Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.25
CHGBP05060 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC29.13■■■□□ 2.25
CHGBP05060 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC29.13■■■□□ 2.25
CHGBP05060 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC29.13■■■□□ 2.25
CHGBP05060 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
CHGBP05060 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
CHGBP05060 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
CHGBP05060 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC29.12■■■□□ 2.25
CHGBP05060 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
CHGBP05060 AC092803.2-201ENST00000564287 1899 ntBASIC29.12■■■□□ 2.25
CHGBP05060 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC29.12■■■□□ 2.25
CHGBP05060 AC096887.2-201ENST00000623443 1957 ntBASIC29.12■■■□□ 2.25
CHGBP05060 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
CHGBP05060 TSPY13P-201ENST00000338964 914 ntBASIC29.11■■■□□ 2.25
CHGBP05060 GUK1-208ENST00000366728 842 ntTSL 2 BASIC29.11■■■□□ 2.25
CHGBP05060 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
CHGBP05060 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC29.1■■■□□ 2.25
CHGBP05060 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC29.1■■■□□ 2.25
CHGBP05060 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
CHGBP05060 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC29.09■■■□□ 2.25
CHGBP05060 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC29.09■■■□□ 2.25
CHGBP05060 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC29.09■■■□□ 2.25
CHGBP05060 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
CHGBP05060 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
CHGBP05060 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC29.08■■■□□ 2.25
CHGBP05060 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC29.07■■■□□ 2.24
CHGBP05060 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
CHGBP05060 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC29.07■■■□□ 2.24
CHGBP05060 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC29.07■■■□□ 2.24
CHGBP05060 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
CHGBP05060 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
CHGBP05060 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC29.06■■■□□ 2.24
CHGBP05060 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
CHGBP05060 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC29.05■■■□□ 2.24
CHGBP05060 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
CHGBP05060 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC29.05■■■□□ 2.24
CHGBP05060 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
CHGBP05060 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
CHGBP05060 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC29.05■■■□□ 2.24
CHGBP05060 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
CHGBP05060 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC29.05■■■□□ 2.24
CHGBP05060 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC29.05■■■□□ 2.24
CHGBP05060 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
CHGBP05060 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
CHGBP05060 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC29.04■■■□□ 2.24
CHGBP05060 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC29.04■■■□□ 2.24
CHGBP05060 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
CHGBP05060 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC29.04■■■□□ 2.24
CHGBP05060 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
CHGBP05060 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC29.03■■■□□ 2.24
CHGBP05060 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC29.03■■■□□ 2.24
CHGBP05060 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
CHGBP05060 MIR6765-201ENST00000614092 87 ntBASIC29.03■■■□□ 2.24
CHGBP05060 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC29.03■■■□□ 2.24
CHGBP05060 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC29.03■■■□□ 2.24
CHGBP05060 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC29.02■■■□□ 2.24
CHGBP05060 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
CHGBP05060 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC29.02■■■□□ 2.24
CHGBP05060 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC29.02■■■□□ 2.24
CHGBP05060 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC29.01■■■□□ 2.23
CHGBP05060 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC29■■■□□ 2.23
CHGBP05060 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC29■■■□□ 2.23
CHGBP05060 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
CHGBP05060 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
CHGBP05060 AC018755.3-202ENST00000596210 929 ntBASIC28.99■■■□□ 2.23
CHGBP05060 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC28.99■■■□□ 2.23
CHGBP05060 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
CHGBP05060 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC28.99■■■□□ 2.23
CHGBP05060 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC28.99■■■□□ 2.23
CHGBP05060 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC28.98■■■□□ 2.23
CHGBP05060 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
CHGBP05060 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC28.98■■■□□ 2.23
CHGBP05060 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC28.98■■■□□ 2.23
CHGBP05060 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC28.98■■■□□ 2.23
CHGBP05060 PVT1_1.1-201ENST00000615125 194 ntBASIC28.98■■■□□ 2.23
CHGBP05060 AC010501.1-201ENST00000606270 1962 ntBASIC28.98■■■□□ 2.23
CHGBP05060 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC28.98■■■□□ 2.23
CHGBP05060 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC28.98■■■□□ 2.23
CHGBP05060 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
CHGBP05060 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
CHGBP05060 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC28.97■■■□□ 2.23
CHGBP05060 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC28.97■■■□□ 2.23
CHGBP05060 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
CHGBP05060 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
CHGBP05060 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC28.96■■■□□ 2.23
CHGBP05060 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC28.96■■■□□ 2.23
CHGBP05060 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC28.96■■■□□ 2.23
CHGBP05060 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC28.96■■■□□ 2.23
CHGBP05060 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC28.96■■■□□ 2.23
CHGBP05060 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
CHGBP05060 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC28.96■■■□□ 2.23
CHGBP05060 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
CHGBP05060 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC28.95■■■□□ 2.23
CHGBP05060 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC28.95■■■□□ 2.22
CHGBP05060 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC28.95■■■□□ 2.22
CHGBP05060 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
CHGBP05060 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
CHGBP05060 IDNK-203ENST00000405990 629 ntTSL 2 BASIC28.94■■■□□ 2.22
CHGBP05060 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
CHGBP05060 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC28.94■■■□□ 2.22
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms