Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC41.49■■■■■ 4.23
CHGBP05060 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC40.7■■■■■ 4.11
CHGBP05060 AL356512.1-201ENST00000607453 1739 ntBASIC40.3■■■■■ 4.04
CHGBP05060 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC40.3■■■■■ 4.04
CHGBP05060 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC40.13■■■■■ 4.02
CHGBP05060 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC40.13■■■■■ 4.02
CHGBP05060 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC39.8■■■■□ 3.96
CHGBP05060 HES6-203ENST00000409160 1600 ntTSL 2 BASIC39.45■■■■□ 3.91
CHGBP05060 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC39.3■■■■□ 3.88
CHGBP05060 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC39.2■■■■□ 3.87
CHGBP05060 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC39.11■■■■□ 3.85
CHGBP05060 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC38.9■■■■□ 3.82
CHGBP05060 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC38.86■■■■□ 3.81
CHGBP05060 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC38.67■■■■□ 3.78
CHGBP05060 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC38.58■■■■□ 3.77
CHGBP05060 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC38.54■■■■□ 3.76
CHGBP05060 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC38.33■■■■□ 3.73
CHGBP05060 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC38.3■■■■□ 3.72
CHGBP05060 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC38.27■■■■□ 3.72
CHGBP05060 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC38.09■■■■□ 3.69
CHGBP05060 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC37.97■■■■□ 3.67
CHGBP05060 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC37.73■■■■□ 3.63
CHGBP05060 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC37.68■■■■□ 3.62
CHGBP05060 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC37.56■■■■□ 3.6
CHGBP05060 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC37.49■■■■□ 3.59
CHGBP05060 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC37.45■■■■□ 3.59
CHGBP05060 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC37.36■■■■□ 3.57
CHGBP05060 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC37.33■■■■□ 3.57
CHGBP05060 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC37.29■■■■□ 3.56
CHGBP05060 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC37.27■■■■□ 3.56
CHGBP05060 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC37.25■■■■□ 3.55
CHGBP05060 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC37.15■■■■□ 3.54
CHGBP05060 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC37.15■■■■□ 3.54
CHGBP05060 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC37.11■■■■□ 3.53
CHGBP05060 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC37.1■■■■□ 3.53
CHGBP05060 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC37.04■■■■□ 3.52
CHGBP05060 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC37.02■■■■□ 3.52
CHGBP05060 INO80B-203ENST00000409917 796 ntTSL 2 BASIC37.02■■■■□ 3.52
CHGBP05060 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC36.95■■■■□ 3.51
CHGBP05060 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC36.93■■■■□ 3.5
CHGBP05060 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC36.92■■■■□ 3.5
CHGBP05060 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC36.77■■■■□ 3.48
CHGBP05060 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC36.77■■■■□ 3.48
CHGBP05060 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC36.7■■■■□ 3.47
CHGBP05060 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC36.62■■■■□ 3.45
CHGBP05060 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC36.58■■■■□ 3.45
CHGBP05060 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC36.49■■■■□ 3.43
CHGBP05060 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC36.47■■■■□ 3.43
CHGBP05060 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC36.47■■■■□ 3.43
CHGBP05060 AC015813.7-201ENST00000623294 581 ntBASIC36.47■■■■□ 3.43
CHGBP05060 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC36.39■■■■□ 3.42
CHGBP05060 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC36.35■■■■□ 3.41
CHGBP05060 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC36.17■■■■□ 3.38
CHGBP05060 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC36.15■■■■□ 3.38
CHGBP05060 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC36.1■■■■□ 3.37
CHGBP05060 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC36.08■■■■□ 3.37
CHGBP05060 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC36.07■■■■□ 3.36
CHGBP05060 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC36.05■■■■□ 3.36
CHGBP05060 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC35.99■■■■□ 3.35
CHGBP05060 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC35.97■■■■□ 3.35
CHGBP05060 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC35.93■■■■□ 3.34
CHGBP05060 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC35.93■■■■□ 3.34
CHGBP05060 AC006077.2-201ENST00000623591 457 ntBASIC35.85■■■■□ 3.33
CHGBP05060 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC35.82■■■■□ 3.32
CHGBP05060 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC35.78■■■■□ 3.32
CHGBP05060 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC35.76■■■■□ 3.32
CHGBP05060 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC35.75■■■■□ 3.31
CHGBP05060 ZNRF2P1-201ENST00000441407 443 ntBASIC35.74■■■■□ 3.31
CHGBP05060 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC35.73■■■■□ 3.31
CHGBP05060 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC35.72■■■■□ 3.31
CHGBP05060 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC35.72■■■■□ 3.31
CHGBP05060 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC35.71■■■■□ 3.31
CHGBP05060 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC35.69■■■■□ 3.3
CHGBP05060 ILK-212ENST00000532063 1617 ntTSL 2 BASIC35.66■■■■□ 3.3
CHGBP05060 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC35.65■■■■□ 3.3
CHGBP05060 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC35.63■■■■□ 3.29
CHGBP05060 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC35.55■■■■□ 3.28
CHGBP05060 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC35.49■■■■□ 3.27
CHGBP05060 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC35.47■■■■□ 3.27
CHGBP05060 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC35.46■■■■□ 3.27
CHGBP05060 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC35.43■■■■□ 3.26
CHGBP05060 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC35.31■■■■□ 3.24
CHGBP05060 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC35.3■■■■□ 3.24
CHGBP05060 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC35.3■■■■□ 3.24
CHGBP05060 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC35.29■■■■□ 3.24
CHGBP05060 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC35.27■■■■□ 3.24
CHGBP05060 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC35.26■■■■□ 3.24
CHGBP05060 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC35.23■■■■□ 3.23
CHGBP05060 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC35.22■■■■□ 3.23
CHGBP05060 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC35.18■■■■□ 3.22
CHGBP05060 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC35.16■■■■□ 3.22
CHGBP05060 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC35.14■■■■□ 3.22
CHGBP05060 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC35.14■■■■□ 3.22
CHGBP05060 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC35.13■■■■□ 3.21
CHGBP05060 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC35.07■■■■□ 3.2
CHGBP05060 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC35.06■■■■□ 3.2
CHGBP05060 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
CHGBP05060 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC35.02■■■■□ 3.2
CHGBP05060 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC35■■■■□ 3.19
CHGBP05060 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC35■■■■□ 3.19
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms