RNA–Protein interactions for RNA: ENST00000222330.7

GSK3A-201, Transcript of glycogen synthase kinase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GSK3A, Length 2,188 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSK3A-201ENST00000222330 NISCHQ9Y2I1 1504 aa54.52■■■■■ 6.32
GSK3A-201ENST00000222330 CCDC180Q9P1Z9 1646 aa47.52■■■■■ 5.2
GSK3A-201ENST00000222330 ABCC9O60706 1549 aa45.79■■■■■ 4.92
GSK3A-201ENST00000222330 ZCCHC6Q5VYS8 1495 aaKnown RBP45.75■■■■■ 4.91
GSK3A-201ENST00000222330 DCAF8L2P0C7V8 631 aa45.37■■■■■ 4.85
GSK3A-201ENST00000222330 DCAF1Q9Y4B6 1507 aa44.92■■■■■ 4.78
GSK3A-201ENST00000222330 SHROOM4Q9ULL8 1493 aa44.74■■■■■ 4.75
GSK3A-201ENST00000222330 NACADO15069 1562 aa44.44■■■■■ 4.7
GSK3A-201ENST00000222330 MYO15BQ96JP2 1530 aa44.4■■■■■ 4.7
GSK3A-201ENST00000222330 RB1CC1Q8TDY2 1594 aa44.26■■■■■ 4.68
GSK3A-201ENST00000222330 SCRIBQ14160 1630 aa43.83■■■■■ 4.61
GSK3A-201ENST00000222330 UNC13AQ9UPW8 1703 aa43.49■■■■■ 4.55
GSK3A-201ENST00000222330 PABPN1Q86U42 306 aaKnown RBP eCLIP43.1■■■■■ 4.49
GSK3A-201ENST00000222330 BICRAQ9NZM4 1560 aa43.03■■■■■ 4.48
GSK3A-201ENST00000222330 SUPT5HO00267 1087 aaKnown RBP43.02■■■■■ 4.48
GSK3A-201ENST00000222330 CECR2Q9BXF3 1484 aa42.5■■■■■ 4.39
GSK3A-201ENST00000222330 RSF1Q96T23 1441 aaPredicted RBP42.34■■■■■ 4.37
GSK3A-201ENST00000222330 MROH2BQ7Z745 1585 aa42.2■■■■■ 4.35
GSK3A-201ENST00000222330 BAZ1AQ9NRL2 1556 aaPredicted RBP42.05■■■■■ 4.32
GSK3A-201ENST00000222330 SMARCA4P51532 1647 aa41.91■■■■■ 4.3
GSK3A-201ENST00000222330 WIZO95785 1651 aa41.87■■■■■ 4.29
GSK3A-201ENST00000222330 EIF4G1Q04637 1599 aaKnown RBP41.77■■■■■ 4.28
GSK3A-201ENST00000222330 CC2D2AQ9P2K1 1620 aa41.37■■■■■ 4.21
GSK3A-201ENST00000222330 ATAD2BQ9ULI0 1458 aa41.33■■■■■ 4.21
GSK3A-201ENST00000222330 PEG3Q9GZU2 1588 aa41.3■■■■■ 4.2
GSK3A-201ENST00000222330 TOP2AP11388 1531 aaKnown RBP41.3■■■■■ 4.2
GSK3A-201ENST00000222330 SMARCA2P51531 1590 aa41.22■■■■■ 4.19
GSK3A-201ENST00000222330 DNAJC5BQ9UF47 199 aa41.14■■■■■ 4.18
GSK3A-201ENST00000222330 CHIC1Q5VXU3 224 aa41.06■■■■■ 4.16
GSK3A-201ENST00000222330 BAZ1BQ9UIG0 1483 aaKnown RBP41.05■■■■■ 4.16
GSK3A-201ENST00000222330 NCAPD3P42695 1498 aa41.04■■■■■ 4.16
GSK3A-201ENST00000222330 CCDC88BA6NC98 1476 aa40.99■■■■■ 4.15
GSK3A-201ENST00000222330 HMGXB3Q12766 1538 aa40.9■■■■■ 4.14
GSK3A-201ENST00000222330 TRIM41Q8WV44 630 aa40.35■■■■■ 4.05
GSK3A-201ENST00000222330 ABCC8Q09428 1581 aa40.18■■■■■ 4.02
GSK3A-201ENST00000222330 NESP48681 1621 aa40.01■■■■□ 3.99
GSK3A-201ENST00000222330 CADPSQ9ULU8 1353 aa39.98■■■■□ 3.99
GSK3A-201ENST00000222330 CFTRP13569 1480 aa39.97■■■■□ 3.99
GSK3A-201ENST00000222330 WRNQ14191 1432 aaPredicted RBP eCLIP39.84■■■■□ 3.97
GSK3A-201ENST00000222330 FAM9AQ8IZU1 332 aaPredicted RBP39.77■■■■□ 3.96
GSK3A-201ENST00000222330 LAMC3Q9Y6N6 1575 aa39.76■■■■□ 3.96
GSK3A-201ENST00000222330 PRDM2Q13029 1718 aa39.7■■■■□ 3.95
GSK3A-201ENST00000222330 SYNJ1O43426 1573 aa39.7■■■■□ 3.95
GSK3A-201ENST00000222330 LOC105371045A0A1W2PR82 267 aa39.63■■■■□ 3.94
GSK3A-201ENST00000222330 FANCD2Q9BXW9 1451 aa39.56■■■■□ 3.92
GSK3A-201ENST00000222330 PDS5BQ9NTI5 1447 aa39.48■■■■□ 3.91
GSK3A-201ENST00000222330 KIF21AQ7Z4S6 1674 aa39.47■■■■□ 3.91
GSK3A-201ENST00000222330 TOP2BQ02880 1626 aa39.45■■■■□ 3.91
GSK3A-201ENST00000222330 CUX1P39880 1505 aa39.44■■■■□ 3.9
GSK3A-201ENST00000222330 SOGA1O94964 1423 aa39.43■■■■□ 3.9
GSK3A-201ENST00000222330 BIVM-ERCC5R4GMW8 1640 aa39.39■■■■□ 3.9
GSK3A-201ENST00000222330 CEP164Q9UPV0 1460 aa39.36■■■■□ 3.89
GSK3A-201ENST00000222330 EHMT2Q96KQ7 1210 aa39.33■■■■□ 3.89
GSK3A-201ENST00000222330 RUSC2Q8N2Y8 1516 aa39.33■■■■□ 3.89
GSK3A-201ENST00000222330 ERCC6Q03468 1493 aa39.27■■■■□ 3.88
GSK3A-201ENST00000222330 URB2Q14146 1524 aaKnown RBP39.14■■■■□ 3.86
GSK3A-201ENST00000222330 EEA1Q15075 1411 aa39.1■■■■□ 3.85
GSK3A-201ENST00000222330 CSRNP3Q8WYN3 585 aa39.1■■■■□ 3.85
GSK3A-201ENST00000222330 TOPBP1Q92547 1522 aa39.06■■■■□ 3.84
GSK3A-201ENST00000222330 MRC2Q9UBG0 1479 aa39.04■■■■□ 3.84
GSK3A-201ENST00000222330 DNMBPQ6XZF7 1577 aa39.04■■■■□ 3.84
GSK3A-201ENST00000222330 FGD5Q6ZNL6 1462 aa39.01■■■■□ 3.84
GSK3A-201ENST00000222330 THOC2Q8NI27 1593 aaKnown RBP38.95■■■■□ 3.83
GSK3A-201ENST00000222330 WDR62O43379 1518 aa38.86■■■■□ 3.81
GSK3A-201ENST00000222330 POLA1P09884 1462 aaPredicted RBP38.83■■■■□ 3.81
GSK3A-201ENST00000222330 KIF27Q86VH2 1401 aa38.8■■■■□ 3.8
GSK3A-201ENST00000222330 RAD54L2Q9Y4B4 1467 aa38.79■■■■□ 3.8
GSK3A-201ENST00000222330 CUX2O14529 1486 aa38.78■■■■□ 3.8
GSK3A-201ENST00000222330 UBTFP17480 764 aaKnown RBP38.67■■■■□ 3.78
GSK3A-201ENST00000222330 GOLGA3Q08378 1498 aa38.66■■■■□ 3.78
GSK3A-201ENST00000222330 KIF21BO75037 1637 aa38.64■■■■□ 3.78
GSK3A-201ENST00000222330 ABCA10Q8WWZ4 1543 aa38.6■■■■□ 3.77
GSK3A-201ENST00000222330 RAPGEF2Q9Y4G8 1499 aa38.59■■■■□ 3.77
GSK3A-201ENST00000222330 TNIKQ9UKE5 1360 aa38.54■■■■□ 3.76
GSK3A-201ENST00000222330 TARBP1Q13395 1621 aaKnown RBP38.53■■■■□ 3.76
GSK3A-201ENST00000222330 IGF1RP08069 1367 aa38.53■■■■□ 3.76
GSK3A-201ENST00000222330 PRXQ9BXM0 1461 aa38.53■■■■□ 3.76
GSK3A-201ENST00000222330 TDRD9Q8NDG6 1382 aaKnown RBP38.46■■■■□ 3.75
GSK3A-201ENST00000222330 WDR97A6NE52 1622 aa38.46■■■■□ 3.75
GSK3A-201ENST00000222330 IFT140Q96RY7 1462 aa38.42■■■■□ 3.74
GSK3A-201ENST00000222330 CEP162Q5TB80 1403 aa38.39■■■■□ 3.74
GSK3A-201ENST00000222330 ZNF608Q9ULD9 1512 aaPredicted RBP38.39■■■■□ 3.74
GSK3A-201ENST00000222330 ERICH3Q5RHP9 1530 aa38.38■■■■□ 3.73
GSK3A-201ENST00000222330 AQRO60306 1485 aaKnown RBP eCLIP38.33■■■■□ 3.731e-6■■■□□ 18.3
GSK3A-201ENST00000222330 CARMIL1Q5VZK9 1371 aa38.33■■■■□ 3.73
GSK3A-201ENST00000222330 ABCA5Q8WWZ7 1642 aa38.28■■■■□ 3.72
GSK3A-201ENST00000222330 GAPVD1Q14C86 1478 aa38.27■■■■□ 3.72
GSK3A-201ENST00000222330 RANGAP1P46060 587 aaPredicted RBP38.23■■■■□ 3.71
GSK3A-201ENST00000222330 EIF4G3O43432 1585 aaKnown RBP38.18■■■■□ 3.7
GSK3A-201ENST00000222330 CLIP1P30622 1438 aa38.1■■■■□ 3.69
GSK3A-201ENST00000222330 PBRM1Q86U86 1689 aa38.09■■■■□ 3.69
GSK3A-201ENST00000222330 CUL7Q14999 1698 aa38.08■■■■□ 3.69
GSK3A-201ENST00000222330 GRIN2BQ13224 1484 aa38.01■■■■□ 3.68
GSK3A-201ENST00000222330 SNAPC4Q5SXM2 1469 aa37.91■■■■□ 3.66
GSK3A-201ENST00000222330 PPARGC1BQ86YN6 1023 aaKnown RBP37.87■■■■□ 3.65
GSK3A-201ENST00000222330 ADAMTS12P58397 1594 aa37.81■■■■□ 3.64
GSK3A-201ENST00000222330 FHAD1B1AJZ9 1412 aa37.81■■■■□ 3.64
GSK3A-201ENST00000222330 MAGI1Q96QZ7 1491 aaPredicted RBP37.74■■■■□ 3.63
GSK3A-201ENST00000222330 FBLN2P98095 1184 aa37.73■■■■□ 3.63
GSK3A-201ENST00000222330 ARAP1Q96P48 1450 aa37.73■■■■□ 3.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms