Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC32.16■■■□□ 2.74
PCDH17O14917 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
PCDH17O14917 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC31.39■■■□□ 2.62
PCDH17O14917 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
PCDH17O14917 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC31.12■■■□□ 2.57
PCDH17O14917 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
PCDH17O14917 AL356512.1-201ENST00000607453 1739 ntBASIC31.01■■■□□ 2.56
PCDH17O14917 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC30.78■■■□□ 2.52
PCDH17O14917 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC30.61■■■□□ 2.49
PCDH17O14917 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC30.49■■■□□ 2.47
PCDH17O14917 HES6-203ENST00000409160 1600 ntTSL 2 BASIC30.4■■■□□ 2.46
PCDH17O14917 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC30.23■■■□□ 2.43
PCDH17O14917 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC30.09■■■□□ 2.41
PCDH17O14917 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC30.07■■■□□ 2.4
PCDH17O14917 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC29.99■■■□□ 2.39
PCDH17O14917 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC29.97■■■□□ 2.39
PCDH17O14917 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC29.89■■■□□ 2.38
PCDH17O14917 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC29.85■■■□□ 2.37
PCDH17O14917 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC29.85■■■□□ 2.37
PCDH17O14917 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC29.69■■■□□ 2.34
PCDH17O14917 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
PCDH17O14917 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
PCDH17O14917 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC29.48■■■□□ 2.31
PCDH17O14917 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC29.41■■■□□ 2.3
PCDH17O14917 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC29.33■■■□□ 2.29
PCDH17O14917 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC29.33■■■□□ 2.29
PCDH17O14917 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC29.32■■■□□ 2.28
PCDH17O14917 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
PCDH17O14917 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
PCDH17O14917 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
PCDH17O14917 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC29.22■■■□□ 2.27
PCDH17O14917 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
PCDH17O14917 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
PCDH17O14917 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
PCDH17O14917 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC28.99■■■□□ 2.23
PCDH17O14917 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
PCDH17O14917 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC28.97■■■□□ 2.23
PCDH17O14917 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC28.97■■■□□ 2.23
PCDH17O14917 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC28.97■■■□□ 2.23
PCDH17O14917 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC28.91■■■□□ 2.22
PCDH17O14917 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC28.91■■■□□ 2.22
PCDH17O14917 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
PCDH17O14917 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
PCDH17O14917 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
PCDH17O14917 INO80B-203ENST00000409917 796 ntTSL 2 BASIC28.73■■■□□ 2.19
PCDH17O14917 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC28.7■■■□□ 2.18
PCDH17O14917 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC28.67■■■□□ 2.18
PCDH17O14917 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
PCDH17O14917 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC28.61■■■□□ 2.17
PCDH17O14917 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
PCDH17O14917 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
PCDH17O14917 AC015813.7-201ENST00000623294 581 ntBASIC28.49■■■□□ 2.15
PCDH17O14917 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC28.42■■■□□ 2.14
PCDH17O14917 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC28.4■■■□□ 2.14
PCDH17O14917 AC006077.2-201ENST00000623591 457 ntBASIC28.39■■■□□ 2.14
PCDH17O14917 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC28.37■■■□□ 2.13
PCDH17O14917 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
PCDH17O14917 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC28.35■■■□□ 2.13
PCDH17O14917 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
PCDH17O14917 ZNRF2P1-201ENST00000441407 443 ntBASIC28.25■■■□□ 2.11
PCDH17O14917 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC28.18■■■□□ 2.1
PCDH17O14917 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC28.17■■■□□ 2.1
PCDH17O14917 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
PCDH17O14917 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC28.12■■■□□ 2.09
PCDH17O14917 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
PCDH17O14917 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC28.06■■■□□ 2.08
PCDH17O14917 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC28.04■■■□□ 2.08
PCDH17O14917 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
PCDH17O14917 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC27.97■■■□□ 2.07
PCDH17O14917 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC27.96■■■□□ 2.07
PCDH17O14917 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC27.95■■■□□ 2.06
PCDH17O14917 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
PCDH17O14917 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
PCDH17O14917 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
PCDH17O14917 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
PCDH17O14917 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
PCDH17O14917 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC27.72■■■□□ 2.03
PCDH17O14917 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
PCDH17O14917 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC27.7■■■□□ 2.03
PCDH17O14917 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC27.67■■■□□ 2.02
PCDH17O14917 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
PCDH17O14917 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
PCDH17O14917 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
PCDH17O14917 ILK-212ENST00000532063 1617 ntTSL 2 BASIC27.63■■■□□ 2.01
PCDH17O14917 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
PCDH17O14917 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
PCDH17O14917 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC27.58■■■□□ 2.01
PCDH17O14917 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC27.55■■■□□ 2
PCDH17O14917 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
PCDH17O14917 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC27.53■■■□□ 2
PCDH17O14917 AP002365.1-201ENST00000603448 772 ntBASIC27.53■■■□□ 2
PCDH17O14917 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
PCDH17O14917 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC27.49■■□□□ 1.99
PCDH17O14917 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC27.48■■□□□ 1.99
PCDH17O14917 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
PCDH17O14917 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC27.45■■□□□ 1.99
PCDH17O14917 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC27.45■■□□□ 1.98
PCDH17O14917 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
PCDH17O14917 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC27.43■■□□□ 1.98
PCDH17O14917 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Retrieved 100 of 98,524 protein–RNA pairs in 8.9 ms