Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DUX3Q96PT4 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC18.62■□□□□ 0.57
DUX3Q96PT4 AL451085.2-201ENST00000605085 799 ntBASIC18.62■□□□□ 0.57
DUX3Q96PT4 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC18.62■□□□□ 0.57
DUX3Q96PT4 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC18.62■□□□□ 0.57
DUX3Q96PT4 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC18.62■□□□□ 0.57
DUX3Q96PT4 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DUX3Q96PT4 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC18.61■□□□□ 0.57
DUX3Q96PT4 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
DUX3Q96PT4 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DUX3Q96PT4 YBX1P4-201ENST00000392794 808 ntBASIC18.61■□□□□ 0.57
DUX3Q96PT4 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC18.61■□□□□ 0.57
DUX3Q96PT4 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC18.61■□□□□ 0.57
DUX3Q96PT4 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC18.61■□□□□ 0.57
DUX3Q96PT4 AC074183.2-201ENST00000623112 922 ntBASIC18.61■□□□□ 0.57
DUX3Q96PT4 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
DUX3Q96PT4 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DUX3Q96PT4 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
DUX3Q96PT4 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DUX3Q96PT4 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
DUX3Q96PT4 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
DUX3Q96PT4 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DUX3Q96PT4 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
DUX3Q96PT4 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DUX3Q96PT4 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
DUX3Q96PT4 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC18.6■□□□□ 0.57
DUX3Q96PT4 AC103834.1-201ENST00000520383 144 ntBASIC18.6■□□□□ 0.57
DUX3Q96PT4 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
DUX3Q96PT4 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC18.6■□□□□ 0.57
DUX3Q96PT4 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC18.6■□□□□ 0.57
DUX3Q96PT4 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DUX3Q96PT4 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DUX3Q96PT4 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DUX3Q96PT4 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
DUX3Q96PT4 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DUX3Q96PT4 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC18.59■□□□□ 0.57
DUX3Q96PT4 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
DUX3Q96PT4 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC18.58■□□□□ 0.57
DUX3Q96PT4 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC18.58■□□□□ 0.56
DUX3Q96PT4 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
DUX3Q96PT4 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
DUX3Q96PT4 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
DUX3Q96PT4 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
DUX3Q96PT4 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DUX3Q96PT4 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DUX3Q96PT4 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
DUX3Q96PT4 RPS2P7-201ENST00000447334 885 ntBASIC18.57■□□□□ 0.56
DUX3Q96PT4 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
DUX3Q96PT4 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC18.57■□□□□ 0.56
DUX3Q96PT4 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
DUX3Q96PT4 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC18.57■□□□□ 0.56
DUX3Q96PT4 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC18.57■□□□□ 0.56
DUX3Q96PT4 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
DUX3Q96PT4 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
DUX3Q96PT4 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DUX3Q96PT4 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC18.56■□□□□ 0.56
DUX3Q96PT4 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
DUX3Q96PT4 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DUX3Q96PT4 PKM-203ENST00000389093 2279 ntTSL 5 BASIC18.55■□□□□ 0.56
DUX3Q96PT4 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DUX3Q96PT4 AC087393.1-201ENST00000582896 145 ntBASIC18.55■□□□□ 0.56
DUX3Q96PT4 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DUX3Q96PT4 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
DUX3Q96PT4 AL035685.1-201ENST00000636663 812 ntBASIC18.55■□□□□ 0.56
DUX3Q96PT4 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC18.54■□□□□ 0.56
DUX3Q96PT4 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DUX3Q96PT4 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
DUX3Q96PT4 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DUX3Q96PT4 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC18.54■□□□□ 0.56
DUX3Q96PT4 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
DUX3Q96PT4 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC18.54■□□□□ 0.56
DUX3Q96PT4 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
DUX3Q96PT4 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DUX3Q96PT4 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
DUX3Q96PT4 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DUX3Q96PT4 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DUX3Q96PT4 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
DUX3Q96PT4 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DUX3Q96PT4 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DUX3Q96PT4 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
DUX3Q96PT4 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
DUX3Q96PT4 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
DUX3Q96PT4 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC18.52■□□□□ 0.56
DUX3Q96PT4 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
DUX3Q96PT4 IDNK-201ENST00000376417 511 ntTSL 5 BASIC18.52■□□□□ 0.56
DUX3Q96PT4 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
DUX3Q96PT4 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC18.52■□□□□ 0.56
DUX3Q96PT4 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
DUX3Q96PT4 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
DUX3Q96PT4 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
DUX3Q96PT4 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DUX3Q96PT4 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DUX3Q96PT4 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
DUX3Q96PT4 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
DUX3Q96PT4 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC18.51■□□□□ 0.55
DUX3Q96PT4 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DUX3Q96PT4 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
DUX3Q96PT4 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC18.51■□□□□ 0.55
DUX3Q96PT4 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DUX3Q96PT4 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 9 ms