000588213 841 ntTSL 3 BASIC24.18■■□□□ 1.46
RETP07949 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
RETP07949 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
RETP07949 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
RETP07949 KRT18P24-201ENST00000344739 1156 ntBASIC24.17■■□□□ 1.46
RETP07949 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
RETP07949 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC24.17■■□□□ 1.46
RETP07949 RPP21-222ENST00000433076 577 ntTSL 2 BASIC24.17■■□□□ 1.46
RETP07949 AC131281.2-201ENST00000520478 145 ntBASIC24.17■■□□□ 1.46
RETP07949 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC24.17■■□□□ 1.46
RETP07949 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
RETP07949 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
RETP07949 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RETP07949 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
RETP07949 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC24.16■■□□□ 1.46
RETP07949 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
RETP07949 AC137630.3-201ENST00000607245 391 ntBASIC24.16■■□□□ 1.46
RETP07949 SHF-208ENST00000560734 1731 ntTSL 3 BASIC24.15■■□□□ 1.46
RETP07949 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RETP07949 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RETP07949 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC24.15■■□□□ 1.46
RETP07949 SRR-208ENST00000576848 588 ntTSL 4 BASIC24.15■■□□□ 1.46
RETP07949 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
RETP07949 AL136116.3-201ENST00000402907 1138 ntBASIC24.14■■□□□ 1.45
RETP07949 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC24.14■■□□□ 1.45
RETP07949 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC24.14■■□□□ 1.45
RETP07949 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
RETP07949 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC24.14■■□□□ 1.45
RETP07949 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
RETP07949 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC24.13■■□□□ 1.45
RETP07949 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
RETP07949 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
RETP07949 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC24.13■■□□□ 1.45
RETP07949 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
RETP07949 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC24.13■■□□□ 1.45
RETP07949 AC005837.3-201ENST00000612163 286 ntBASIC24.13■■□□□ 1.45
RETP07949 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
RETP07949 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RETP07949 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
RETP07949 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
RETP07949 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RETP07949 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
RETP07949 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
RETP07949 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RETP07949 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RETP07949 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC24.12■■□□□ 1.45
RETP07949 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RETP07949 AC021242.3-201ENST00000607598 1377 ntBASIC24.12■■□□□ 1.45
RETP07949 AP002414.2-202ENST00000590929 1450 ntBASIC24.12■■□□□ 1.45
RETP07949 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RETP07949 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RETP07949 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC24.11■■□□□ 1.45
RETP07949 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RETP07949 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RETP07949 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC24.11■■□□□ 1.45
RETP07949 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC24.1■■□□□ 1.45
RETP07949 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
RETP07949 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
RETP07949 KRT18P10-201ENST00000388836 1287 ntBASIC24.1■■□□□ 1.45
RETP07949 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC24.1■■□□□ 1.45
RETP07949 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC24.1■■□□□ 1.45
RETP07949 AC110285.6-201ENST00000617652 491 ntBASIC24.1■■□□□ 1.45
RETP07949 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RETP07949 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC24.09■■□□□ 1.45
RETP07949 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC24.09■■□□□ 1.45
RETP07949 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
RETP07949 SHF-207ENST00000560540 2062 ntTSL 5 BASIC24.09■■□□□ 1.45
RETP07949 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC24.09■■□□□ 1.45
RETP07949 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RETP07949 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RETP07949 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC24.08■■□□□ 1.45
RETP07949 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC24.08■■□□□ 1.45
RETP07949 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC24.08■■□□□ 1.45
RETP07949 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC24.08■■□□□ 1.45
RETP07949 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
RETP07949 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
RETP07949 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC24.08■■□□□ 1.44
RETP07949 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
RETP07949 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
RETP07949 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC24.07■■□□□ 1.44
RETP07949 AC092028.1-203ENST00000608262 953 ntBASIC24.07■■□□□ 1.44
RETP07949 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC24.07■■□□□ 1.44
RETP07949 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
RETP07949 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
RETP07949 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
RETP07949 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
RETP07949 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC24.06■■□□□ 1.44
RETP07949 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
RETP07949 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC24.06■■□□□ 1.44
RETP07949 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
RETP07949 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
RETP07949 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
RETP07949 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
RETP07949 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms