RNA–Protein interactions for RNA: ENST00000378115.2

ARHGEF35-201, Transcript of Rho guanine nucleotide exchange factor 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARHGEF35, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF35-201ENST00000378115 NISCHQ9Y2I1 1504 aa52.4■■■■■ 5.98
ARHGEF35-201ENST00000378115 CCDC180Q9P1Z9 1646 aa45.04■■■■■ 4.8
ARHGEF35-201ENST00000378115 ZCCHC6Q5VYS8 1495 aaKnown RBP44.1■■■■■ 4.65
ARHGEF35-201ENST00000378115 SHROOM4Q9ULL8 1493 aa43.85■■■■■ 4.61
ARHGEF35-201ENST00000378115 DCAF8L2P0C7V8 631 aa43.71■■■■■ 4.59
ARHGEF35-201ENST00000378115 DCAF1Q9Y4B6 1507 aa42.97■■■■■ 4.47
ARHGEF35-201ENST00000378115 ABCC9O60706 1549 aa42.73■■■■■ 4.43
ARHGEF35-201ENST00000378115 SUPT5HO00267 1087 aaKnown RBP42.43■■■■■ 4.38
ARHGEF35-201ENST00000378115 MYO15BQ96JP2 1530 aa42.15■■■■■ 4.34
ARHGEF35-201ENST00000378115 SCRIBQ14160 1630 aa42.07■■■■■ 4.32
ARHGEF35-201ENST00000378115 NACADO15069 1562 aa41.9■■■■■ 4.3
ARHGEF35-201ENST00000378115 RB1CC1Q8TDY2 1594 aa41.46■■■■■ 4.23
ARHGEF35-201ENST00000378115 RSF1Q96T23 1441 aaPredicted RBP41.05■■■■■ 4.16
ARHGEF35-201ENST00000378115 CECR2Q9BXF3 1484 aa41.01■■■■■ 4.16
ARHGEF35-201ENST00000378115 UNC13AQ9UPW8 1703 aa40.87■■■■■ 4.13
ARHGEF35-201ENST00000378115 CHIC1Q5VXU3 224 aa40.74■■■■■ 4.11
ARHGEF35-201ENST00000378115 MROH2BQ7Z745 1585 aa40.72■■■■■ 4.11
ARHGEF35-201ENST00000378115 PABPN1Q86U42 306 aaKnown RBP eCLIP40.65■■■■■ 4.1
ARHGEF35-201ENST00000378115 BICRAQ9NZM4 1560 aa40.46■■■■■ 4.07
ARHGEF35-201ENST00000378115 WIZO95785 1651 aa40.43■■■■■ 4.06
ARHGEF35-201ENST00000378115 BAZ1AQ9NRL2 1556 aaPredicted RBP40.29■■■■■ 4.04
ARHGEF35-201ENST00000378115 SMARCA4P51532 1647 aa40.14■■■■■ 4.02
ARHGEF35-201ENST00000378115 TOP2AP11388 1531 aaKnown RBP39.74■■■■□ 3.95
ARHGEF35-201ENST00000378115 CCDC88BA6NC98 1476 aa39.59■■■■□ 3.93
ARHGEF35-201ENST00000378115 TRIM41Q8WV44 630 aa39.58■■■■□ 3.93
ARHGEF35-201ENST00000378115 LOC105371045A0A1W2PR82 267 aa39.53■■■■□ 3.92
ARHGEF35-201ENST00000378115 SMARCA2P51531 1590 aa39.52■■■■□ 3.92
ARHGEF35-201ENST00000378115 PEG3Q9GZU2 1588 aa39.42■■■■□ 3.9
ARHGEF35-201ENST00000378115 EIF4G1Q04637 1599 aaKnown RBP39.4■■■■□ 3.9
ARHGEF35-201ENST00000378115 ATAD2BQ9ULI0 1458 aa39.39■■■■□ 3.9
ARHGEF35-201ENST00000378115 FAM9AQ8IZU1 332 aaPredicted RBP39.26■■■■□ 3.88
ARHGEF35-201ENST00000378115 BAZ1BQ9UIG0 1483 aaKnown RBP39.18■■■■□ 3.86
ARHGEF35-201ENST00000378115 ABCC8Q09428 1581 aa39.12■■■■□ 3.85
ARHGEF35-201ENST00000378115 EHMT2Q96KQ7 1210 aa38.98■■■■□ 3.83
ARHGEF35-201ENST00000378115 NCAPD3P42695 1498 aa38.82■■■■□ 3.8
ARHGEF35-201ENST00000378115 HMGXB3Q12766 1538 aa38.69■■■■□ 3.78
ARHGEF35-201ENST00000378115 WRNQ14191 1432 aaPredicted RBP eCLIP38.55■■■■□ 3.76
ARHGEF35-201ENST00000378115 SOGA1O94964 1423 aa38.54■■■■□ 3.76
ARHGEF35-201ENST00000378115 CC2D2AQ9P2K1 1620 aa38.47■■■■□ 3.75
ARHGEF35-201ENST00000378115 SYNJ1O43426 1573 aa38.46■■■■□ 3.75
ARHGEF35-201ENST00000378115 RUSC2Q8N2Y8 1516 aa38.45■■■■□ 3.75
ARHGEF35-201ENST00000378115 PCGF6Q9BYE7 350 aa38.27■■■■□ 3.72
ARHGEF35-201ENST00000378115 CFTRP13569 1480 aa38.19■■■■□ 3.7
ARHGEF35-201ENST00000378115 CSRNP3Q8WYN3 585 aa38.14■■■■□ 3.7
ARHGEF35-201ENST00000378115 TOP2BQ02880 1626 aa38.04■■■■□ 3.68
ARHGEF35-201ENST00000378115 EEA1Q15075 1411 aa38■■■■□ 3.67
ARHGEF35-201ENST00000378115 CADPSQ9ULU8 1353 aa37.98■■■■□ 3.67
ARHGEF35-201ENST00000378115 DNAJC5BQ9UF47 199 aa37.98■■■■□ 3.67
ARHGEF35-201ENST00000378115 CUX1P39880 1505 aa37.97■■■■□ 3.67
ARHGEF35-201ENST00000378115 BIVM-ERCC5R4GMW8 1640 aa37.92■■■■□ 3.66
ARHGEF35-201ENST00000378115 UBTFP17480 764 aaKnown RBP37.86■■■■□ 3.65
ARHGEF35-201ENST00000378115 PPARGC1BQ86YN6 1023 aaKnown RBP37.82■■■■□ 3.64
ARHGEF35-201ENST00000378115 NESP48681 1621 aa37.78■■■■□ 3.64
ARHGEF35-201ENST00000378115 PRDM2Q13029 1718 aa37.76■■■■□ 3.63
ARHGEF35-201ENST00000378115 TRIM26Q12899 539 aaPredicted RBP37.76■■■■□ 3.63
ARHGEF35-201ENST00000378115 TNIKQ9UKE5 1360 aa37.75■■■■□ 3.63
ARHGEF35-201ENST00000378115 CEP162Q5TB80 1403 aa37.75■■■■□ 3.63
ARHGEF35-201ENST00000378115 GOLGA3Q08378 1498 aa37.73■■■■□ 3.63
ARHGEF35-201ENST00000378115 CEP164Q9UPV0 1460 aa37.64■■■■□ 3.62
ARHGEF35-201ENST00000378115 RAPGEF2Q9Y4G8 1499 aa37.63■■■■□ 3.61
ARHGEF35-201ENST00000378115 FANCD2Q9BXW9 1451 aa37.6■■■■□ 3.61
ARHGEF35-201ENST00000378115 KIF21BO75037 1637 aa37.6■■■■□ 3.61
ARHGEF35-201ENST00000378115 RANGAP1P46060 587 aaPredicted RBP37.47■■■■□ 3.59
ARHGEF35-201ENST00000378115 FGD5Q6ZNL6 1462 aa37.45■■■■□ 3.59
ARHGEF35-201ENST00000378115 HRCP23327 699 aa37.44■■■■□ 3.58
ARHGEF35-201ENST00000378115 KIF27Q86VH2 1401 aa37.43■■■■□ 3.58
ARHGEF35-201ENST00000378115 TTBK1Q5TCY1 1321 aaPredicted RBP37.4■■■■□ 3.58
ARHGEF35-201ENST00000378115 PRXQ9BXM0 1461 aa37.38■■■■□ 3.57
ARHGEF35-201ENST00000378115 CUX2O14529 1486 aa37.35■■■■□ 3.57
ARHGEF35-201ENST00000378115 LAMC3Q9Y6N6 1575 aa37.3■■■■□ 3.56
ARHGEF35-201ENST00000378115 CLIP1P30622 1438 aa37.28■■■■□ 3.56
ARHGEF35-201ENST00000378115 TOPBP1Q92547 1522 aa37.25■■■■□ 3.55
ARHGEF35-201ENST00000378115 RAD54L2Q9Y4B4 1467 aa37.25■■■■□ 3.55
ARHGEF35-201ENST00000378115 DNMBPQ6XZF7 1577 aa37.22■■■■□ 3.55
ARHGEF35-201ENST00000378115 IGF1RP08069 1367 aa37.2■■■■□ 3.55
ARHGEF35-201ENST00000378115 ERICH3Q5RHP9 1530 aa37.18■■■■□ 3.54
ARHGEF35-201ENST00000378115 URB2Q14146 1524 aaKnown RBP37.18■■■■□ 3.54
ARHGEF35-201ENST00000378115 POLA1P09884 1462 aaPredicted RBP37.17■■■■□ 3.54
ARHGEF35-201ENST00000378115 PDS5BQ9NTI5 1447 aa37.08■■■■□ 3.53
ARHGEF35-201ENST00000378115 KIF21AQ7Z4S6 1674 aa37.07■■■■□ 3.52
ARHGEF35-201ENST00000378115 CARMIL1Q5VZK9 1371 aa36.98■■■■□ 3.51
ARHGEF35-201ENST00000378115 ABCA10Q8WWZ4 1543 aa36.96■■■■□ 3.51
ARHGEF35-201ENST00000378115 VPS8Q8N3P4 1428 aa36.96■■■■□ 3.51
ARHGEF35-201ENST00000378115 ARAP1Q96P48 1450 aa36.88■■■■□ 3.49
ARHGEF35-201ENST00000378115 TDRD9Q8NDG6 1382 aaKnown RBP36.86■■■■□ 3.49
ARHGEF35-201ENST00000378115 ARHGAP35Q9NRY4 1499 aa36.75■■■■□ 3.47
ARHGEF35-201ENST00000378115 WDR97A6NE52 1622 aa36.74■■■■□ 3.47
ARHGEF35-201ENST00000378115 APLP2Q06481 763 aa36.64■■■■□ 3.46
ARHGEF35-201ENST00000378115 ABCA5Q8WWZ7 1642 aa36.62■■■■□ 3.45
ARHGEF35-201ENST00000378115 GAPVD1Q14C86 1478 aa36.61■■■■□ 3.45
ARHGEF35-201ENST00000378115 MRC2Q9UBG0 1479 aa36.6■■■■□ 3.45
ARHGEF35-201ENST00000378115 TARBP1Q13395 1621 aaKnown RBP36.6■■■■□ 3.45
ARHGEF35-201ENST00000378115 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.58■■■■□ 3.45
ARHGEF35-201ENST00000378115 P3H3Q8IVL6 736 aa36.57■■■■□ 3.44
ARHGEF35-201ENST00000378115 KANK4Q5T7N3 995 aaPredicted RBP36.56■■■■□ 3.44
ARHGEF35-201ENST00000378115 CUL7Q14999 1698 aa36.51■■■■□ 3.44
ARHGEF35-201ENST00000378115 AQRO60306 1485 aaKnown RBP eCLIP36.49■■■■□ 3.43
ARHGEF35-201ENST00000378115 ERCC6Q03468 1493 aa36.38■■■■□ 3.41
ARHGEF35-201ENST00000378115 ZNF608Q9ULD9 1512 aaPredicted RBP36.37■■■■□ 3.41
ARHGEF35-201ENST00000378115 HNRNPUL2Q1KMD3 747 aaKnown RBP36.37■■■■□ 3.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms