RNA–Protein interactions for RNA: ENST00000561878.1

TMEM170A-202, Transcript of transmembrane protein 170A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM170A, Length 1,072 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-202ENST00000561878 NISCHQ9Y2I1 1504 aa58.14■■■■■ 6.9
TMEM170A-202ENST00000561878 CCDC180Q9P1Z9 1646 aa52.08■■■■■ 5.93
TMEM170A-202ENST00000561878 ABCC9O60706 1549 aa51.59■■■■■ 5.85
TMEM170A-202ENST00000561878 RB1CC1Q8TDY2 1594 aa49.37■■■■■ 5.49
TMEM170A-202ENST00000561878 NACADO15069 1562 aa49.13■■■■■ 5.46
TMEM170A-202ENST00000561878 DCAF8L2P0C7V8 631 aa48.86■■■■■ 5.41
TMEM170A-202ENST00000561878 MYO15BQ96JP2 1530 aa48.59■■■■■ 5.37
TMEM170A-202ENST00000561878 ZCCHC6Q5VYS8 1495 aaKnown RBP48.28■■■■■ 5.32
TMEM170A-202ENST00000561878 UNC13AQ9UPW8 1703 aa48.22■■■■■ 5.31
TMEM170A-202ENST00000561878 DCAF1Q9Y4B6 1507 aa48.1■■■■■ 5.29
TMEM170A-202ENST00000561878 PABPN1Q86U42 306 aaKnown RBP eCLIP48.04■■■■■ 5.28
TMEM170A-202ENST00000561878 DNAJC5BQ9UF47 199 aa47.93■■■■■ 5.26
TMEM170A-202ENST00000561878 BICRAQ9NZM4 1560 aa47.83■■■■■ 5.25
TMEM170A-202ENST00000561878 SCRIBQ14160 1630 aa47.41■■■■■ 5.18
TMEM170A-202ENST00000561878 SHROOM4Q9ULL8 1493 aa47.36■■■■■ 5.17
TMEM170A-202ENST00000561878 EIF4G1Q04637 1599 aaKnown RBP46.67■■■■■ 5.06
TMEM170A-202ENST00000561878 CC2D2AQ9P2K1 1620 aa46.66■■■■■ 5.06
TMEM170A-202ENST00000561878 CECR2Q9BXF3 1484 aa46.46■■■■■ 5.03
TMEM170A-202ENST00000561878 NCAPD3P42695 1498 aa45.29■■■■■ 4.84
TMEM170A-202ENST00000561878 SMARCA4P51532 1647 aa45.29■■■■■ 4.84
TMEM170A-202ENST00000561878 ATAD2BQ9ULI0 1458 aa45.21■■■■■ 4.83
TMEM170A-202ENST00000561878 SMARCA2P51531 1590 aa45.17■■■■■ 4.82
TMEM170A-202ENST00000561878 BAZ1AQ9NRL2 1556 aaPredicted RBP45.16■■■■■ 4.82
TMEM170A-202ENST00000561878 HMGXB3Q12766 1538 aa45.05■■■■■ 4.8
TMEM170A-202ENST00000561878 PEG3Q9GZU2 1588 aa44.86■■■■■ 4.77
TMEM170A-202ENST00000561878 BAZ1BQ9UIG0 1483 aaKnown RBP44.84■■■■■ 4.77
TMEM170A-202ENST00000561878 MROH2BQ7Z745 1585 aa44.77■■■■■ 4.76
TMEM170A-202ENST00000561878 ERCC6Q03468 1493 aa44.59■■■■■ 4.73
TMEM170A-202ENST00000561878 NESP48681 1621 aa44.4■■■■■ 4.7
TMEM170A-202ENST00000561878 CUX2O14529 1486 aa44.39■■■■■ 4.7
TMEM170A-202ENST00000561878 LAMC3Q9Y6N6 1575 aa44.27■■■■■ 4.68
TMEM170A-202ENST00000561878 WIZO95785 1651 aa44.27■■■■■ 4.68
TMEM170A-202ENST00000561878 PDS5BQ9NTI5 1447 aa43.99■■■■■ 4.63
TMEM170A-202ENST00000561878 RSF1Q96T23 1441 aaPredicted RBP43.99■■■■■ 4.63
TMEM170A-202ENST00000561878 THOC2Q8NI27 1593 aaKnown RBP43.95■■■■■ 4.63
TMEM170A-202ENST00000561878 CADPSQ9ULU8 1353 aa43.94■■■■■ 4.63
TMEM170A-202ENST00000561878 KIF21AQ7Z4S6 1674 aa43.91■■■■■ 4.62
TMEM170A-202ENST00000561878 DNAJC5Q9H3Z4 198 aa43.82■■■■■ 4.61
TMEM170A-202ENST00000561878 TOP2AP11388 1531 aaKnown RBP43.78■■■■■ 4.6
TMEM170A-202ENST00000561878 MRC2Q9UBG0 1479 aa43.57■■■■■ 4.57
TMEM170A-202ENST00000561878 CFTRP13569 1480 aa43.52■■■■■ 4.56
TMEM170A-202ENST00000561878 CEP164Q9UPV0 1460 aa43.5■■■■■ 4.55
TMEM170A-202ENST00000561878 FANCD2Q9BXW9 1451 aa43.45■■■■■ 4.55
TMEM170A-202ENST00000561878 WDR62O43379 1518 aa43.45■■■■■ 4.55
TMEM170A-202ENST00000561878 CCDC88BA6NC98 1476 aa43.23■■■■■ 4.51
TMEM170A-202ENST00000561878 PRDM2Q13029 1718 aa43.22■■■■■ 4.51
TMEM170A-202ENST00000561878 URB2Q14146 1524 aaKnown RBP43.03■■■■■ 4.48
TMEM170A-202ENST00000561878 ABCC8Q09428 1581 aa42.68■■■■■ 4.42
TMEM170A-202ENST00000561878 TOPBP1Q92547 1522 aa42.67■■■■■ 4.42
TMEM170A-202ENST00000561878 IFT140Q96RY7 1462 aa42.61■■■■■ 4.41
TMEM170A-202ENST00000561878 DNMBPQ6XZF7 1577 aa42.58■■■■■ 4.41
TMEM170A-202ENST00000561878 ZNF608Q9ULD9 1512 aaPredicted RBP42.41■■■■■ 4.38
TMEM170A-202ENST00000561878 OSCARQ8IYS5 282 aa42.37■■■■■ 4.37
TMEM170A-202ENST00000561878 SUPT5HO00267 1087 aaKnown RBP42.32■■■■■ 4.37
TMEM170A-202ENST00000561878 EIF4G3O43432 1585 aaKnown RBP42.27■■■■■ 4.36
TMEM170A-202ENST00000561878 TARBP1Q13395 1621 aaKnown RBP42.26■■■■■ 4.36
TMEM170A-202ENST00000561878 POLA1P09884 1462 aaPredicted RBP42.24■■■■■ 4.35
TMEM170A-202ENST00000561878 AQRO60306 1485 aaKnown RBP eCLIP42.09■■■■■ 4.33
TMEM170A-202ENST00000561878 SOGA1O94964 1423 aa42.07■■■■■ 4.33
TMEM170A-202ENST00000561878 TRIM41Q8WV44 630 aa42.07■■■■■ 4.33
TMEM170A-202ENST00000561878 CUX1P39880 1505 aa42.05■■■■■ 4.32
TMEM170A-202ENST00000561878 RAD54L2Q9Y4B4 1467 aa42.05■■■■■ 4.32
TMEM170A-202ENST00000561878 FGD5Q6ZNL6 1462 aa42.04■■■■■ 4.32
TMEM170A-202ENST00000561878 WDR97A6NE52 1622 aa41.95■■■■■ 4.31
TMEM170A-202ENST00000561878 TDRD9Q8NDG6 1382 aaKnown RBP41.89■■■■■ 4.3
TMEM170A-202ENST00000561878 CHD1O14646 1710 aa41.89■■■■■ 4.3
TMEM170A-202ENST00000561878 RIMBP3CA6NJZ7 1639 aa41.79■■■■■ 4.28
TMEM170A-202ENST00000561878 RIMBP3BA6NNM3 1639 aa41.79■■■■■ 4.28
TMEM170A-202ENST00000561878 RIMBP3Q9UFD9 1639 aa41.79■■■■■ 4.28
TMEM170A-202ENST00000561878 FBLN2P98095 1184 aa41.76■■■■■ 4.28
TMEM170A-202ENST00000561878 SNAPC4Q5SXM2 1469 aa41.72■■■■■ 4.27
TMEM170A-202ENST00000561878 ARHGEF11O15085 1522 aa41.69■■■■■ 4.27
TMEM170A-202ENST00000561878 GRIN2BQ13224 1484 aa41.69■■■■■ 4.26
TMEM170A-202ENST00000561878 MAGI1Q96QZ7 1491 aaPredicted RBP41.66■■■■■ 4.26
TMEM170A-202ENST00000561878 ABCA10Q8WWZ4 1543 aa41.61■■■■■ 4.25
TMEM170A-202ENST00000561878 GAPVD1Q14C86 1478 aa41.59■■■■■ 4.25
TMEM170A-202ENST00000561878 PBRM1Q86U86 1689 aa41.58■■■■■ 4.25
TMEM170A-202ENST00000561878 BIVM-ERCC5R4GMW8 1640 aa41.55■■■■■ 4.24
TMEM170A-202ENST00000561878 CHMP7Q8WUX9 453 aaPredicted RBP41.54■■■■■ 4.24
TMEM170A-202ENST00000561878 WRNQ14191 1432 aaPredicted RBP eCLIP41.53■■■■■ 4.24
TMEM170A-202ENST00000561878 TOP2BQ02880 1626 aa41.53■■■■■ 4.24
TMEM170A-202ENST00000561878 ABCA5Q8WWZ7 1642 aa41.52■■■■■ 4.24
TMEM170A-202ENST00000561878 SYNJ2O15056 1496 aa41.51■■■■■ 4.24
TMEM170A-202ENST00000561878 SYNJ1O43426 1573 aa41.47■■■■■ 4.23
TMEM170A-202ENST00000561878 CLASP1Q7Z460 1538 aa41.4■■■■■ 4.22
TMEM170A-202ENST00000561878 CYB5RLQ6IPT4 315 aa41.32■■■■■ 4.21
TMEM170A-202ENST00000561878 ARAP1Q96P48 1450 aa41.29■■■■■ 4.2
TMEM170A-202ENST00000561878 ADAMTS12P58397 1594 aa41.19■■■■■ 4.18
TMEM170A-202ENST00000561878 GRIN2AQ12879 1464 aa41.14■■■■■ 4.18
TMEM170A-202ENST00000561878 ERICH3Q5RHP9 1530 aa41.13■■■■■ 4.17
TMEM170A-202ENST00000561878 FHAD1B1AJZ9 1412 aa41.08■■■■■ 4.17
TMEM170A-202ENST00000561878 NUP160Q12769 1436 aa40.98■■■■■ 4.15
TMEM170A-202ENST00000561878 CEP170Q5SW79 1584 aa40.96■■■■■ 4.15
TMEM170A-202ENST00000561878 TRHP20396 242 aaPredicted RBP40.77■■■■■ 4.12
TMEM170A-202ENST00000561878 SHROOM2Q13796 1616 aa40.77■■■■■ 4.12
TMEM170A-202ENST00000561878 KIF27Q86VH2 1401 aa40.74■■■■■ 4.11
TMEM170A-202ENST00000561878 ERCC6L2Q5T890 1561 aa40.72■■■■■ 4.11
TMEM170A-202ENST00000561878 CUL7Q14999 1698 aa40.64■■■■■ 4.1
TMEM170A-202ENST00000561878 IGF1RP08069 1367 aa40.61■■■■■ 4.09
TMEM170A-202ENST00000561878 RUSC2Q8N2Y8 1516 aa40.6■■■■■ 4.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms