RNA–Protein interactions for RNA: ENST00000417917.1

LINC01770-201, Transcript of long intergenic non-protein coding RNA 1770, humanhuman

TSL 2 BASIC

Gene LINC01770, Length 634 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01770-201ENST00000417917 NISCHQ9Y2I1 1504 aa60.42■■■■■ 7.26
LINC01770-201ENST00000417917 CCDC180Q9P1Z9 1646 aa54.28■■■■■ 6.28
LINC01770-201ENST00000417917 ABCC9O60706 1549 aa54.11■■■■■ 6.25
LINC01770-201ENST00000417917 RB1CC1Q8TDY2 1594 aa51.58■■■■■ 5.85
LINC01770-201ENST00000417917 NACADO15069 1562 aa51.23■■■■■ 5.79
LINC01770-201ENST00000417917 DCAF8L2P0C7V8 631 aa50.85■■■■■ 5.73
LINC01770-201ENST00000417917 DNAJC5BQ9UF47 199 aa50.6■■■■■ 5.69
LINC01770-201ENST00000417917 MYO15BQ96JP2 1530 aa50.55■■■■■ 5.68
LINC01770-201ENST00000417917 UNC13AQ9UPW8 1703 aa50.5■■■■■ 5.68
LINC01770-201ENST00000417917 PABPN1Q86U42 306 aaKnown RBP eCLIP50.32■■■■■ 5.65
LINC01770-201ENST00000417917 ZCCHC6Q5VYS8 1495 aaKnown RBP50.12■■■■■ 5.61
LINC01770-201ENST00000417917 BICRAQ9NZM4 1560 aa50.08■■■■■ 5.61
LINC01770-201ENST00000417917 DCAF1Q9Y4B6 1507 aa49.93■■■■■ 5.58
LINC01770-201ENST00000417917 SCRIBQ14160 1630 aa49.43■■■■■ 5.5
LINC01770-201ENST00000417917 SHROOM4Q9ULL8 1493 aa49.42■■■■■ 5.5
LINC01770-201ENST00000417917 CC2D2AQ9P2K1 1620 aa48.92■■■■■ 5.42
LINC01770-201ENST00000417917 EIF4G1Q04637 1599 aaKnown RBP48.84■■■■■ 5.41
LINC01770-201ENST00000417917 CECR2Q9BXF3 1484 aa48.74■■■■■ 5.39
LINC01770-201ENST00000417917 NCAPD3P42695 1498 aa47.25■■■■■ 5.15
LINC01770-201ENST00000417917 SMARCA4P51532 1647 aa47.16■■■■■ 5.14
LINC01770-201ENST00000417917 ATAD2BQ9ULI0 1458 aa47.13■■■■■ 5.13
LINC01770-201ENST00000417917 SMARCA2P51531 1590 aa47.05■■■■■ 5.12
LINC01770-201ENST00000417917 HMGXB3Q12766 1538 aa46.98■■■■■ 5.11
LINC01770-201ENST00000417917 BAZ1AQ9NRL2 1556 aaPredicted RBP46.92■■■■■ 5.1
LINC01770-201ENST00000417917 ERCC6Q03468 1493 aa46.73■■■■■ 5.07
LINC01770-201ENST00000417917 BAZ1BQ9UIG0 1483 aaKnown RBP46.7■■■■■ 5.07
LINC01770-201ENST00000417917 PEG3Q9GZU2 1588 aa46.7■■■■■ 5.07
LINC01770-201ENST00000417917 CUX2O14529 1486 aa46.63■■■■■ 5.05
LINC01770-201ENST00000417917 MROH2BQ7Z745 1585 aa46.56■■■■■ 5.04
LINC01770-201ENST00000417917 NESP48681 1621 aa46.51■■■■■ 5.04
LINC01770-201ENST00000417917 DNAJC5Q9H3Z4 198 aa46.42■■■■■ 5.02
LINC01770-201ENST00000417917 LAMC3Q9Y6N6 1575 aa46.24■■■■■ 4.99
LINC01770-201ENST00000417917 THOC2Q8NI27 1593 aaKnown RBP46.09■■■■■ 4.97
LINC01770-201ENST00000417917 WIZO95785 1651 aa46.04■■■■■ 4.96
LINC01770-201ENST00000417917 KIF21AQ7Z4S6 1674 aa46.01■■■■■ 4.96
LINC01770-201ENST00000417917 PDS5BQ9NTI5 1447 aa45.91■■■■■ 4.94
LINC01770-201ENST00000417917 CADPSQ9ULU8 1353 aa45.8■■■■■ 4.92
LINC01770-201ENST00000417917 RSF1Q96T23 1441 aaPredicted RBP45.59■■■■■ 4.89
LINC01770-201ENST00000417917 MRC2Q9UBG0 1479 aa45.55■■■■■ 4.88
LINC01770-201ENST00000417917 TOP2AP11388 1531 aaKnown RBP45.47■■■■■ 4.87
LINC01770-201ENST00000417917 WDR62O43379 1518 aa45.45■■■■■ 4.87
LINC01770-201ENST00000417917 CEP164Q9UPV0 1460 aa45.39■■■■■ 4.86
LINC01770-201ENST00000417917 CFTRP13569 1480 aa45.33■■■■■ 4.85
LINC01770-201ENST00000417917 FANCD2Q9BXW9 1451 aa45.33■■■■■ 4.85
LINC01770-201ENST00000417917 PRDM2Q13029 1718 aa45.04■■■■■ 4.8
LINC01770-201ENST00000417917 URB2Q14146 1524 aaKnown RBP44.96■■■■■ 4.79
LINC01770-201ENST00000417917 CCDC88BA6NC98 1476 aa44.89■■■■■ 4.78
LINC01770-201ENST00000417917 TOPBP1Q92547 1522 aa44.49■■■■■ 4.71
LINC01770-201ENST00000417917 IFT140Q96RY7 1462 aa44.46■■■■■ 4.71
LINC01770-201ENST00000417917 TRIM41Q8WV44 630 aa44.43■■■■■ 4.7
LINC01770-201ENST00000417917 OSCARQ8IYS5 282 aa44.42■■■■■ 4.7
LINC01770-201ENST00000417917 ZNF608Q9ULD9 1512 aaPredicted RBP44.38■■■■■ 4.69
LINC01770-201ENST00000417917 ABCC8Q09428 1581 aa44.38■■■■■ 4.69
LINC01770-201ENST00000417917 DNMBPQ6XZF7 1577 aa44.36■■■■■ 4.69
LINC01770-201ENST00000417917 EIF4G3O43432 1585 aaKnown RBP44.21■■■■■ 4.67
LINC01770-201ENST00000417917 TARBP1Q13395 1621 aaKnown RBP44.11■■■■■ 4.65
LINC01770-201ENST00000417917 POLA1P09884 1462 aaPredicted RBP44.03■■■■■ 4.64
LINC01770-201ENST00000417917 RIMBP3CA6NJZ7 1639 aa43.96■■■■■ 4.63
LINC01770-201ENST00000417917 RIMBP3BA6NNM3 1639 aa43.96■■■■■ 4.63
LINC01770-201ENST00000417917 RIMBP3Q9UFD9 1639 aa43.96■■■■■ 4.63
LINC01770-201ENST00000417917 AQRO60306 1485 aaKnown RBP eCLIP43.96■■■■■ 4.63
LINC01770-201ENST00000417917 CHD1O14646 1710 aa43.9■■■■■ 4.62
LINC01770-201ENST00000417917 RAD54L2Q9Y4B4 1467 aa43.84■■■■■ 4.61
LINC01770-201ENST00000417917 ARHGEF11O15085 1522 aa43.8■■■■■ 4.6
LINC01770-201ENST00000417917 SOGA1O94964 1423 aa43.79■■■■■ 4.6
LINC01770-201ENST00000417917 FGD5Q6ZNL6 1462 aa43.77■■■■■ 4.6
LINC01770-201ENST00000417917 CUX1P39880 1505 aa43.76■■■■■ 4.6
LINC01770-201ENST00000417917 WDR97A6NE52 1622 aa43.7■■■■■ 4.59
LINC01770-201ENST00000417917 TDRD9Q8NDG6 1382 aaKnown RBP43.68■■■■■ 4.58
LINC01770-201ENST00000417917 FBLN2P98095 1184 aa43.61■■■■■ 4.57
LINC01770-201ENST00000417917 SUPT5HO00267 1087 aaKnown RBP43.57■■■■■ 4.57
LINC01770-201ENST00000417917 SNAPC4Q5SXM2 1469 aa43.56■■■■■ 4.56
LINC01770-201ENST00000417917 MAGI1Q96QZ7 1491 aaPredicted RBP43.45■■■■■ 4.55
LINC01770-201ENST00000417917 GRIN2BQ13224 1484 aa43.44■■■■■ 4.54
LINC01770-201ENST00000417917 PBRM1Q86U86 1689 aa43.38■■■■■ 4.54
LINC01770-201ENST00000417917 ARAP1Q96P48 1450 aa43.38■■■■■ 4.53
LINC01770-201ENST00000417917 CYB5RLQ6IPT4 315 aa43.37■■■■■ 4.53
LINC01770-201ENST00000417917 CLASP1Q7Z460 1538 aa43.34■■■■■ 4.53
LINC01770-201ENST00000417917 SYNJ1O43426 1573 aa43.33■■■■■ 4.53
LINC01770-201ENST00000417917 CHMP7Q8WUX9 453 aaPredicted RBP43.31■■■■■ 4.52
LINC01770-201ENST00000417917 SYNJ2O15056 1496 aa43.3■■■■■ 4.52
LINC01770-201ENST00000417917 GAPVD1Q14C86 1478 aa43.29■■■■■ 4.52
LINC01770-201ENST00000417917 ABCA10Q8WWZ4 1543 aa43.27■■■■■ 4.52
LINC01770-201ENST00000417917 ABCA5Q8WWZ7 1642 aa43.26■■■■■ 4.52
LINC01770-201ENST00000417917 BIVM-ERCC5R4GMW8 1640 aa43.13■■■■■ 4.49
LINC01770-201ENST00000417917 TOP2BQ02880 1626 aa43.1■■■■■ 4.49
LINC01770-201ENST00000417917 WRNQ14191 1432 aaPredicted RBP eCLIP43.09■■■■■ 4.499e-6■■■■■ 50.1
LINC01770-201ENST00000417917 ADAMTS12P58397 1594 aa42.93■■■■■ 4.46
LINC01770-201ENST00000417917 GRIN2AQ12879 1464 aa42.89■■■■■ 4.46
LINC01770-201ENST00000417917 TRHP20396 242 aaPredicted RBP42.88■■■■■ 4.45
LINC01770-201ENST00000417917 CEP170Q5SW79 1584 aa42.76■■■■■ 4.44
LINC01770-201ENST00000417917 ERICH3Q5RHP9 1530 aa42.76■■■■■ 4.44
LINC01770-201ENST00000417917 FHAD1B1AJZ9 1412 aa42.74■■■■■ 4.43
LINC01770-201ENST00000417917 NUP160Q12769 1436 aa42.73■■■■■ 4.43
LINC01770-201ENST00000417917 ERCC6L2Q5T890 1561 aa42.65■■■■■ 4.42
LINC01770-201ENST00000417917 SHROOM2Q13796 1616 aa42.59■■■■■ 4.41
LINC01770-201ENST00000417917 RUSC2Q8N2Y8 1516 aa42.33■■■■■ 4.37
LINC01770-201ENST00000417917 PRG4Q92954 1404 aaPredicted RBP42.29■■■■■ 4.36
LINC01770-201ENST00000417917 JPH4Q96JJ6 628 aa42.22■■■■■ 4.35
LINC01770-201ENST00000417917 KIF27Q86VH2 1401 aa42.2■■■■■ 4.35
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms