Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 RN7SL606P-201ENST00000472779 293 ntBASIC17.79■□□□□ 0.44
CCDC188H7C350 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.79■□□□□ 0.44
CCDC188H7C350 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.79■□□□□ 0.44
CCDC188H7C350 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
CCDC188H7C350 AC073912.3-201ENST00000624414 853 ntBASIC17.79■□□□□ 0.44
CCDC188H7C350 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.79■□□□□ 0.44
CCDC188H7C350 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC188H7C350 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC188H7C350 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC188H7C350 AL365203.3-201ENST00000609742 2057 ntBASIC17.79■□□□□ 0.44
CCDC188H7C350 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
CCDC188H7C350 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC188H7C350 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC188H7C350 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC188H7C350 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC188H7C350 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
CCDC188H7C350 ME2P1-201ENST00000426028 1970 ntBASIC17.79■□□□□ 0.44
CCDC188H7C350 AC006538.1-201ENST00000567905 1585 ntBASIC17.79■□□□□ 0.44
CCDC188H7C350 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC188H7C350 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CCDC188H7C350 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC188H7C350 ALOX12P2-203ENST00000570921 1945 ntBASIC17.78■□□□□ 0.44
CCDC188H7C350 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CCDC188H7C350 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC188H7C350 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC188H7C350 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC188H7C350 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC188H7C350 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC188H7C350 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC188H7C350 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC188H7C350 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.78■□□□□ 0.44
CCDC188H7C350 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC188H7C350 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC188H7C350 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.78■□□□□ 0.44
CCDC188H7C350 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC188H7C350 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC188H7C350 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC188H7C350 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.78■□□□□ 0.44
CCDC188H7C350 AC005336.2-201ENST00000593183 939 ntBASIC17.78■□□□□ 0.44
CCDC188H7C350 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC188H7C350 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC188H7C350 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC188H7C350 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC188H7C350 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC188H7C350 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC188H7C350 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC188H7C350 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC188H7C350 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC188H7C350 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC188H7C350 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC188H7C350 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
CCDC188H7C350 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC188H7C350 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC188H7C350 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC188H7C350 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC188H7C350 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC188H7C350 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC188H7C350 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CCDC188H7C350 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC188H7C350 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC188H7C350 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC188H7C350 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC188H7C350 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC188H7C350 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC188H7C350 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC188H7C350 AC112907.2-201ENST00000448639 330 ntBASIC17.77■□□□□ 0.44
CCDC188H7C350 KRT18P38-201ENST00000449496 1282 ntBASIC17.77■□□□□ 0.44
CCDC188H7C350 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.77■□□□□ 0.44
CCDC188H7C350 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC188H7C350 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC188H7C350 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.44
CCDC188H7C350 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CCDC188H7C350 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC188H7C350 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC188H7C350 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.77■□□□□ 0.43
CCDC188H7C350 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC188H7C350 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.77■□□□□ 0.43
CCDC188H7C350 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.43
CCDC188H7C350 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC188H7C350 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.77■□□□□ 0.43
CCDC188H7C350 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC188H7C350 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.77■□□□□ 0.43
CCDC188H7C350 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
CCDC188H7C350 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC188H7C350 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC188H7C350 AC105917.1-201ENST00000506637 2539 ntBASIC17.76■□□□□ 0.43
CCDC188H7C350 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC188H7C350 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CCDC188H7C350 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC188H7C350 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC188H7C350 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CCDC188H7C350 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
CCDC188H7C350 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC188H7C350 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC188H7C350 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC188H7C350 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.76■□□□□ 0.43
CCDC188H7C350 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC188H7C350 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC188H7C350 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC188H7C350 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms