Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC22.88■■□□□ 1.25
PCDH17O14917 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PCDH17O14917 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC22.88■■□□□ 1.25
PCDH17O14917 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC22.87■■□□□ 1.25
PCDH17O14917 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PCDH17O14917 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PCDH17O14917 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
PCDH17O14917 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
PCDH17O14917 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
PCDH17O14917 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PCDH17O14917 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PCDH17O14917 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PCDH17O14917 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
PCDH17O14917 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC22.86■■□□□ 1.25
PCDH17O14917 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PCDH17O14917 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PCDH17O14917 GUK1-208ENST00000366728 842 ntTSL 2 BASIC22.85■■□□□ 1.25
PCDH17O14917 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PCDH17O14917 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
PCDH17O14917 AP004609.3-201ENST00000610705 1884 ntBASIC22.85■■□□□ 1.25
PCDH17O14917 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDH17O14917 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
PCDH17O14917 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC22.84■■□□□ 1.25
PCDH17O14917 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PCDH17O14917 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
PCDH17O14917 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
PCDH17O14917 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC22.83■■□□□ 1.25
PCDH17O14917 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC22.83■■□□□ 1.25
PCDH17O14917 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC22.83■■□□□ 1.25
PCDH17O14917 AC018755.3-202ENST00000596210 929 ntBASIC22.83■■□□□ 1.25
PCDH17O14917 AC074183.2-201ENST00000623112 922 ntBASIC22.83■■□□□ 1.25
PCDH17O14917 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PCDH17O14917 AC092803.2-201ENST00000564287 1899 ntBASIC22.83■■□□□ 1.24
PCDH17O14917 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC22.83■■□□□ 1.24
PCDH17O14917 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PCDH17O14917 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
PCDH17O14917 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDH17O14917 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PCDH17O14917 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDH17O14917 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDH17O14917 DUX4L9-201ENST00000449051 1259 ntBASIC22.81■■□□□ 1.24
PCDH17O14917 MIR6765-201ENST00000614092 87 ntBASIC22.81■■□□□ 1.24
PCDH17O14917 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC22.81■■□□□ 1.24
PCDH17O14917 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
PCDH17O14917 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
PCDH17O14917 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDH17O14917 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
PCDH17O14917 KRT18P10-201ENST00000388836 1287 ntBASIC22.8■■□□□ 1.24
PCDH17O14917 HYI-210ENST00000486909 905 ntTSL 5 BASIC22.8■■□□□ 1.24
PCDH17O14917 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
PCDH17O14917 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC22.8■■□□□ 1.24
PCDH17O14917 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC22.8■■□□□ 1.24
PCDH17O14917 DUSP8P4-201ENST00000399538 1761 ntBASIC22.8■■□□□ 1.24
PCDH17O14917 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC22.79■■□□□ 1.24
PCDH17O14917 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PCDH17O14917 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PCDH17O14917 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC22.79■■□□□ 1.24
PCDH17O14917 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PCDH17O14917 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PCDH17O14917 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PCDH17O14917 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC22.78■■□□□ 1.24
PCDH17O14917 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC22.78■■□□□ 1.24
PCDH17O14917 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC22.78■■□□□ 1.24
PCDH17O14917 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
PCDH17O14917 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC22.77■■□□□ 1.24
PCDH17O14917 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
PCDH17O14917 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
PCDH17O14917 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
PCDH17O14917 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC22.77■■□□□ 1.24
PCDH17O14917 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
PCDH17O14917 AC142472.1-201ENST00000612013 1741 ntBASIC22.77■■□□□ 1.23
PCDH17O14917 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC22.76■■□□□ 1.23
PCDH17O14917 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
PCDH17O14917 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PCDH17O14917 IDNK-203ENST00000405990 629 ntTSL 2 BASIC22.76■■□□□ 1.23
PCDH17O14917 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC22.76■■□□□ 1.23
PCDH17O14917 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC22.76■■□□□ 1.23
PCDH17O14917 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PCDH17O14917 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC22.76■■□□□ 1.23
PCDH17O14917 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC22.76■■□□□ 1.23
PCDH17O14917 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDH17O14917 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC22.75■■□□□ 1.23
PCDH17O14917 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC22.75■■□□□ 1.23
PCDH17O14917 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDH17O14917 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDH17O14917 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDH17O14917 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
PCDH17O14917 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC22.74■■□□□ 1.23
PCDH17O14917 DUX4L18-201ENST00000553347 1267 ntBASIC22.74■■□□□ 1.23
PCDH17O14917 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC22.74■■□□□ 1.23
PCDH17O14917 PKM-204ENST00000449901 2526 ntTSL 2 BASIC22.74■■□□□ 1.23
PCDH17O14917 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
PCDH17O14917 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
PCDH17O14917 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC22.74■■□□□ 1.23
PCDH17O14917 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PCDH17O14917 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PCDH17O14917 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC22.73■■□□□ 1.23
PCDH17O14917 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
PCDH17O14917 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
PCDH17O14917 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms