Protein–RNA interactions for Protein: O75525

KHDRBS3, KH domain-containing, RNA-binding, signal transduction-associated protein 3, humanhuman

Known RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDRBS3O75525 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
KHDRBS3O75525 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
KHDRBS3O75525 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
KHDRBS3O75525 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
KHDRBS3O75525 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
KHDRBS3O75525 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
KHDRBS3O75525 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21.5■■□□□ 1.03
KHDRBS3O75525 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
KHDRBS3O75525 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
KHDRBS3O75525 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.49■■□□□ 1.03
KHDRBS3O75525 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
KHDRBS3O75525 AC093323.1-202ENST00000635031 2045 ntBASIC21.49■■□□□ 1.03
KHDRBS3O75525 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
KHDRBS3O75525 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
KHDRBS3O75525 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.48■■□□□ 1.03
KHDRBS3O75525 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
KHDRBS3O75525 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
KHDRBS3O75525 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
KHDRBS3O75525 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
KHDRBS3O75525 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
KHDRBS3O75525 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.48■■□□□ 1.03
KHDRBS3O75525 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
KHDRBS3O75525 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
KHDRBS3O75525 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
KHDRBS3O75525 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.47■■□□□ 1.03
KHDRBS3O75525 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.47■■□□□ 1.03
KHDRBS3O75525 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
KHDRBS3O75525 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
KHDRBS3O75525 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
KHDRBS3O75525 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.46■■□□□ 1.03
KHDRBS3O75525 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.46■■□□□ 1.03
KHDRBS3O75525 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
KHDRBS3O75525 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
KHDRBS3O75525 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
KHDRBS3O75525 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
KHDRBS3O75525 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
KHDRBS3O75525 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
KHDRBS3O75525 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.45■■□□□ 1.02
KHDRBS3O75525 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
KHDRBS3O75525 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.45■■□□□ 1.02
KHDRBS3O75525 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
KHDRBS3O75525 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.45■■□□□ 1.02
KHDRBS3O75525 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
KHDRBS3O75525 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
KHDRBS3O75525 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
KHDRBS3O75525 AC060814.1-201ENST00000554326 538 ntBASIC21.44■■□□□ 1.02
KHDRBS3O75525 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
KHDRBS3O75525 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
KHDRBS3O75525 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
KHDRBS3O75525 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
KHDRBS3O75525 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.43■■□□□ 1.02
KHDRBS3O75525 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
KHDRBS3O75525 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
KHDRBS3O75525 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.42■■□□□ 1.02
KHDRBS3O75525 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.42■■□□□ 1.02
KHDRBS3O75525 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.42■■□□□ 1.02
KHDRBS3O75525 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.42■■□□□ 1.02
KHDRBS3O75525 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
KHDRBS3O75525 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
KHDRBS3O75525 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
KHDRBS3O75525 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
KHDRBS3O75525 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.41■■□□□ 1.02
KHDRBS3O75525 AL157400.5-201ENST00000507624 621 ntBASIC21.41■■□□□ 1.02
KHDRBS3O75525 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
KHDRBS3O75525 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
KHDRBS3O75525 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
KHDRBS3O75525 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
KHDRBS3O75525 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
KHDRBS3O75525 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
KHDRBS3O75525 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.4■■□□□ 1.02
KHDRBS3O75525 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.4■■□□□ 1.02
KHDRBS3O75525 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.4■■□□□ 1.02
KHDRBS3O75525 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.39■■□□□ 1.02
KHDRBS3O75525 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
KHDRBS3O75525 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
KHDRBS3O75525 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
KHDRBS3O75525 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
KHDRBS3O75525 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.39■■□□□ 1.01
KHDRBS3O75525 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
KHDRBS3O75525 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
KHDRBS3O75525 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
KHDRBS3O75525 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
KHDRBS3O75525 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.38■■□□□ 1.01
KHDRBS3O75525 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.38■■□□□ 1.01
KHDRBS3O75525 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
KHDRBS3O75525 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
KHDRBS3O75525 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.38■■□□□ 1.01
KHDRBS3O75525 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
KHDRBS3O75525 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
KHDRBS3O75525 AC025884.2-201ENST00000553429 711 ntBASIC21.37■■□□□ 1.01
KHDRBS3O75525 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.37■■□□□ 1.01
KHDRBS3O75525 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.37■■□□□ 1.01
KHDRBS3O75525 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
KHDRBS3O75525 AC096887.2-201ENST00000623443 1957 ntBASIC21.37■■□□□ 1.01
KHDRBS3O75525 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.37■■□□□ 1.01
KHDRBS3O75525 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.37■■□□□ 1.01
KHDRBS3O75525 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
KHDRBS3O75525 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
KHDRBS3O75525 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
KHDRBS3O75525 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms