RNA–Protein interactions for RNA: ENST00000622125.4

MSRB1-206, Transcript of methionine sulfoxide reductase B1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene MSRB1, Length 1,363 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB1-206ENST00000622125 NISCHQ9Y2I1 1504 aa58.86■■■■■ 7.01
MSRB1-206ENST00000622125 CCDC180Q9P1Z9 1646 aa52.2■■■■■ 5.95
MSRB1-206ENST00000622125 ABCC9O60706 1549 aa51.18■■■■■ 5.78
MSRB1-206ENST00000622125 DCAF8L2P0C7V8 631 aa49.34■■■■■ 5.49
MSRB1-206ENST00000622125 RB1CC1Q8TDY2 1594 aa49.15■■■■■ 5.46
MSRB1-206ENST00000622125 NACADO15069 1562 aa49.07■■■■■ 5.45
MSRB1-206ENST00000622125 ZCCHC6Q5VYS8 1495 aaKnown RBP49.05■■■■■ 5.44
MSRB1-206ENST00000622125 MYO15BQ96JP2 1530 aa48.72■■■■■ 5.39
MSRB1-206ENST00000622125 DCAF1Q9Y4B6 1507 aa48.59■■■■■ 5.37
MSRB1-206ENST00000622125 UNC13AQ9UPW8 1703 aa48.04■■■■■ 5.28
MSRB1-206ENST00000622125 PABPN1Q86U42 306 aaKnown RBP eCLIP47.89■■■■■ 5.26
MSRB1-206ENST00000622125 SCRIBQ14160 1630 aa47.83■■■■■ 5.25
MSRB1-206ENST00000622125 BICRAQ9NZM4 1560 aa47.67■■■■■ 5.22
MSRB1-206ENST00000622125 SHROOM4Q9ULL8 1493 aa47.04■■■■■ 5.12
MSRB1-206ENST00000622125 DNAJC5BQ9UF47 199 aa46.86■■■■■ 5.09
MSRB1-206ENST00000622125 EIF4G1Q04637 1599 aaKnown RBP46.42■■■■■ 5.02
MSRB1-206ENST00000622125 CC2D2AQ9P2K1 1620 aa46.23■■■■■ 4.99
MSRB1-206ENST00000622125 CECR2Q9BXF3 1484 aa45.93■■■■■ 4.94
MSRB1-206ENST00000622125 SMARCA4P51532 1647 aa45.67■■■■■ 4.9
MSRB1-206ENST00000622125 BAZ1AQ9NRL2 1556 aaPredicted RBP45.6■■■■■ 4.89
MSRB1-206ENST00000622125 MROH2BQ7Z745 1585 aa45.42■■■■■ 4.86
MSRB1-206ENST00000622125 ATAD2BQ9ULI0 1458 aa45.39■■■■■ 4.86
MSRB1-206ENST00000622125 SMARCA2P51531 1590 aa45.3■■■■■ 4.84
MSRB1-206ENST00000622125 NCAPD3P42695 1498 aa45.29■■■■■ 4.84
MSRB1-206ENST00000622125 PEG3Q9GZU2 1588 aa45.12■■■■■ 4.81
MSRB1-206ENST00000622125 HMGXB3Q12766 1538 aa45.08■■■■■ 4.81
MSRB1-206ENST00000622125 BAZ1BQ9UIG0 1483 aaKnown RBP45.05■■■■■ 4.8
MSRB1-206ENST00000622125 WIZO95785 1651 aa44.95■■■■■ 4.79
MSRB1-206ENST00000622125 RSF1Q96T23 1441 aaPredicted RBP44.92■■■■■ 4.78
MSRB1-206ENST00000622125 TOP2AP11388 1531 aaKnown RBP44.43■■■■■ 4.7
MSRB1-206ENST00000622125 NESP48681 1621 aa44.32■■■■■ 4.69
MSRB1-206ENST00000622125 ERCC6Q03468 1493 aa44.09■■■■■ 4.65
MSRB1-206ENST00000622125 LAMC3Q9Y6N6 1575 aa44.08■■■■■ 4.65
MSRB1-206ENST00000622125 SUPT5HO00267 1087 aaKnown RBP44.04■■■■■ 4.64
MSRB1-206ENST00000622125 CADPSQ9ULU8 1353 aa44.02■■■■■ 4.64
MSRB1-206ENST00000622125 CCDC88BA6NC98 1476 aa43.94■■■■■ 4.62
MSRB1-206ENST00000622125 PDS5BQ9NTI5 1447 aa43.81■■■■■ 4.6
MSRB1-206ENST00000622125 CFTRP13569 1480 aa43.76■■■■■ 4.6
MSRB1-206ENST00000622125 KIF21AQ7Z4S6 1674 aa43.75■■■■■ 4.59
MSRB1-206ENST00000622125 FANCD2Q9BXW9 1451 aa43.56■■■■■ 4.56
MSRB1-206ENST00000622125 THOC2Q8NI27 1593 aaKnown RBP43.55■■■■■ 4.56
MSRB1-206ENST00000622125 CEP164Q9UPV0 1460 aa43.48■■■■■ 4.55
MSRB1-206ENST00000622125 CUX2O14529 1486 aa43.46■■■■■ 4.55
MSRB1-206ENST00000622125 PRDM2Q13029 1718 aa43.4■■■■■ 4.54
MSRB1-206ENST00000622125 MRC2Q9UBG0 1479 aa43.4■■■■■ 4.54
MSRB1-206ENST00000622125 WDR62O43379 1518 aa43.21■■■■■ 4.51
MSRB1-206ENST00000622125 URB2Q14146 1524 aaKnown RBP43.13■■■■■ 4.49
MSRB1-206ENST00000622125 TOPBP1Q92547 1522 aa42.87■■■■■ 4.45
MSRB1-206ENST00000622125 DNMBPQ6XZF7 1577 aa42.8■■■■■ 4.44
MSRB1-206ENST00000622125 ABCC8Q09428 1581 aa42.76■■■■■ 4.44
MSRB1-206ENST00000622125 CUX1P39880 1505 aa42.6■■■■■ 4.41
MSRB1-206ENST00000622125 IFT140Q96RY7 1462 aa42.54■■■■■ 4.4
MSRB1-206ENST00000622125 POLA1P09884 1462 aaPredicted RBP42.52■■■■■ 4.4
MSRB1-206ENST00000622125 FGD5Q6ZNL6 1462 aa42.46■■■■■ 4.39
MSRB1-206ENST00000622125 ZNF608Q9ULD9 1512 aaPredicted RBP42.42■■■■■ 4.38
MSRB1-206ENST00000622125 RAD54L2Q9Y4B4 1467 aa42.4■■■■■ 4.38
MSRB1-206ENST00000622125 WRNQ14191 1432 aaPredicted RBP eCLIP42.36■■■■■ 4.37
MSRB1-206ENST00000622125 TARBP1Q13395 1621 aaKnown RBP42.35■■■■■ 4.37
MSRB1-206ENST00000622125 SOGA1O94964 1423 aa42.35■■■■■ 4.37
MSRB1-206ENST00000622125 SYNJ1O43426 1573 aa42.28■■■■■ 4.36
MSRB1-206ENST00000622125 EIF4G3O43432 1585 aaKnown RBP42.22■■■■■ 4.35
MSRB1-206ENST00000622125 TOP2BQ02880 1626 aa42.21■■■■■ 4.35
MSRB1-206ENST00000622125 AQRO60306 1485 aaKnown RBP eCLIP42.2■■■■■ 4.354e-8■■■■■ 64.5
MSRB1-206ENST00000622125 BIVM-ERCC5R4GMW8 1640 aa42.19■■■■■ 4.34
MSRB1-206ENST00000622125 TDRD9Q8NDG6 1382 aaKnown RBP42.16■■■■■ 4.34
MSRB1-206ENST00000622125 DNAJC5Q9H3Z4 198 aa42.03■■■■■ 4.32
MSRB1-206ENST00000622125 WDR97A6NE52 1622 aa42.03■■■■■ 4.32
MSRB1-206ENST00000622125 ABCA10Q8WWZ4 1543 aa41.98■■■■■ 4.31
MSRB1-206ENST00000622125 GAPVD1Q14C86 1478 aa41.86■■■■■ 4.29
MSRB1-206ENST00000622125 GRIN2BQ13224 1484 aa41.82■■■■■ 4.28
MSRB1-206ENST00000622125 ABCA5Q8WWZ7 1642 aa41.81■■■■■ 4.28
MSRB1-206ENST00000622125 SNAPC4Q5SXM2 1469 aa41.81■■■■■ 4.28
MSRB1-206ENST00000622125 PBRM1Q86U86 1689 aa41.76■■■■■ 4.28
MSRB1-206ENST00000622125 FBLN2P98095 1184 aa41.76■■■■■ 4.27
MSRB1-206ENST00000622125 OSCARQ8IYS5 282 aa41.74■■■■■ 4.27
MSRB1-206ENST00000622125 CHD1O14646 1710 aa41.67■■■■■ 4.26
MSRB1-206ENST00000622125 MAGI1Q96QZ7 1491 aaPredicted RBP41.66■■■■■ 4.26
MSRB1-206ENST00000622125 CHMP7Q8WUX9 453 aaPredicted RBP41.57■■■■■ 4.25
MSRB1-206ENST00000622125 SYNJ2O15056 1496 aa41.53■■■■■ 4.24
MSRB1-206ENST00000622125 TRIM41Q8WV44 630 aa41.5■■■■■ 4.23
MSRB1-206ENST00000622125 ERICH3Q5RHP9 1530 aa41.46■■■■■ 4.23
MSRB1-206ENST00000622125 KIF27Q86VH2 1401 aa41.45■■■■■ 4.23
MSRB1-206ENST00000622125 ADAMTS12P58397 1594 aa41.44■■■■■ 4.22
MSRB1-206ENST00000622125 FHAD1B1AJZ9 1412 aa41.35■■■■■ 4.21
MSRB1-206ENST00000622125 GRIN2AQ12879 1464 aa41.29■■■■■ 4.2
MSRB1-206ENST00000622125 IGF1RP08069 1367 aa41.26■■■■■ 4.2
MSRB1-206ENST00000622125 RUSC2Q8N2Y8 1516 aa41.21■■■■■ 4.19
MSRB1-206ENST00000622125 CLASP1Q7Z460 1538 aa41.18■■■■■ 4.18
MSRB1-206ENST00000622125 CUL7Q14999 1698 aa41.11■■■■■ 4.17
MSRB1-206ENST00000622125 CEP170Q5SW79 1584 aa41.11■■■■■ 4.17
MSRB1-206ENST00000622125 ARHGEF11O15085 1522 aa41.09■■■■■ 4.17
MSRB1-206ENST00000622125 RIMBP3CA6NJZ7 1639 aa41.08■■■■■ 4.17
MSRB1-206ENST00000622125 RIMBP3BA6NNM3 1639 aa41.08■■■■■ 4.17
MSRB1-206ENST00000622125 RIMBP3Q9UFD9 1639 aa41.08■■■■■ 4.17
MSRB1-206ENST00000622125 NUP160Q12769 1436 aa41.07■■■■■ 4.16
MSRB1-206ENST00000622125 CHIC1Q5VXU3 224 aa41.06■■■■■ 4.16
MSRB1-206ENST00000622125 CARMIL1Q5VZK9 1371 aa41.05■■■■■ 4.16
MSRB1-206ENST00000622125 RAPGEF2Q9Y4G8 1499 aa40.8■■■■■ 4.12
MSRB1-206ENST00000622125 ARAP1Q96P48 1450 aa40.78■■■■■ 4.12
MSRB1-206ENST00000622125 FAM9AQ8IZU1 332 aaPredicted RBP40.76■■■■■ 4.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms