Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 HES6-204ENST00000409182 863 ntTSL 2 BASIC23.24■■□□□ 1.31
PCDHGA3Q9Y5H0 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
PCDHGA3Q9Y5H0 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHGA3Q9Y5H0 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHGA3Q9Y5H0 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHGA3Q9Y5H0 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
PCDHGA3Q9Y5H0 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC23.23■■□□□ 1.31
PCDHGA3Q9Y5H0 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHGA3Q9Y5H0 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHGA3Q9Y5H0 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC23.23■■□□□ 1.31
PCDHGA3Q9Y5H0 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC23.23■■□□□ 1.31
PCDHGA3Q9Y5H0 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHGA3Q9Y5H0 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
PCDHGA3Q9Y5H0 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHGA3Q9Y5H0 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.21■■□□□ 1.31
PCDHGA3Q9Y5H0 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHGA3Q9Y5H0 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHGA3Q9Y5H0 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHGA3Q9Y5H0 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC23.21■■□□□ 1.31
PCDHGA3Q9Y5H0 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHGA3Q9Y5H0 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHGA3Q9Y5H0 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC23.2■■□□□ 1.3
PCDHGA3Q9Y5H0 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHGA3Q9Y5H0 AC087393.1-201ENST00000582896 145 ntBASIC23.2■■□□□ 1.3
PCDHGA3Q9Y5H0 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHGA3Q9Y5H0 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHGA3Q9Y5H0 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHGA3Q9Y5H0 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHGA3Q9Y5H0 AC103724.3-201ENST00000564481 992 ntBASIC23.19■■□□□ 1.3
PCDHGA3Q9Y5H0 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC23.19■■□□□ 1.3
PCDHGA3Q9Y5H0 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
PCDHGA3Q9Y5H0 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHGA3Q9Y5H0 BX255925.1-201ENST00000566954 1854 ntBASIC23.18■■□□□ 1.3
PCDHGA3Q9Y5H0 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHGA3Q9Y5H0 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC23.18■■□□□ 1.3
PCDHGA3Q9Y5H0 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHGA3Q9Y5H0 AL031848.2-201ENST00000607670 837 ntBASIC23.18■■□□□ 1.3
PCDHGA3Q9Y5H0 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHGA3Q9Y5H0 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHGA3Q9Y5H0 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHGA3Q9Y5H0 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC23.17■■□□□ 1.3
PCDHGA3Q9Y5H0 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
PCDHGA3Q9Y5H0 GUSBP5-201ENST00000418136 578 ntBASIC23.17■■□□□ 1.3
PCDHGA3Q9Y5H0 OR2A1-AS1-204ENST00000470435 602 ntBASIC23.17■■□□□ 1.3
PCDHGA3Q9Y5H0 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC23.17■■□□□ 1.3
PCDHGA3Q9Y5H0 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHGA3Q9Y5H0 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHGA3Q9Y5H0 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHGA3Q9Y5H0 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHGA3Q9Y5H0 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHGA3Q9Y5H0 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC23.16■■□□□ 1.3
PCDHGA3Q9Y5H0 PRTG-204ENST00000561292 833 ntTSL 3 BASIC23.16■■□□□ 1.3
PCDHGA3Q9Y5H0 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHGA3Q9Y5H0 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
PCDHGA3Q9Y5H0 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHGA3Q9Y5H0 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.16■■□□□ 1.3
PCDHGA3Q9Y5H0 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHGA3Q9Y5H0 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.15■■□□□ 1.3
PCDHGA3Q9Y5H0 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
PCDHGA3Q9Y5H0 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHGA3Q9Y5H0 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
PCDHGA3Q9Y5H0 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHGA3Q9Y5H0 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
PCDHGA3Q9Y5H0 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC23.14■■□□□ 1.3
PCDHGA3Q9Y5H0 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHGA3Q9Y5H0 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHGA3Q9Y5H0 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC23.14■■□□□ 1.29
PCDHGA3Q9Y5H0 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHGA3Q9Y5H0 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHGA3Q9Y5H0 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC23.13■■□□□ 1.29
PCDHGA3Q9Y5H0 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.13■■□□□ 1.29
PCDHGA3Q9Y5H0 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHGA3Q9Y5H0 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC23.13■■□□□ 1.29
PCDHGA3Q9Y5H0 RPS2P7-201ENST00000447334 885 ntBASIC23.13■■□□□ 1.29
PCDHGA3Q9Y5H0 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC23.13■■□□□ 1.29
PCDHGA3Q9Y5H0 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHGA3Q9Y5H0 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
PCDHGA3Q9Y5H0 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHGA3Q9Y5H0 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHGA3Q9Y5H0 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
PCDHGA3Q9Y5H0 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.12■■□□□ 1.29
PCDHGA3Q9Y5H0 AL449106.1-201ENST00000608517 1980 ntBASIC23.12■■□□□ 1.29
PCDHGA3Q9Y5H0 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHGA3Q9Y5H0 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHGA3Q9Y5H0 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
PCDHGA3Q9Y5H0 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHGA3Q9Y5H0 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHGA3Q9Y5H0 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
PCDHGA3Q9Y5H0 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.11■■□□□ 1.29
PCDHGA3Q9Y5H0 SHF-208ENST00000560734 1731 ntTSL 3 BASIC23.11■■□□□ 1.29
PCDHGA3Q9Y5H0 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC23.11■■□□□ 1.29
PCDHGA3Q9Y5H0 LONRF2P2-201ENST00000439212 571 ntBASIC23.11■■□□□ 1.29
PCDHGA3Q9Y5H0 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC23.11■■□□□ 1.29
PCDHGA3Q9Y5H0 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
PCDHGA3Q9Y5H0 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
PCDHGA3Q9Y5H0 AL592295.1-201ENST00000400984 884 ntBASIC23.1■■□□□ 1.29
PCDHGA3Q9Y5H0 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHGA3Q9Y5H0 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHGA3Q9Y5H0 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHGA3Q9Y5H0 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms