Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC34.95■■■■□ 3.18
CCDC188H7C350 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC34.86■■■■□ 3.17
CCDC188H7C350 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC34.65■■■■□ 3.14
CCDC188H7C350 HES6-203ENST00000409160 1600 ntTSL 2 BASIC34.37■■■■□ 3.09
CCDC188H7C350 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC34.3■■■■□ 3.08
CCDC188H7C350 AL356512.1-201ENST00000607453 1739 ntBASIC34.12■■■■□ 3.05
CCDC188H7C350 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC33.98■■■■□ 3.03
CCDC188H7C350 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC33.79■■■■□ 3
CCDC188H7C350 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC33.79■■■■□ 3
CCDC188H7C350 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC33.57■■■□□ 2.96
CCDC188H7C350 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC33.45■■■□□ 2.94
CCDC188H7C350 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC33.43■■■□□ 2.94
CCDC188H7C350 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC33.36■■■□□ 2.93
CCDC188H7C350 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC33.26■■■□□ 2.91
CCDC188H7C350 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC33.22■■■□□ 2.91
CCDC188H7C350 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC33.21■■■□□ 2.91
CCDC188H7C350 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC33.1■■■□□ 2.89
CCDC188H7C350 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC33.07■■■□□ 2.88
CCDC188H7C350 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC32.96■■■□□ 2.87
CCDC188H7C350 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
CCDC188H7C350 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
CCDC188H7C350 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC32.75■■■□□ 2.83
CCDC188H7C350 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC32.75■■■□□ 2.83
CCDC188H7C350 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
CCDC188H7C350 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC32.66■■■□□ 2.82
CCDC188H7C350 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
CCDC188H7C350 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC32.35■■■□□ 2.77
CCDC188H7C350 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC32.29■■■□□ 2.76
CCDC188H7C350 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC32.19■■■□□ 2.74
CCDC188H7C350 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC31.99■■■□□ 2.71
CCDC188H7C350 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC31.95■■■□□ 2.71
CCDC188H7C350 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC31.87■■■□□ 2.69
CCDC188H7C350 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC31.83■■■□□ 2.69
CCDC188H7C350 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC31.81■■■□□ 2.68
CCDC188H7C350 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
CCDC188H7C350 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC31.78■■■□□ 2.68
CCDC188H7C350 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
CCDC188H7C350 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
CCDC188H7C350 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
CCDC188H7C350 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
CCDC188H7C350 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
CCDC188H7C350 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC31.47■■■□□ 2.63
CCDC188H7C350 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC31.45■■■□□ 2.62
CCDC188H7C350 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
CCDC188H7C350 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
CCDC188H7C350 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC31.31■■■□□ 2.6
CCDC188H7C350 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC31.3■■■□□ 2.6
CCDC188H7C350 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC31.29■■■□□ 2.6
CCDC188H7C350 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC31.27■■■□□ 2.6
CCDC188H7C350 ILK-212ENST00000532063 1617 ntTSL 2 BASIC31.22■■■□□ 2.59
CCDC188H7C350 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
CCDC188H7C350 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC31.18■■■□□ 2.58
CCDC188H7C350 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC31.17■■■□□ 2.58
CCDC188H7C350 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC31.05■■■□□ 2.56
CCDC188H7C350 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC31.02■■■□□ 2.56
CCDC188H7C350 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
CCDC188H7C350 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
CCDC188H7C350 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
CCDC188H7C350 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC30.96■■■□□ 2.55
CCDC188H7C350 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
CCDC188H7C350 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC30.91■■■□□ 2.54
CCDC188H7C350 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC30.86■■■□□ 2.53
CCDC188H7C350 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC30.85■■■□□ 2.53
CCDC188H7C350 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
CCDC188H7C350 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
CCDC188H7C350 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
CCDC188H7C350 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC30.74■■■□□ 2.51
CCDC188H7C350 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC30.73■■■□□ 2.51
CCDC188H7C350 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
CCDC188H7C350 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC30.62■■■□□ 2.49
CCDC188H7C350 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC30.61■■■□□ 2.49
CCDC188H7C350 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
CCDC188H7C350 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC30.54■■■□□ 2.48
CCDC188H7C350 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC30.54■■■□□ 2.48
CCDC188H7C350 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
CCDC188H7C350 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC30.52■■■□□ 2.48
CCDC188H7C350 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
CCDC188H7C350 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC30.49■■■□□ 2.47
CCDC188H7C350 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC30.48■■■□□ 2.47
CCDC188H7C350 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC30.47■■■□□ 2.47
CCDC188H7C350 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
CCDC188H7C350 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
CCDC188H7C350 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
CCDC188H7C350 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
CCDC188H7C350 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC30.36■■■□□ 2.45
CCDC188H7C350 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC30.35■■■□□ 2.45
CCDC188H7C350 AC145285.7-201ENST00000614819 1539 ntBASIC30.31■■■□□ 2.44
CCDC188H7C350 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC30.31■■■□□ 2.44
CCDC188H7C350 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
CCDC188H7C350 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC30.27■■■□□ 2.44
CCDC188H7C350 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC30.25■■■□□ 2.43
CCDC188H7C350 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
CCDC188H7C350 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
CCDC188H7C350 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
CCDC188H7C350 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC30.19■■■□□ 2.42
CCDC188H7C350 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC30.18■■■□□ 2.42
CCDC188H7C350 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
CCDC188H7C350 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC30.16■■■□□ 2.42
CCDC188H7C350 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC30.16■■■□□ 2.42
CCDC188H7C350 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms