RNA–Protein interactions for RNA: ENST00000256151.7

CCDC59-201, Transcript of coiled-coil domain containing 59, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC59, Length 1,983 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-201ENST00000256151 NISCHQ9Y2I1 1504 aa33.38■■■□□ 2.93
CCDC59-201ENST00000256151 CCDC180Q9P1Z9 1646 aa29.07■■■□□ 2.24
CCDC59-201ENST00000256151 ZCCHC6Q5VYS8 1495 aaKnown RBP28.01■■■□□ 2.08
CCDC59-201ENST00000256151 DCAF8L2P0C7V8 631 aa27.8■■■□□ 2.04
CCDC59-201ENST00000256151 ABCC9O60706 1549 aa27.77■■■□□ 2.04
CCDC59-201ENST00000256151 SHROOM4Q9ULL8 1493 aa27.6■■■□□ 2.01
CCDC59-201ENST00000256151 DCAF1Q9Y4B6 1507 aa27.51■■□□□ 1.99
CCDC59-201ENST00000256151 SUPT5HO00267 1087 aaKnown RBP27.32■■□□□ 1.96
CCDC59-201ENST00000256151 MYO15BQ96JP2 1530 aa27.19■■□□□ 1.94
CCDC59-201ENST00000256151 NACADO15069 1562 aa27.12■■□□□ 1.93
CCDC59-201ENST00000256151 CHIC1Q5VXU3 224 aa26.99■■□□□ 1.91
CCDC59-201ENST00000256151 HRCP23327 699 aa26.95■■□□□ 1.91
CCDC59-201ENST00000256151 RB1CC1Q8TDY2 1594 aa26.95■■□□□ 1.9
CCDC59-201ENST00000256151 SCRIBQ14160 1630 aa26.88■■□□□ 1.89
CCDC59-201ENST00000256151 UNC13AQ9UPW8 1703 aa26.45■■□□□ 1.82
CCDC59-201ENST00000256151 PCGF6Q9BYE7 350 aa26.43■■□□□ 1.82
CCDC59-201ENST00000256151 PABPN1Q86U42 306 aaKnown RBP eCLIP26.22■■□□□ 1.79
CCDC59-201ENST00000256151 BICRAQ9NZM4 1560 aa26.19■■□□□ 1.78
CCDC59-201ENST00000256151 TRIM26Q12899 539 aaPredicted RBP26.06■■□□□ 1.76
CCDC59-201ENST00000256151 CECR2Q9BXF3 1484 aa26.04■■□□□ 1.76
CCDC59-201ENST00000256151 LOC105371045A0A1W2PR82 267 aa26.02■■□□□ 1.76
CCDC59-201ENST00000256151 PPARGC1BQ86YN6 1023 aaKnown RBP26.01■■□□□ 1.75
CCDC59-201ENST00000256151 RSF1Q96T23 1441 aaPredicted RBP25.89■■□□□ 1.74
CCDC59-201ENST00000256151 ZEB1P37275 1124 aaPredicted RBP25.85■■□□□ 1.73
CCDC59-201ENST00000256151 MROH2BQ7Z745 1585 aa25.84■■□□□ 1.73
CCDC59-201ENST00000256151 BAZ1AQ9NRL2 1556 aaPredicted RBP25.76■■□□□ 1.72
CCDC59-201ENST00000256151 SMARCA4P51532 1647 aa25.69■■□□□ 1.7
CCDC59-201ENST00000256151 WIZO95785 1651 aa25.64■■□□□ 1.69
CCDC59-201ENST00000256151 TRIM41Q8WV44 630 aa25.58■■□□□ 1.69
CCDC59-201ENST00000256151 EIF4G1Q04637 1599 aaKnown RBP25.41■■□□□ 1.66
CCDC59-201ENST00000256151 PELP1Q8IZL8 1130 aaKnown RBP25.36■■□□□ 1.65
CCDC59-201ENST00000256151 PEG3Q9GZU2 1588 aa25.32■■□□□ 1.64
CCDC59-201ENST00000256151 ATAD2BQ9ULI0 1458 aa25.31■■□□□ 1.64
CCDC59-201ENST00000256151 TOP2AP11388 1531 aaKnown RBP25.29■■□□□ 1.64
CCDC59-201ENST00000256151 SMARCA2P51531 1590 aa25.24■■□□□ 1.63
CCDC59-201ENST00000256151 BAZ1BQ9UIG0 1483 aaKnown RBP25.17■■□□□ 1.62
CCDC59-201ENST00000256151 FAM9AQ8IZU1 332 aaPredicted RBP25.15■■□□□ 1.62
CCDC59-201ENST00000256151 CCDC88BA6NC98 1476 aa25.09■■□□□ 1.61
CCDC59-201ENST00000256151 CC2D2AQ9P2K1 1620 aa25.08■■□□□ 1.61
CCDC59-201ENST00000256151 NCAPD3P42695 1498 aa25.07■■□□□ 1.6
CCDC59-201ENST00000256151 HMGXB3Q12766 1538 aa25■■□□□ 1.59
CCDC59-201ENST00000256151 SCAF1Q9H7N4 1312 aaKnown RBP24.98■■□□□ 1.59
CCDC59-201ENST00000256151 WRNQ14191 1432 aaPredicted RBP eCLIP24.91■■□□□ 1.58
CCDC59-201ENST00000256151 CCER1Q8TC90 406 aaPredicted RBP24.75■■□□□ 1.55
CCDC59-201ENST00000256151 EHMT2Q96KQ7 1210 aa24.73■■□□□ 1.55
CCDC59-201ENST00000256151 ACIN1Q9UKV3 1341 aaKnown RBP24.72■■□□□ 1.55
CCDC59-201ENST00000256151 EEA1Q15075 1411 aa24.72■■□□□ 1.55
CCDC59-201ENST00000256151 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.69■■□□□ 1.54
CCDC59-201ENST00000256151 TNIKQ9UKE5 1360 aa24.69■■□□□ 1.54
CCDC59-201ENST00000256151 DNAJC5BQ9UF47 199 aa24.65■■□□□ 1.54
CCDC59-201ENST00000256151 CEP162Q5TB80 1403 aa24.62■■□□□ 1.53
CCDC59-201ENST00000256151 ABCC8Q09428 1581 aa24.59■■□□□ 1.53
CCDC59-201ENST00000256151 CENPBP07199 599 aaPredicted RBP24.56■■□□□ 1.52
CCDC59-201ENST00000256151 DIEXFQ68CQ4 756 aaKnown RBP24.56■■□□□ 1.52
CCDC59-201ENST00000256151 NEUROD1Q13562 356 aa24.52■■□□□ 1.52
CCDC59-201ENST00000256151 CFTRP13569 1480 aa24.5■■□□□ 1.51
CCDC59-201ENST00000256151 SOGA1O94964 1423 aa24.46■■□□□ 1.51
CCDC59-201ENST00000256151 CSRNP3Q8WYN3 585 aa24.45■■□□□ 1.51
CCDC59-201ENST00000256151 CADPSQ9ULU8 1353 aa24.45■■□□□ 1.51
CCDC59-201ENST00000256151 GOLGA3Q08378 1498 aa24.43■■□□□ 1.5
CCDC59-201ENST00000256151 NESP48681 1621 aa24.36■■□□□ 1.49
CCDC59-201ENST00000256151 ZNF316A6NFI3 1004 aaPredicted RBP24.36■■□□□ 1.49
CCDC59-201ENST00000256151 MYT1Q01538 1121 aa24.32■■□□□ 1.48
CCDC59-201ENST00000256151 GTF3C3Q9Y5Q9 886 aa24.32■■□□□ 1.48
CCDC59-201ENST00000256151 KIF21BO75037 1637 aa24.3■■□□□ 1.48
CCDC59-201ENST00000256151 PRDM2Q13029 1718 aa24.3■■□□□ 1.48
CCDC59-201ENST00000256151 SYNJ1O43426 1573 aa24.3■■□□□ 1.48
CCDC59-201ENST00000256151 RUSC2Q8N2Y8 1516 aa24.28■■□□□ 1.48
CCDC59-201ENST00000256151 CEP164Q9UPV0 1460 aa24.26■■□□□ 1.47
CCDC59-201ENST00000256151 UBTFP17480 764 aaKnown RBP24.25■■□□□ 1.47
CCDC59-201ENST00000256151 LAMC3Q9Y6N6 1575 aa24.22■■□□□ 1.47
CCDC59-201ENST00000256151 FANCD2Q9BXW9 1451 aa24.2■■□□□ 1.46
CCDC59-201ENST00000256151 CUX1P39880 1505 aa24.16■■□□□ 1.46
CCDC59-201ENST00000256151 TOP2BQ02880 1626 aa24.15■■□□□ 1.46
CCDC59-201ENST00000256151 VPS8Q8N3P4 1428 aa24.11■■□□□ 1.45
CCDC59-201ENST00000256151 BIVM-ERCC5R4GMW8 1640 aa24.11■■□□□ 1.45
CCDC59-201ENST00000256151 CLIP1P30622 1438 aa24.09■■□□□ 1.45
CCDC59-201ENST00000256151 TTBK1Q5TCY1 1321 aaPredicted RBP24.09■■□□□ 1.45
CCDC59-201ENST00000256151 PDS5BQ9NTI5 1447 aa24.06■■□□□ 1.44
CCDC59-201ENST00000256151 KIF21AQ7Z4S6 1674 aa24.01■■□□□ 1.43
CCDC59-201ENST00000256151 CLSPNQ9HAW4 1339 aa24■■□□□ 1.43
CCDC59-201ENST00000256151 DNMBPQ6XZF7 1577 aa23.92■■□□□ 1.42
CCDC59-201ENST00000256151 MIER1Q8N108 512 aa23.92■■□□□ 1.42
CCDC59-201ENST00000256151 URB2Q14146 1524 aaKnown RBP23.92■■□□□ 1.42
CCDC59-201ENST00000256151 TOPBP1Q92547 1522 aa23.92■■□□□ 1.42
CCDC59-201ENST00000256151 FGD5Q6ZNL6 1462 aa23.91■■□□□ 1.42
CCDC59-201ENST00000256151 APLP2Q06481 763 aa23.91■■□□□ 1.42
CCDC59-201ENST00000256151 HNRNPUL2Q1KMD3 747 aaKnown RBP23.9■■□□□ 1.42
CCDC59-201ENST00000256151 RAPGEF2Q9Y4G8 1499 aa23.88■■□□□ 1.41
CCDC59-201ENST00000256151 ERICH3Q5RHP9 1530 aa23.86■■□□□ 1.41
CCDC59-201ENST00000256151 POLA1P09884 1462 aaPredicted RBP23.81■■□□□ 1.4
CCDC59-201ENST00000256151 ERCC6Q03468 1493 aa23.79■■□□□ 1.4
CCDC59-201ENST00000256151 RAD54L2Q9Y4B4 1467 aa23.78■■□□□ 1.4
CCDC59-201ENST00000256151 YTHDC1Q96MU7 727 aaKnown RBP23.77■■□□□ 1.4
CCDC59-201ENST00000256151 MRC2Q9UBG0 1479 aa23.76■■□□□ 1.39
CCDC59-201ENST00000256151 CUX2O14529 1486 aa23.75■■□□□ 1.39
CCDC59-201ENST00000256151 PRXQ9BXM0 1461 aa23.74■■□□□ 1.39
CCDC59-201ENST00000256151 KIF27Q86VH2 1401 aa23.74■■□□□ 1.39
CCDC59-201ENST00000256151 DHX57Q6P158 1386 aaKnown RBP23.72■■□□□ 1.39
CCDC59-201ENST00000256151 ARAP1Q96P48 1450 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms