RNA–Protein interactions for RNA: ENST00000355502.7

PDE4C-202, Transcript of phosphodiesterase 4C, humanhuman

APPRIS P3 TSL 2 BASIC

Gene PDE4C, Length 5,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-202ENST00000355502 NISCHQ9Y2I1 1504 aa27.36■■□□□ 1.97
PDE4C-202ENST00000355502 DCAF8L2P0C7V8 631 aa26.98■■□□□ 1.91
PDE4C-202ENST00000355502 SUPT5HO00267 1087 aaKnown RBP26.71■■□□□ 1.87
PDE4C-202ENST00000355502 SHROOM4Q9ULL8 1493 aa26.23■■□□□ 1.79
PDE4C-202ENST00000355502 PCGF6Q9BYE7 350 aa25.75■■□□□ 1.71
PDE4C-202ENST00000355502 PELP1Q8IZL8 1130 aaKnown RBP25.71■■□□□ 1.71
PDE4C-202ENST00000355502 EHMT2Q96KQ7 1210 aa25.46■■□□□ 1.67
PDE4C-202ENST00000355502 ZEB1P37275 1124 aaPredicted RBP25.42■■□□□ 1.66
PDE4C-202ENST00000355502 CENPBP07199 599 aaPredicted RBP25.26■■□□□ 1.63
PDE4C-202ENST00000355502 MYT1Q01538 1121 aa25.2■■□□□ 1.63
PDE4C-202ENST00000355502 HRCP23327 699 aa25.11■■□□□ 1.61
PDE4C-202ENST00000355502 FAM9AQ8IZU1 332 aaPredicted RBP25.05■■□□□ 1.6
PDE4C-202ENST00000355502 APLP2Q06481 763 aa24.98■■□□□ 1.59
PDE4C-202ENST00000355502 CCER1Q8TC90 406 aaPredicted RBP24.9■■□□□ 1.58
PDE4C-202ENST00000355502 TRIM41Q8WV44 630 aa24.78■■□□□ 1.56
PDE4C-202ENST00000355502 TTBK1Q5TCY1 1321 aaPredicted RBP24.77■■□□□ 1.56
PDE4C-202ENST00000355502 TRIM26Q12899 539 aaPredicted RBP24.77■■□□□ 1.56
PDE4C-202ENST00000355502 ERICH6Q7L0X2 663 aa24.57■■□□□ 1.52
PDE4C-202ENST00000355502 YTHDC1Q96MU7 727 aaKnown RBP24.49■■□□□ 1.51
PDE4C-202ENST00000355502 CHIC1Q5VXU3 224 aa24.44■■□□□ 1.5
PDE4C-202ENST00000355502 PPARGC1BQ86YN6 1023 aaKnown RBP24.44■■□□□ 1.5
PDE4C-202ENST00000355502 NEFLP07196 543 aa24.27■■□□□ 1.48
PDE4C-202ENST00000355502 LOC105371045A0A1W2PR82 267 aa24.26■■□□□ 1.47
PDE4C-202ENST00000355502 UBTFP17480 764 aaKnown RBP24.21■■□□□ 1.47
PDE4C-202ENST00000355502 RANGAP1P46060 587 aaPredicted RBP24.12■■□□□ 1.45
PDE4C-202ENST00000355502 DIEXFQ68CQ4 756 aaKnown RBP23.94■■□□□ 1.42
PDE4C-202ENST00000355502 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.81■■□□□ 1.4
PDE4C-202ENST00000355502 GTF3C3Q9Y5Q9 886 aa23.75■■□□□ 1.39
PDE4C-202ENST00000355502 ATP1B4Q9UN42 357 aaPredicted RBP23.74■■□□□ 1.39
PDE4C-202ENST00000355502 HNRNPUL2Q1KMD3 747 aaKnown RBP23.65■■□□□ 1.38
PDE4C-202ENST00000355502 ACIN1Q9UKV3 1341 aaKnown RBP23.59■■□□□ 1.37
PDE4C-202ENST00000355502 DCAF1Q9Y4B6 1507 aa23.44■■□□□ 1.34
PDE4C-202ENST00000355502 ITGAEP38570 1179 aa23.43■■□□□ 1.34
PDE4C-202ENST00000355502 ZNF316A6NFI3 1004 aaPredicted RBP23.37■■□□□ 1.33
PDE4C-202ENST00000355502 DAXXQ9UER7 740 aaPredicted RBP23.3■■□□□ 1.32
PDE4C-202ENST00000355502 RTL5Q5HYW3 569 aaPredicted RBP23.22■■□□□ 1.31
PDE4C-202ENST00000355502 BCANQ96GW7 911 aa23.16■■□□□ 1.3
PDE4C-202ENST00000355502 SCAF1Q9H7N4 1312 aaKnown RBP23.15■■□□□ 1.3
PDE4C-202ENST00000355502 CLSPNQ9HAW4 1339 aa23.09■■□□□ 1.29
PDE4C-202ENST00000355502 POLR3GLQ9BT43 218 aa23.06■■□□□ 1.28
PDE4C-202ENST00000355502 NEUROD1Q13562 356 aa23.04■■□□□ 1.28
PDE4C-202ENST00000355502 CDK11AQ9UQ88 783 aaPredicted RBP23.02■■□□□ 1.28
PDE4C-202ENST00000355502 ANP32CO43423 234 aa22.98■■□□□ 1.27
PDE4C-202ENST00000355502 MYO15BQ96JP2 1530 aa22.91■■□□□ 1.26
PDE4C-202ENST00000355502 FAM50AQ14320 339 aaKnown RBP22.89■■□□□ 1.25
PDE4C-202ENST00000355502 CNGB1Q14028 1251 aaPredicted RBP22.88■■□□□ 1.25
PDE4C-202ENST00000355502 ZCCHC6Q5VYS8 1495 aaKnown RBP22.87■■□□□ 1.25
PDE4C-202ENST00000355502 CCDC180Q9P1Z9 1646 aa22.81■■□□□ 1.24
PDE4C-202ENST00000355502 CSRNP3Q8WYN3 585 aa22.73■■□□□ 1.23
PDE4C-202ENST00000355502 FKBP8Q14318 412 aa22.69■■□□□ 1.22
PDE4C-202ENST00000355502 ABCC9O60706 1549 aa22.68■■□□□ 1.22
PDE4C-202ENST00000355502 TRIM52Q96A61 297 aa22.64■■□□□ 1.21
PDE4C-202ENST00000355502 ANP32AP39687 249 aaKnown RBP22.6■■□□□ 1.21
PDE4C-202ENST00000355502 MYT1LQ9UL68 1186 aa22.59■■□□□ 1.21
PDE4C-202ENST00000355502 MIER1Q8N108 512 aa22.58■■□□□ 1.2
PDE4C-202ENST00000355502 PABPN1Q86U42 306 aaKnown RBP eCLIP22.44■■□□□ 1.18
PDE4C-202ENST00000355502 DDX10Q13206 875 aaKnown RBP22.39■■□□□ 1.17
PDE4C-202ENST00000355502 SCRIBQ14160 1630 aa22.38■■□□□ 1.17
PDE4C-202ENST00000355502 HNRNPUQ00839 825 aaKnown RBP eCLIP22.36■■□□□ 1.17
PDE4C-202ENST00000355502 ANP32EQ9BTT0 268 aa22.36■■□□□ 1.17
PDE4C-202ENST00000355502 ZNF326Q5BKZ1 582 aaKnown RBP22.33■■□□□ 1.16
PDE4C-202ENST00000355502 TONSLQ96HA7 1378 aa22.31■■□□□ 1.16
PDE4C-202ENST00000355502 NPM2Q86SE8 214 aaKnown RBP22.3■■□□□ 1.16
PDE4C-202ENST00000355502 SLC4A1APQ9BWU0 796 aaKnown RBP22.25■■□□□ 1.15
PDE4C-202ENST00000355502 NBR1Q14596 966 aa22.19■■□□□ 1.14
PDE4C-202ENST00000355502 CEP162Q5TB80 1403 aa22.19■■□□□ 1.14
PDE4C-202ENST00000355502 ZBTB47Q9UFB7 747 aaPredicted RBP22.18■■□□□ 1.14
PDE4C-202ENST00000355502 EIF5BO60841 1220 aaKnown RBP22.17■■□□□ 1.14
PDE4C-202ENST00000355502 FAM9BQ8IZU0 186 aa22.15■■□□□ 1.14
PDE4C-202ENST00000355502 P3H3Q8IVL6 736 aa22.15■■□□□ 1.14
PDE4C-202ENST00000355502 CLIP1P30622 1438 aa22.13■■□□□ 1.13
PDE4C-202ENST00000355502 CANXP27824 592 aaKnown RBP22.12■■□□□ 1.13
PDE4C-202ENST00000355502 CCDC136Q96JN2 1154 aa22.12■■□□□ 1.13
PDE4C-202ENST00000355502 EEA1Q15075 1411 aa22.11■■□□□ 1.13
PDE4C-202ENST00000355502 RSF1Q96T23 1441 aaPredicted RBP22.1■■□□□ 1.13
PDE4C-202ENST00000355502 SUPT16HQ9Y5B9 1047 aaKnown RBP22.09■■□□□ 1.13
PDE4C-202ENST00000355502 GOLGA3Q08378 1498 aa22.07■■□□□ 1.12
PDE4C-202ENST00000355502 IRX6P78412 446 aaPredicted RBP22.03■■□□□ 1.12
PDE4C-202ENST00000355502 TNIKQ9UKE5 1360 aa22.01■■□□□ 1.11
PDE4C-202ENST00000355502 MRS2Q9HD23 443 aa21.99■■□□□ 1.11
PDE4C-202ENST00000355502 GLIPR1L2Q4G1C9 344 aa21.99■■□□□ 1.11
PDE4C-202ENST00000355502 HIRIP3Q9BW71 556 aaPredicted RBP21.91■■□□□ 1.1
PDE4C-202ENST00000355502 TMC1Q8TDI8 760 aa21.9■■□□□ 1.1
PDE4C-202ENST00000355502 RB1CC1Q8TDY2 1594 aa21.89■■□□□ 1.1
PDE4C-202ENST00000355502 UPF2Q9HAU5 1272 aaKnown RBP21.88■■□□□ 1.09
PDE4C-202ENST00000355502 BCL11AQ9H165 835 aa21.88■■□□□ 1.09
PDE4C-202ENST00000355502 ANP32BQ92688 251 aaKnown RBP21.86■■□□□ 1.09
PDE4C-202ENST00000355502 EIF4G2P78344 907 aaKnown RBP eCLIP21.82■■□□□ 1.08
PDE4C-202ENST00000355502 CEP164Q9UPV0 1460 aa21.81■■□□□ 1.08
PDE4C-202ENST00000355502 ARID3CA6NKF2 412 aa21.8■■□□□ 1.08
PDE4C-202ENST00000355502 DDRGK1Q96HY6 314 aa21.8■■□□□ 1.08
PDE4C-202ENST00000355502 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.8■■□□□ 1.08
PDE4C-202ENST00000355502 SALL2Q9Y467 1007 aaPredicted RBP21.79■■□□□ 1.08
PDE4C-202ENST00000355502 PPP4R2Q9NY27 417 aa21.78■■□□□ 1.08
PDE4C-202ENST00000355502 ZNF777Q9ULD5 760 aaPredicted RBP21.76■■□□□ 1.07
PDE4C-202ENST00000355502 CHIC2Q9UKJ5 165 aa21.73■■□□□ 1.07
PDE4C-202ENST00000355502 NOP58Q9Y2X3 529 aaKnown RBP21.73■■□□□ 1.07
PDE4C-202ENST00000355502 HSP90AA1P07900 732 aaKnown RBP21.72■■□□□ 1.07
PDE4C-202ENST00000355502 RBM19Q9Y4C8 960 aaKnown RBP21.71■■□□□ 1.07
PDE4C-202ENST00000355502 WRNQ14191 1432 aaPredicted RBP eCLIP21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms