RNA–Protein interactions for RNA: ENST00000403683.1

HIST2H3A-201, Transcript of histone cluster 2 H3 family member a, humanhuman

APPRIS P1 BASIC

Gene HIST2H3A, Length 1,656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3A-201ENST00000403683 NISCHQ9Y2I1 1504 aa57.97■■■■■ 6.87
HIST2H3A-201ENST00000403683 CCDC180Q9P1Z9 1646 aa50.74■■■■■ 5.71
HIST2H3A-201ENST00000403683 ABCC9O60706 1549 aa48.62■■■■■ 5.37
HIST2H3A-201ENST00000403683 ZCCHC6Q5VYS8 1495 aaKnown RBP48.55■■■■■ 5.36
HIST2H3A-201ENST00000403683 DCAF8L2P0C7V8 631 aa48.37■■■■■ 5.33
HIST2H3A-201ENST00000403683 DCAF1Q9Y4B6 1507 aa47.87■■■■■ 5.25
HIST2H3A-201ENST00000403683 MYO15BQ96JP2 1530 aa47.51■■■■■ 5.2
HIST2H3A-201ENST00000403683 NACADO15069 1562 aa47.45■■■■■ 5.19
HIST2H3A-201ENST00000403683 RB1CC1Q8TDY2 1594 aa47.21■■■■■ 5.15
HIST2H3A-201ENST00000403683 SHROOM4Q9ULL8 1493 aa47.08■■■■■ 5.13
HIST2H3A-201ENST00000403683 SCRIBQ14160 1630 aa46.68■■■■■ 5.06
HIST2H3A-201ENST00000403683 UNC13AQ9UPW8 1703 aa46.08■■■■■ 4.97
HIST2H3A-201ENST00000403683 PABPN1Q86U42 306 aaKnown RBP eCLIP45.82■■■■■ 4.92
HIST2H3A-201ENST00000403683 BICRAQ9NZM4 1560 aa45.67■■■■■ 4.9
HIST2H3A-201ENST00000403683 SUPT5HO00267 1087 aaKnown RBP45.1■■■■■ 4.81
HIST2H3A-201ENST00000403683 CECR2Q9BXF3 1484 aa45.1■■■■■ 4.81
HIST2H3A-201ENST00000403683 BAZ1AQ9NRL2 1556 aaPredicted RBP44.83■■■■■ 4.77
HIST2H3A-201ENST00000403683 RSF1Q96T23 1441 aaPredicted RBP44.78■■■■■ 4.76
HIST2H3A-201ENST00000403683 MROH2BQ7Z745 1585 aa44.77■■■■■ 4.76
HIST2H3A-201ENST00000403683 SMARCA4P51532 1647 aa44.66■■■■■ 4.74
HIST2H3A-201ENST00000403683 EIF4G1Q04637 1599 aaKnown RBP44.42■■■■■ 4.7
HIST2H3A-201ENST00000403683 WIZO95785 1651 aa44.37■■■■■ 4.69
HIST2H3A-201ENST00000403683 ATAD2BQ9ULI0 1458 aa44.1■■■■■ 4.65
HIST2H3A-201ENST00000403683 SMARCA2P51531 1590 aa44.08■■■■■ 4.65
HIST2H3A-201ENST00000403683 PEG3Q9GZU2 1588 aa44.08■■■■■ 4.65
HIST2H3A-201ENST00000403683 CC2D2AQ9P2K1 1620 aa43.91■■■■■ 4.62
HIST2H3A-201ENST00000403683 TOP2AP11388 1531 aaKnown RBP43.9■■■■■ 4.62
HIST2H3A-201ENST00000403683 BAZ1BQ9UIG0 1483 aaKnown RBP43.87■■■■■ 4.61
HIST2H3A-201ENST00000403683 NCAPD3P42695 1498 aa43.8■■■■■ 4.6
HIST2H3A-201ENST00000403683 HMGXB3Q12766 1538 aa43.66■■■■■ 4.58
HIST2H3A-201ENST00000403683 CCDC88BA6NC98 1476 aa43.48■■■■■ 4.55
HIST2H3A-201ENST00000403683 DNAJC5BQ9UF47 199 aa43.33■■■■■ 4.53
HIST2H3A-201ENST00000403683 CHIC1Q5VXU3 224 aa42.77■■■■■ 4.44
HIST2H3A-201ENST00000403683 CADPSQ9ULU8 1353 aa42.7■■■■■ 4.43
HIST2H3A-201ENST00000403683 CFTRP13569 1480 aa42.68■■■■■ 4.42
HIST2H3A-201ENST00000403683 NESP48681 1621 aa42.46■■■■■ 4.39
HIST2H3A-201ENST00000403683 TRIM41Q8WV44 630 aa42.44■■■■■ 4.39
HIST2H3A-201ENST00000403683 LAMC3Q9Y6N6 1575 aa42.41■■■■■ 4.38
HIST2H3A-201ENST00000403683 ABCC8Q09428 1581 aa42.38■■■■■ 4.38
HIST2H3A-201ENST00000403683 PRDM2Q13029 1718 aa42.33■■■■■ 4.37
HIST2H3A-201ENST00000403683 FANCD2Q9BXW9 1451 aa42.22■■■■■ 4.35
HIST2H3A-201ENST00000403683 WRNQ14191 1432 aaPredicted RBP eCLIP42.22■■■■■ 4.35
HIST2H3A-201ENST00000403683 PDS5BQ9NTI5 1447 aa42.19■■■■■ 4.34
HIST2H3A-201ENST00000403683 CEP164Q9UPV0 1460 aa42.03■■■■■ 4.32
HIST2H3A-201ENST00000403683 SYNJ1O43426 1573 aa41.98■■■■■ 4.31
HIST2H3A-201ENST00000403683 CUX1P39880 1505 aa41.89■■■■■ 4.3
HIST2H3A-201ENST00000403683 KIF21AQ7Z4S6 1674 aa41.89■■■■■ 4.3
HIST2H3A-201ENST00000403683 TOP2BQ02880 1626 aa41.86■■■■■ 4.29
HIST2H3A-201ENST00000403683 ERCC6Q03468 1493 aa41.81■■■■■ 4.28
HIST2H3A-201ENST00000403683 BIVM-ERCC5R4GMW8 1640 aa41.79■■■■■ 4.28
HIST2H3A-201ENST00000403683 DNMBPQ6XZF7 1577 aa41.7■■■■■ 4.27
HIST2H3A-201ENST00000403683 FAM9AQ8IZU1 332 aaPredicted RBP41.68■■■■■ 4.26
HIST2H3A-201ENST00000403683 TOPBP1Q92547 1522 aa41.67■■■■■ 4.26
HIST2H3A-201ENST00000403683 URB2Q14146 1524 aaKnown RBP41.67■■■■■ 4.26
HIST2H3A-201ENST00000403683 MRC2Q9UBG0 1479 aa41.62■■■■■ 4.25
HIST2H3A-201ENST00000403683 FGD5Q6ZNL6 1462 aa41.56■■■■■ 4.24
HIST2H3A-201ENST00000403683 SOGA1O94964 1423 aa41.5■■■■■ 4.23
HIST2H3A-201ENST00000403683 POLA1P09884 1462 aaPredicted RBP41.43■■■■■ 4.22
HIST2H3A-201ENST00000403683 WDR62O43379 1518 aa41.35■■■■■ 4.21
HIST2H3A-201ENST00000403683 RUSC2Q8N2Y8 1516 aa41.35■■■■■ 4.21
HIST2H3A-201ENST00000403683 EEA1Q15075 1411 aa41.33■■■■■ 4.21
HIST2H3A-201ENST00000403683 RAD54L2Q9Y4B4 1467 aa41.32■■■■■ 4.21
HIST2H3A-201ENST00000403683 THOC2Q8NI27 1593 aaKnown RBP41.32■■■■■ 4.2
HIST2H3A-201ENST00000403683 CUX2O14529 1486 aa41.24■■■■■ 4.19
HIST2H3A-201ENST00000403683 CSRNP3Q8WYN3 585 aa41.24■■■■■ 4.19
HIST2H3A-201ENST00000403683 KIF27Q86VH2 1401 aa41.24■■■■■ 4.19
HIST2H3A-201ENST00000403683 LOC105371045A0A1W2PR82 267 aa41.17■■■■■ 4.18
HIST2H3A-201ENST00000403683 EHMT2Q96KQ7 1210 aa41.16■■■■■ 4.18
HIST2H3A-201ENST00000403683 ABCA10Q8WWZ4 1543 aa41.15■■■■■ 4.18
HIST2H3A-201ENST00000403683 IFT140Q96RY7 1462 aa41.04■■■■■ 4.16
HIST2H3A-201ENST00000403683 TARBP1Q13395 1621 aaKnown RBP41.02■■■■■ 4.16
HIST2H3A-201ENST00000403683 TDRD9Q8NDG6 1382 aaKnown RBP41.02■■■■■ 4.16
HIST2H3A-201ENST00000403683 WDR97A6NE52 1622 aa40.96■■■■■ 4.15
HIST2H3A-201ENST00000403683 IGF1RP08069 1367 aa40.89■■■■■ 4.14
HIST2H3A-201ENST00000403683 GAPVD1Q14C86 1478 aa40.87■■■■■ 4.13
HIST2H3A-201ENST00000403683 AQRO60306 1485 aaKnown RBP eCLIP40.82■■■■■ 4.13
HIST2H3A-201ENST00000403683 ABCA5Q8WWZ7 1642 aa40.8■■■■■ 4.12
HIST2H3A-201ENST00000403683 ZNF608Q9ULD9 1512 aaPredicted RBP40.8■■■■■ 4.12
HIST2H3A-201ENST00000403683 UBTFP17480 764 aaKnown RBP40.77■■■■■ 4.12
HIST2H3A-201ENST00000403683 GOLGA3Q08378 1498 aa40.75■■■■■ 4.11
HIST2H3A-201ENST00000403683 KIF21BO75037 1637 aa40.74■■■■■ 4.11
HIST2H3A-201ENST00000403683 PRXQ9BXM0 1461 aa40.72■■■■■ 4.11
HIST2H3A-201ENST00000403683 CARMIL1Q5VZK9 1371 aa40.72■■■■■ 4.11
HIST2H3A-201ENST00000403683 RAPGEF2Q9Y4G8 1499 aa40.68■■■■■ 4.1
HIST2H3A-201ENST00000403683 ERICH3Q5RHP9 1530 aa40.67■■■■■ 4.1
HIST2H3A-201ENST00000403683 GRIN2BQ13224 1484 aa40.64■■■■■ 4.1
HIST2H3A-201ENST00000403683 EIF4G3O43432 1585 aaKnown RBP40.62■■■■■ 4.09
HIST2H3A-201ENST00000403683 PBRM1Q86U86 1689 aa40.58■■■■■ 4.09
HIST2H3A-201ENST00000403683 CUL7Q14999 1698 aa40.57■■■■■ 4.09
HIST2H3A-201ENST00000403683 TNIKQ9UKE5 1360 aa40.51■■■■■ 4.08
HIST2H3A-201ENST00000403683 FHAD1B1AJZ9 1412 aa40.42■■■■■ 4.06
HIST2H3A-201ENST00000403683 SNAPC4Q5SXM2 1469 aa40.42■■■■■ 4.06
HIST2H3A-201ENST00000403683 ADAMTS12P58397 1594 aa40.34■■■■■ 4.05
HIST2H3A-201ENST00000403683 MAGI1Q96QZ7 1491 aaPredicted RBP40.33■■■■■ 4.05
HIST2H3A-201ENST00000403683 RANGAP1P46060 587 aaPredicted RBP40.31■■■■■ 4.04
HIST2H3A-201ENST00000403683 FBLN2P98095 1184 aa40.28■■■■■ 4.04
HIST2H3A-201ENST00000403683 CHMP7Q8WUX9 453 aaPredicted RBP40.27■■■■■ 4.04
HIST2H3A-201ENST00000403683 CEP162Q5TB80 1403 aa40.26■■■■■ 4.04
HIST2H3A-201ENST00000403683 SYNJ2O15056 1496 aa40.18■■■■■ 4.02
HIST2H3A-201ENST00000403683 CLIP1P30622 1438 aa40.11■■■■■ 4.01
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms