RNA–Protein interactions for RNA: ENST00000007264.6

RPUSD1-201, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RPUSD1, Length 2,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-201ENST00000007264 NISCHQ9Y2I1 1504 aa52.87■■■■■ 6.05
RPUSD1-201ENST00000007264 CCDC180Q9P1Z9 1646 aa45.84■■■■■ 4.93
RPUSD1-201ENST00000007264 ZCCHC6Q5VYS8 1495 aaKnown RBP44.5■■■■■ 4.71
RPUSD1-201ENST00000007264 DCAF8L2P0C7V8 631 aa43.74■■■■■ 4.59
RPUSD1-201ENST00000007264 SHROOM4Q9ULL8 1493 aa43.68■■■■■ 4.58
RPUSD1-201ENST00000007264 DCAF1Q9Y4B6 1507 aa43.64■■■■■ 4.58
RPUSD1-201ENST00000007264 ABCC9O60706 1549 aa43.01■■■■■ 4.48
RPUSD1-201ENST00000007264 MYO15BQ96JP2 1530 aa42.91■■■■■ 4.46
RPUSD1-201ENST00000007264 NACADO15069 1562 aa42.58■■■■■ 4.41
RPUSD1-201ENST00000007264 SCRIBQ14160 1630 aa42.35■■■■■ 4.37
RPUSD1-201ENST00000007264 SUPT5HO00267 1087 aaKnown RBP42.3■■■■■ 4.36
RPUSD1-201ENST00000007264 RB1CC1Q8TDY2 1594 aa42.14■■■■■ 4.34
RPUSD1-201ENST00000007264 UNC13AQ9UPW8 1703 aa41.34■■■■■ 4.21
RPUSD1-201ENST00000007264 RSF1Q96T23 1441 aaPredicted RBP41.23■■■■■ 4.19
RPUSD1-201ENST00000007264 CECR2Q9BXF3 1484 aa41.07■■■■■ 4.17
RPUSD1-201ENST00000007264 MROH2BQ7Z745 1585 aa40.9■■■■■ 4.14
RPUSD1-201ENST00000007264 BICRAQ9NZM4 1560 aa40.81■■■■■ 4.12
RPUSD1-201ENST00000007264 BAZ1AQ9NRL2 1556 aaPredicted RBP40.8■■■■■ 4.12
RPUSD1-201ENST00000007264 PABPN1Q86U42 306 aaKnown RBP eCLIP40.7■■■■■ 4.11
RPUSD1-201ENST00000007264 CHIC1Q5VXU3 224 aa40.65■■■■■ 4.1
RPUSD1-201ENST00000007264 WIZO95785 1651 aa40.63■■■■■ 4.09
RPUSD1-201ENST00000007264 SMARCA4P51532 1647 aa40.56■■■■■ 4.08
RPUSD1-201ENST00000007264 TOP2AP11388 1531 aaKnown RBP40.17■■■■■ 4.02
RPUSD1-201ENST00000007264 PEG3Q9GZU2 1588 aa39.96■■■■□ 3.99
RPUSD1-201ENST00000007264 SMARCA2P51531 1590 aa39.81■■■■□ 3.96
RPUSD1-201ENST00000007264 CCDC88BA6NC98 1476 aa39.79■■■■□ 3.96
RPUSD1-201ENST00000007264 ATAD2BQ9ULI0 1458 aa39.74■■■■□ 3.95
RPUSD1-201ENST00000007264 TRIM41Q8WV44 630 aa39.7■■■■□ 3.95
RPUSD1-201ENST00000007264 EIF4G1Q04637 1599 aaKnown RBP39.64■■■■□ 3.94
RPUSD1-201ENST00000007264 BAZ1BQ9UIG0 1483 aaKnown RBP39.61■■■■□ 3.93
RPUSD1-201ENST00000007264 HMGXB3Q12766 1538 aa39.28■■■■□ 3.88
RPUSD1-201ENST00000007264 NCAPD3P42695 1498 aa39.28■■■■□ 3.88
RPUSD1-201ENST00000007264 LOC105371045A0A1W2PR82 267 aa39.18■■■■□ 3.86
RPUSD1-201ENST00000007264 ABCC8Q09428 1581 aa39.18■■■■□ 3.86
RPUSD1-201ENST00000007264 FAM9AQ8IZU1 332 aaPredicted RBP39.05■■■■□ 3.84
RPUSD1-201ENST00000007264 CC2D2AQ9P2K1 1620 aa38.89■■■■□ 3.82
RPUSD1-201ENST00000007264 WRNQ14191 1432 aaPredicted RBP eCLIP38.84■■■■□ 3.81
RPUSD1-201ENST00000007264 SYNJ1O43426 1573 aa38.64■■■■□ 3.78
RPUSD1-201ENST00000007264 CFTRP13569 1480 aa38.58■■■■□ 3.77
RPUSD1-201ENST00000007264 EHMT2Q96KQ7 1210 aa38.56■■■■□ 3.76
RPUSD1-201ENST00000007264 SOGA1O94964 1423 aa38.53■■■■□ 3.76
RPUSD1-201ENST00000007264 EEA1Q15075 1411 aa38.52■■■■□ 3.76
RPUSD1-201ENST00000007264 PRDM2Q13029 1718 aa38.46■■■■□ 3.75
RPUSD1-201ENST00000007264 TOP2BQ02880 1626 aa38.43■■■■□ 3.74
RPUSD1-201ENST00000007264 BIVM-ERCC5R4GMW8 1640 aa38.37■■■■□ 3.73
RPUSD1-201ENST00000007264 CADPSQ9ULU8 1353 aa38.36■■■■□ 3.73
RPUSD1-201ENST00000007264 RUSC2Q8N2Y8 1516 aa38.34■■■■□ 3.73
RPUSD1-201ENST00000007264 CSRNP3Q8WYN3 585 aa38.31■■■■□ 3.72
RPUSD1-201ENST00000007264 CUX1P39880 1505 aa38.2■■■■□ 3.71
RPUSD1-201ENST00000007264 GOLGA3Q08378 1498 aa38.06■■■■□ 3.68
RPUSD1-201ENST00000007264 TNIKQ9UKE5 1360 aa38■■■■□ 3.67
RPUSD1-201ENST00000007264 PCGF6Q9BYE7 350 aa38■■■■□ 3.67
RPUSD1-201ENST00000007264 CEP164Q9UPV0 1460 aa38■■■■□ 3.67
RPUSD1-201ENST00000007264 KIF21BO75037 1637 aa38■■■■□ 3.67
RPUSD1-201ENST00000007264 FANCD2Q9BXW9 1451 aa37.97■■■■□ 3.67
RPUSD1-201ENST00000007264 UBTFP17480 764 aaKnown RBP37.97■■■■□ 3.67
RPUSD1-201ENST00000007264 LAMC3Q9Y6N6 1575 aa37.9■■■■□ 3.66
RPUSD1-201ENST00000007264 NESP48681 1621 aa37.9■■■■□ 3.66
RPUSD1-201ENST00000007264 CEP162Q5TB80 1403 aa37.89■■■■□ 3.66
RPUSD1-201ENST00000007264 KIF27Q86VH2 1401 aa37.81■■■■□ 3.64
RPUSD1-201ENST00000007264 TRIM26Q12899 539 aaPredicted RBP37.81■■■■□ 3.64
RPUSD1-201ENST00000007264 DNAJC5BQ9UF47 199 aa37.74■■■■□ 3.63
RPUSD1-201ENST00000007264 FGD5Q6ZNL6 1462 aa37.73■■■■□ 3.63
RPUSD1-201ENST00000007264 RAPGEF2Q9Y4G8 1499 aa37.72■■■■□ 3.63
RPUSD1-201ENST00000007264 DNMBPQ6XZF7 1577 aa37.7■■■■□ 3.63
RPUSD1-201ENST00000007264 ERICH3Q5RHP9 1530 aa37.64■■■■□ 3.62
RPUSD1-201ENST00000007264 PRXQ9BXM0 1461 aa37.63■■■■□ 3.61
RPUSD1-201ENST00000007264 PDS5BQ9NTI5 1447 aa37.62■■■■□ 3.61
RPUSD1-201ENST00000007264 CUX2O14529 1486 aa37.61■■■■□ 3.61
RPUSD1-201ENST00000007264 TOPBP1Q92547 1522 aa37.6■■■■□ 3.61
RPUSD1-201ENST00000007264 CLIP1P30622 1438 aa37.48■■■■□ 3.59
RPUSD1-201ENST00000007264 POLA1P09884 1462 aaPredicted RBP37.46■■■■□ 3.59
RPUSD1-201ENST00000007264 KIF21AQ7Z4S6 1674 aa37.46■■■■□ 3.59
RPUSD1-201ENST00000007264 URB2Q14146 1524 aaKnown RBP37.44■■■■□ 3.58
RPUSD1-201ENST00000007264 PPARGC1BQ86YN6 1023 aaKnown RBP37.39■■■■□ 3.58
RPUSD1-201ENST00000007264 IGF1RP08069 1367 aa37.38■■■■□ 3.57
RPUSD1-201ENST00000007264 RAD54L2Q9Y4B4 1467 aa37.37■■■■□ 3.57
RPUSD1-201ENST00000007264 ABCA10Q8WWZ4 1543 aa37.36■■■■□ 3.57
RPUSD1-201ENST00000007264 RANGAP1P46060 587 aaPredicted RBP37.27■■■■□ 3.56
RPUSD1-201ENST00000007264 HRCP23327 699 aa37.25■■■■□ 3.55
RPUSD1-201ENST00000007264 CARMIL1Q5VZK9 1371 aa37.24■■■■□ 3.55
RPUSD1-201ENST00000007264 WDR97A6NE52 1622 aa37.2■■■■□ 3.55
RPUSD1-201ENST00000007264 VPS8Q8N3P4 1428 aa37.2■■■■□ 3.55
RPUSD1-201ENST00000007264 MRC2Q9UBG0 1479 aa37.09■■■■□ 3.53
RPUSD1-201ENST00000007264 CUL7Q14999 1698 aa37.08■■■■□ 3.53
RPUSD1-201ENST00000007264 TTBK1Q5TCY1 1321 aaPredicted RBP37.04■■■■□ 3.52
RPUSD1-201ENST00000007264 ABCA5Q8WWZ7 1642 aa37.03■■■■□ 3.52
RPUSD1-201ENST00000007264 ARAP1Q96P48 1450 aa37■■■■□ 3.51
RPUSD1-201ENST00000007264 APLP2Q06481 763 aa36.99■■■■□ 3.51
RPUSD1-201ENST00000007264 TDRD9Q8NDG6 1382 aaKnown RBP36.98■■■■□ 3.51
RPUSD1-201ENST00000007264 TARBP1Q13395 1621 aaKnown RBP36.97■■■■□ 3.51
RPUSD1-201ENST00000007264 GAPVD1Q14C86 1478 aa36.97■■■■□ 3.51
RPUSD1-201ENST00000007264 ARHGAP35Q9NRY4 1499 aa36.9■■■■□ 3.5
RPUSD1-201ENST00000007264 ERCC6Q03468 1493 aa36.86■■■■□ 3.49
RPUSD1-201ENST00000007264 WDR62O43379 1518 aa36.85■■■■□ 3.49
RPUSD1-201ENST00000007264 CTTNBP2Q8WZ74 1663 aa36.78■■■■□ 3.48
RPUSD1-201ENST00000007264 PBRM1Q86U86 1689 aa36.73■■■■□ 3.47
RPUSD1-201ENST00000007264 IFT140Q96RY7 1462 aa36.72■■■■□ 3.47
RPUSD1-201ENST00000007264 AQRO60306 1485 aaKnown RBP eCLIP36.65■■■■□ 3.468e-8■■■■■ 39.5
RPUSD1-201ENST00000007264 THOC2Q8NI27 1593 aaKnown RBP36.63■■■■□ 3.45
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms