Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC34.55■■■■□ 3.12
RETP07949 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC34.36■■■■□ 3.09
RETP07949 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC34.13■■■■□ 3.05
RETP07949 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC33.62■■■□□ 2.97
RETP07949 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
RETP07949 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC33.02■■■□□ 2.88
RETP07949 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC33.02■■■□□ 2.88
RETP07949 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC32.94■■■□□ 2.86
RETP07949 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
RETP07949 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC32.85■■■□□ 2.85
RETP07949 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
RETP07949 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC32.57■■■□□ 2.8
RETP07949 AL356512.1-201ENST00000607453 1739 ntBASIC32.52■■■□□ 2.8
RETP07949 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC32.51■■■□□ 2.79
RETP07949 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
RETP07949 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
RETP07949 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC32.05■■■□□ 2.72
RETP07949 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC32.03■■■□□ 2.72
RETP07949 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC32.03■■■□□ 2.72
RETP07949 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC32.02■■■□□ 2.72
RETP07949 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
RETP07949 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
RETP07949 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
RETP07949 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC31.95■■■□□ 2.71
RETP07949 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
RETP07949 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC31.75■■■□□ 2.67
RETP07949 INO80B-203ENST00000409917 796 ntTSL 2 BASIC31.67■■■□□ 2.66
RETP07949 ZNRF2P1-201ENST00000441407 443 ntBASIC31.65■■■□□ 2.66
RETP07949 AC006077.2-201ENST00000623591 457 ntBASIC31.62■■■□□ 2.65
RETP07949 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC31.46■■■□□ 2.63
RETP07949 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC31.43■■■□□ 2.62
RETP07949 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC31.35■■■□□ 2.61
RETP07949 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC31.3■■■□□ 2.6
RETP07949 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC31.28■■■□□ 2.6
RETP07949 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
RETP07949 AC015813.7-201ENST00000623294 581 ntBASIC31.15■■■□□ 2.58
RETP07949 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC31.12■■■□□ 2.57
RETP07949 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
RETP07949 HES6-203ENST00000409160 1600 ntTSL 2 BASIC30.99■■■□□ 2.55
RETP07949 AP002365.1-201ENST00000603448 772 ntBASIC30.83■■■□□ 2.53
RETP07949 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
RETP07949 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC30.73■■■□□ 2.51
RETP07949 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC30.73■■■□□ 2.51
RETP07949 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC30.69■■■□□ 2.5
RETP07949 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
RETP07949 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
RETP07949 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC30.61■■■□□ 2.49
RETP07949 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
RETP07949 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC30.55■■■□□ 2.48
RETP07949 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC30.53■■■□□ 2.48
RETP07949 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC30.51■■■□□ 2.48
RETP07949 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC30.4■■■□□ 2.46
RETP07949 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC30.39■■■□□ 2.46
RETP07949 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC30.39■■■□□ 2.46
RETP07949 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC30.38■■■□□ 2.45
RETP07949 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
RETP07949 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC30.35■■■□□ 2.45
RETP07949 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC30.34■■■□□ 2.45
RETP07949 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
RETP07949 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
RETP07949 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC30.27■■■□□ 2.44
RETP07949 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
RETP07949 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC30.26■■■□□ 2.43
RETP07949 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
RETP07949 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC30.22■■■□□ 2.43
RETP07949 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC30.19■■■□□ 2.42
RETP07949 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC30.08■■■□□ 2.41
RETP07949 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC30.07■■■□□ 2.4
RETP07949 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
RETP07949 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
RETP07949 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC30.03■■■□□ 2.4
RETP07949 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC30.02■■■□□ 2.4
RETP07949 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC30.01■■■□□ 2.39
RETP07949 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
RETP07949 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC29.97■■■□□ 2.39
RETP07949 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
RETP07949 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC29.96■■■□□ 2.39
RETP07949 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
RETP07949 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC29.93■■■□□ 2.38
RETP07949 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC29.9■■■□□ 2.38
RETP07949 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
RETP07949 DYNLL1-208ENST00000550178 581 ntBASIC29.87■■■□□ 2.37
RETP07949 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC29.83■■■□□ 2.37
RETP07949 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
RETP07949 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
RETP07949 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
RETP07949 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
RETP07949 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
RETP07949 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC29.73■■■□□ 2.35
RETP07949 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC29.73■■■□□ 2.35
RETP07949 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC29.73■■■□□ 2.35
RETP07949 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
RETP07949 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC29.7■■■□□ 2.35
RETP07949 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
RETP07949 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC29.66■■■□□ 2.34
RETP07949 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC29.66■■■□□ 2.34
RETP07949 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC29.65■■■□□ 2.34
RETP07949 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC29.64■■■□□ 2.34
RETP07949 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC29.64■■■□□ 2.34
RETP07949 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC29.63■■■□□ 2.33
Retrieved 100 of 98,524 protein–RNA pairs in 170.2 ms