RNA–Protein interactions for RNA: ENST00000590526.5

RTN2-208, Transcript of reticulon 2, humanhuman

TSL 5 BASIC

Gene RTN2, Length 2,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN2-208ENST00000590526 NISCHQ9Y2I1 1504 aa53.8■■■■■ 6.2
RTN2-208ENST00000590526 CCDC180Q9P1Z9 1646 aa46.26■■■■■ 5
RTN2-208ENST00000590526 ZCCHC6Q5VYS8 1495 aaKnown RBP45.3■■■■■ 4.84
RTN2-208ENST00000590526 SHROOM4Q9ULL8 1493 aa45.23■■■■■ 4.83
RTN2-208ENST00000590526 DCAF8L2P0C7V8 631 aa44.96■■■■■ 4.79
RTN2-208ENST00000590526 DCAF1Q9Y4B6 1507 aa44.05■■■■■ 4.64
RTN2-208ENST00000590526 ABCC9O60706 1549 aa43.81■■■■■ 4.6
RTN2-208ENST00000590526 SUPT5HO00267 1087 aaKnown RBP43.79■■■■■ 4.6
RTN2-208ENST00000590526 SCRIBQ14160 1630 aa43.28■■■■■ 4.52
RTN2-208ENST00000590526 MYO15BQ96JP2 1530 aa43.13■■■■■ 4.49
RTN2-208ENST00000590526 NACADO15069 1562 aa42.95■■■■■ 4.47
RTN2-208ENST00000590526 RB1CC1Q8TDY2 1594 aa42.51■■■■■ 4.4
RTN2-208ENST00000590526 RSF1Q96T23 1441 aaPredicted RBP42.16■■■■■ 4.34
RTN2-208ENST00000590526 CECR2Q9BXF3 1484 aa42.12■■■■■ 4.33
RTN2-208ENST00000590526 UNC13AQ9UPW8 1703 aa42.1■■■■■ 4.33
RTN2-208ENST00000590526 CHIC1Q5VXU3 224 aa42.01■■■■■ 4.32
RTN2-208ENST00000590526 MROH2BQ7Z745 1585 aa41.84■■■■■ 4.29
RTN2-208ENST00000590526 PABPN1Q86U42 306 aaKnown RBP eCLIP41.68■■■■■ 4.26
RTN2-208ENST00000590526 WIZO95785 1651 aa41.63■■■■■ 4.26
RTN2-208ENST00000590526 BICRAQ9NZM4 1560 aa41.48■■■■■ 4.23
RTN2-208ENST00000590526 BAZ1AQ9NRL2 1556 aaPredicted RBP41.37■■■■■ 4.21
RTN2-208ENST00000590526 SMARCA4P51532 1647 aa41.25■■■■■ 4.19
RTN2-208ENST00000590526 TOP2AP11388 1531 aaKnown RBP40.84■■■■■ 4.13
RTN2-208ENST00000590526 LOC105371045A0A1W2PR82 267 aa40.82■■■■■ 4.13
RTN2-208ENST00000590526 TRIM41Q8WV44 630 aa40.78■■■■■ 4.12
RTN2-208ENST00000590526 CCDC88BA6NC98 1476 aa40.66■■■■■ 4.1
RTN2-208ENST00000590526 SMARCA2P51531 1590 aa40.64■■■■■ 4.1
RTN2-208ENST00000590526 EIF4G1Q04637 1599 aaKnown RBP40.55■■■■■ 4.08
RTN2-208ENST00000590526 FAM9AQ8IZU1 332 aaPredicted RBP40.54■■■■■ 4.08
RTN2-208ENST00000590526 PEG3Q9GZU2 1588 aa40.42■■■■■ 4.06
RTN2-208ENST00000590526 ATAD2BQ9ULI0 1458 aa40.39■■■■■ 4.06
RTN2-208ENST00000590526 ABCC8Q09428 1581 aa40.32■■■■■ 4.05
RTN2-208ENST00000590526 EHMT2Q96KQ7 1210 aa40.32■■■■■ 4.04
RTN2-208ENST00000590526 BAZ1BQ9UIG0 1483 aaKnown RBP40.21■■■■■ 4.03
RTN2-208ENST00000590526 NCAPD3P42695 1498 aa39.72■■■■□ 3.95
RTN2-208ENST00000590526 PCGF6Q9BYE7 350 aa39.66■■■■□ 3.94
RTN2-208ENST00000590526 SOGA1O94964 1423 aa39.66■■■■□ 3.94
RTN2-208ENST00000590526 HMGXB3Q12766 1538 aa39.66■■■■□ 3.94
RTN2-208ENST00000590526 WRNQ14191 1432 aaPredicted RBP eCLIP39.62■■■■□ 3.93
RTN2-208ENST00000590526 RUSC2Q8N2Y8 1516 aa39.59■■■■□ 3.93
RTN2-208ENST00000590526 SYNJ1O43426 1573 aa39.59■■■■□ 3.93
RTN2-208ENST00000590526 CC2D2AQ9P2K1 1620 aa39.45■■■■□ 3.91
RTN2-208ENST00000590526 CSRNP3Q8WYN3 585 aa39.23■■■■□ 3.87
RTN2-208ENST00000590526 CFTRP13569 1480 aa39.14■■■■□ 3.86
RTN2-208ENST00000590526 PPARGC1BQ86YN6 1023 aaKnown RBP39.13■■■■□ 3.85
RTN2-208ENST00000590526 TOP2BQ02880 1626 aa39.11■■■■□ 3.85
RTN2-208ENST00000590526 EEA1Q15075 1411 aa39.06■■■■□ 3.84
RTN2-208ENST00000590526 TRIM26Q12899 539 aaPredicted RBP39.03■■■■□ 3.84
RTN2-208ENST00000590526 UBTFP17480 764 aaKnown RBP39.02■■■■□ 3.84
RTN2-208ENST00000590526 CUX1P39880 1505 aa39.02■■■■□ 3.84
RTN2-208ENST00000590526 BIVM-ERCC5R4GMW8 1640 aa39.02■■■■□ 3.84
RTN2-208ENST00000590526 PRDM2Q13029 1718 aa38.93■■■■□ 3.82
RTN2-208ENST00000590526 CEP162Q5TB80 1403 aa38.92■■■■□ 3.82
RTN2-208ENST00000590526 CADPSQ9ULU8 1353 aa38.9■■■■□ 3.82
RTN2-208ENST00000590526 DNAJC5BQ9UF47 199 aa38.86■■■■□ 3.81
RTN2-208ENST00000590526 GOLGA3Q08378 1498 aa38.86■■■■□ 3.81
RTN2-208ENST00000590526 TNIKQ9UKE5 1360 aa38.86■■■■□ 3.81
RTN2-208ENST00000590526 HRCP23327 699 aa38.82■■■■□ 3.81
RTN2-208ENST00000590526 NESP48681 1621 aa38.76■■■■□ 3.79
RTN2-208ENST00000590526 RAPGEF2Q9Y4G8 1499 aa38.73■■■■□ 3.79
RTN2-208ENST00000590526 KIF21BO75037 1637 aa38.73■■■■□ 3.79
RTN2-208ENST00000590526 CEP164Q9UPV0 1460 aa38.73■■■■□ 3.79
RTN2-208ENST00000590526 TTBK1Q5TCY1 1321 aaPredicted RBP38.71■■■■□ 3.79
RTN2-208ENST00000590526 RANGAP1P46060 587 aaPredicted RBP38.68■■■■□ 3.78
RTN2-208ENST00000590526 FANCD2Q9BXW9 1451 aa38.58■■■■□ 3.77
RTN2-208ENST00000590526 FGD5Q6ZNL6 1462 aa38.47■■■■□ 3.75
RTN2-208ENST00000590526 KIF27Q86VH2 1401 aa38.45■■■■□ 3.75
RTN2-208ENST00000590526 CLIP1P30622 1438 aa38.4■■■■□ 3.74
RTN2-208ENST00000590526 PRXQ9BXM0 1461 aa38.39■■■■□ 3.74
RTN2-208ENST00000590526 CUX2O14529 1486 aa38.39■■■■□ 3.74
RTN2-208ENST00000590526 RAD54L2Q9Y4B4 1467 aa38.25■■■■□ 3.71
RTN2-208ENST00000590526 ERICH3Q5RHP9 1530 aa38.25■■■■□ 3.71
RTN2-208ENST00000590526 LAMC3Q9Y6N6 1575 aa38.23■■■■□ 3.71
RTN2-208ENST00000590526 TOPBP1Q92547 1522 aa38.23■■■■□ 3.71
RTN2-208ENST00000590526 DNMBPQ6XZF7 1577 aa38.21■■■■□ 3.71
RTN2-208ENST00000590526 IGF1RP08069 1367 aa38.17■■■■□ 3.7
RTN2-208ENST00000590526 POLA1P09884 1462 aaPredicted RBP38.14■■■■□ 3.7
RTN2-208ENST00000590526 KIF21AQ7Z4S6 1674 aa38.13■■■■□ 3.7
RTN2-208ENST00000590526 URB2Q14146 1524 aaKnown RBP38.13■■■■□ 3.69
RTN2-208ENST00000590526 VPS8Q8N3P4 1428 aa38.07■■■■□ 3.68
RTN2-208ENST00000590526 CARMIL1Q5VZK9 1371 aa37.99■■■■□ 3.67
RTN2-208ENST00000590526 ARAP1Q96P48 1450 aa37.97■■■■□ 3.67
RTN2-208ENST00000590526 PDS5BQ9NTI5 1447 aa37.97■■■■□ 3.67
RTN2-208ENST00000590526 ABCA10Q8WWZ4 1543 aa37.93■■■■□ 3.66
RTN2-208ENST00000590526 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.86■■■■□ 3.65
RTN2-208ENST00000590526 TDRD9Q8NDG6 1382 aaKnown RBP37.82■■■■□ 3.65
RTN2-208ENST00000590526 ARHGAP35Q9NRY4 1499 aa37.81■■■■□ 3.64
RTN2-208ENST00000590526 WDR97A6NE52 1622 aa37.8■■■■□ 3.64
RTN2-208ENST00000590526 APLP2Q06481 763 aa37.79■■■■□ 3.64
RTN2-208ENST00000590526 P3H3Q8IVL6 736 aa37.65■■■■□ 3.62
RTN2-208ENST00000590526 KANK4Q5T7N3 995 aaPredicted RBP37.65■■■■□ 3.62
RTN2-208ENST00000590526 ABCA5Q8WWZ7 1642 aa37.61■■■■□ 3.61
RTN2-208ENST00000590526 HNRNPUL2Q1KMD3 747 aaKnown RBP37.58■■■■□ 3.61
RTN2-208ENST00000590526 CCER1Q8TC90 406 aaPredicted RBP37.58■■■■□ 3.61
RTN2-208ENST00000590526 GAPVD1Q14C86 1478 aa37.57■■■■□ 3.61
RTN2-208ENST00000590526 TARBP1Q13395 1621 aaKnown RBP37.57■■■■□ 3.61
RTN2-208ENST00000590526 CUL7Q14999 1698 aa37.56■■■■□ 3.6
RTN2-208ENST00000590526 ZEB1P37275 1124 aaPredicted RBP37.54■■■■□ 3.6
RTN2-208ENST00000590526 MRC2Q9UBG0 1479 aa37.5■■■■□ 3.59
RTN2-208ENST00000590526 CTTNBP2Q8WZ74 1663 aa37.44■■■■□ 3.58
Retrieved 100 of 20,778 RNA–protein pairs in 153.4 ms