RNA–Protein interactions for RNA: ENST00000618229.4

SURF4-209, Transcript of surfeit 4, humanhuman

TSL 2 BASIC

Gene SURF4, Length 3,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF4-209ENST00000618229 NISCHQ9Y2I1 1504 aa30.94■■■□□ 2.54
SURF4-209ENST00000618229 SHROOM4Q9ULL8 1493 aa28.35■■■□□ 2.13
SURF4-209ENST00000618229 SUPT5HO00267 1087 aaKnown RBP28.19■■■□□ 2.1
SURF4-209ENST00000618229 PCGF6Q9BYE7 350 aa27.52■■■□□ 2
SURF4-209ENST00000618229 HRCP23327 699 aa27.43■■□□□ 1.98
SURF4-209ENST00000618229 PPARGC1BQ86YN6 1023 aaKnown RBP27.43■■□□□ 1.98
SURF4-209ENST00000618229 DCAF8L2P0C7V8 631 aa27.31■■□□□ 1.96
SURF4-209ENST00000618229 CHIC1Q5VXU3 224 aa27.06■■□□□ 1.92
SURF4-209ENST00000618229 MYO15BQ96JP2 1530 aa27.03■■□□□ 1.92
SURF4-209ENST00000618229 LOC105371045A0A1W2PR82 267 aa26.85■■□□□ 1.89
SURF4-209ENST00000618229 EHMT2Q96KQ7 1210 aa26.56■■□□□ 1.84
SURF4-209ENST00000618229 FAM9AQ8IZU1 332 aaPredicted RBP26.26■■□□□ 1.79
SURF4-209ENST00000618229 TRIM26Q12899 539 aaPredicted RBP26.25■■□□□ 1.79
SURF4-209ENST00000618229 ZCCHC6Q5VYS8 1495 aaKnown RBP26.16■■□□□ 1.78
SURF4-209ENST00000618229 DCAF1Q9Y4B6 1507 aa25.97■■□□□ 1.75
SURF4-209ENST00000618229 SCAF1Q9H7N4 1312 aaKnown RBP25.96■■□□□ 1.75
SURF4-209ENST00000618229 TRIM41Q8WV44 630 aa25.81■■□□□ 1.72
SURF4-209ENST00000618229 TTBK1Q5TCY1 1321 aaPredicted RBP25.77■■□□□ 1.72
SURF4-209ENST00000618229 ZEB1P37275 1124 aaPredicted RBP25.76■■□□□ 1.71
SURF4-209ENST00000618229 PELP1Q8IZL8 1130 aaKnown RBP25.76■■□□□ 1.71
SURF4-209ENST00000618229 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.63■■□□□ 1.69
SURF4-209ENST00000618229 CCDC180Q9P1Z9 1646 aa25.54■■□□□ 1.68
SURF4-209ENST00000618229 CCER1Q8TC90 406 aaPredicted RBP25.52■■□□□ 1.68
SURF4-209ENST00000618229 NEUROD1Q13562 356 aa25.45■■□□□ 1.66
SURF4-209ENST00000618229 GTF3C3Q9Y5Q9 886 aa25.37■■□□□ 1.65
SURF4-209ENST00000618229 ACIN1Q9UKV3 1341 aaKnown RBP25.33■■□□□ 1.64
SURF4-209ENST00000618229 YTHDC1Q96MU7 727 aaKnown RBP25.31■■□□□ 1.64
SURF4-209ENST00000618229 DIEXFQ68CQ4 756 aaKnown RBP25.23■■□□□ 1.63
SURF4-209ENST00000618229 CENPBP07199 599 aaPredicted RBP25.14■■□□□ 1.62
SURF4-209ENST00000618229 RSF1Q96T23 1441 aaPredicted RBP25.02■■□□□ 1.6
SURF4-209ENST00000618229 SCRIBQ14160 1630 aa24.92■■□□□ 1.58
SURF4-209ENST00000618229 RB1CC1Q8TDY2 1594 aa24.91■■□□□ 1.58
SURF4-209ENST00000618229 ABCC9O60706 1549 aa24.77■■□□□ 1.56
SURF4-209ENST00000618229 HNRNPUL2Q1KMD3 747 aaKnown RBP24.73■■□□□ 1.55
SURF4-209ENST00000618229 RANGAP1P46060 587 aaPredicted RBP24.73■■□□□ 1.55
SURF4-209ENST00000618229 UBTFP17480 764 aaKnown RBP24.71■■□□□ 1.55
SURF4-209ENST00000618229 ZNF316A6NFI3 1004 aaPredicted RBP24.65■■□□□ 1.54
SURF4-209ENST00000618229 MIER1Q8N108 512 aa24.64■■□□□ 1.54
SURF4-209ENST00000618229 CECR2Q9BXF3 1484 aa24.58■■□□□ 1.53
SURF4-209ENST00000618229 MYT1Q01538 1121 aa24.52■■□□□ 1.52
SURF4-209ENST00000618229 MROH2BQ7Z745 1585 aa24.37■■□□□ 1.49
SURF4-209ENST00000618229 CEP162Q5TB80 1403 aa24.33■■□□□ 1.48
SURF4-209ENST00000618229 WIZO95785 1651 aa24.28■■□□□ 1.48
SURF4-209ENST00000618229 ABCC8Q09428 1581 aa24.27■■□□□ 1.48
SURF4-209ENST00000618229 SOGA1O94964 1423 aa24.25■■□□□ 1.47
SURF4-209ENST00000618229 CCDC88BA6NC98 1476 aa24.24■■□□□ 1.47
SURF4-209ENST00000618229 APLP2Q06481 763 aa24.23■■□□□ 1.47
SURF4-209ENST00000618229 CSRNP3Q8WYN3 585 aa24.22■■□□□ 1.47
SURF4-209ENST00000618229 BCANQ96GW7 911 aa24.14■■□□□ 1.45
SURF4-209ENST00000618229 RUSC2Q8N2Y8 1516 aa24.12■■□□□ 1.45
SURF4-209ENST00000618229 ITGAEP38570 1179 aa24.05■■□□□ 1.44
SURF4-209ENST00000618229 SUPT16HQ9Y5B9 1047 aaKnown RBP24.01■■□□□ 1.43
SURF4-209ENST00000618229 TNIKQ9UKE5 1360 aa23.99■■□□□ 1.43
SURF4-209ENST00000618229 WRNQ14191 1432 aaPredicted RBP eCLIP23.96■■□□□ 1.43
SURF4-209ENST00000618229 KCNH8Q96L42 1107 aa23.88■■□□□ 1.41
SURF4-209ENST00000618229 PABPN1Q86U42 306 aaKnown RBP eCLIP23.83■■□□□ 1.41
SURF4-209ENST00000618229 TSHZ2Q9NRE2 1034 aa23.81■■□□□ 1.4
SURF4-209ENST00000618229 CLIP1P30622 1438 aa23.77■■□□□ 1.4
SURF4-209ENST00000618229 GOLGA3Q08378 1498 aa23.75■■□□□ 1.39
SURF4-209ENST00000618229 BAZ1AQ9NRL2 1556 aaPredicted RBP23.73■■□□□ 1.39
SURF4-209ENST00000618229 FKBP8Q14318 412 aa23.71■■□□□ 1.39
SURF4-209ENST00000618229 HIRIP3Q9BW71 556 aaPredicted RBP23.7■■□□□ 1.38
SURF4-209ENST00000618229 ANP32EQ9BTT0 268 aa23.67■■□□□ 1.38
SURF4-209ENST00000618229 DDX10Q13206 875 aaKnown RBP23.62■■□□□ 1.37
SURF4-209ENST00000618229 KANK4Q5T7N3 995 aaPredicted RBP23.62■■□□□ 1.37
SURF4-209ENST00000618229 EIF4G1Q04637 1599 aaKnown RBP23.59■■□□□ 1.37
SURF4-209ENST00000618229 TRIM52Q96A61 297 aa23.59■■□□□ 1.37
SURF4-209ENST00000618229 NACADO15069 1562 aa23.58■■□□□ 1.37
SURF4-209ENST00000618229 EEA1Q15075 1411 aa23.54■■□□□ 1.36
SURF4-209ENST00000618229 BCL11AQ9H165 835 aa23.54■■□□□ 1.36
SURF4-209ENST00000618229 SMARCA2P51531 1590 aa23.54■■□□□ 1.36
SURF4-209ENST00000618229 DHX57Q6P158 1386 aaKnown RBP23.54■■□□□ 1.36
SURF4-209ENST00000618229 TOP2AP11388 1531 aaKnown RBP23.53■■□□□ 1.36
SURF4-209ENST00000618229 VPS8Q8N3P4 1428 aa23.52■■□□□ 1.36
SURF4-209ENST00000618229 ATP1B4Q9UN42 357 aaPredicted RBP23.52■■□□□ 1.36
SURF4-209ENST00000618229 NEFLP07196 543 aa23.5■■□□□ 1.35
SURF4-209ENST00000618229 RAPGEF2Q9Y4G8 1499 aa23.49■■□□□ 1.35
SURF4-209ENST00000618229 CEP164Q9UPV0 1460 aa23.48■■□□□ 1.35
SURF4-209ENST00000618229 SIN3AQ96ST3 1273 aa23.42■■□□□ 1.34
SURF4-209ENST00000618229 IRX6P78412 446 aaPredicted RBP23.41■■□□□ 1.34
SURF4-209ENST00000618229 CLSPNQ9HAW4 1339 aa23.39■■□□□ 1.34
SURF4-209ENST00000618229 FAM50AQ14320 339 aaKnown RBP23.37■■□□□ 1.33
SURF4-209ENST00000618229 SMARCA4P51532 1647 aa23.37■■□□□ 1.33
SURF4-209ENST00000618229 RBM19Q9Y4C8 960 aaKnown RBP23.35■■□□□ 1.33
SURF4-209ENST00000618229 SYNJ1O43426 1573 aa23.28■■□□□ 1.32
SURF4-209ENST00000618229 P3H3Q8IVL6 736 aa23.27■■□□□ 1.32
SURF4-209ENST00000618229 KIF21BO75037 1637 aa23.26■■□□□ 1.31
SURF4-209ENST00000618229 ERICH6Q7L0X2 663 aa23.25■■□□□ 1.31
SURF4-209ENST00000618229 ANP32CO43423 234 aa23.2■■□□□ 1.3
SURF4-209ENST00000618229 CNGB1Q14028 1251 aaPredicted RBP23.18■■□□□ 1.3
SURF4-209ENST00000618229 RAB3GAP2Q9H2M9 1393 aa23.16■■□□□ 1.3
SURF4-209ENST00000618229 CCNB3Q8WWL7 1395 aa23.15■■□□□ 1.3
SURF4-209ENST00000618229 HNRNPUQ00839 825 aaKnown RBP eCLIP23.1■■□□□ 1.29
SURF4-209ENST00000618229 MSH5O43196 834 aa23.06■■□□□ 1.28
SURF4-209ENST00000618229 ARAP1Q96P48 1450 aa23.05■■□□□ 1.28
SURF4-209ENST00000618229 SENP3-EIF4A1A0A087X0R7 540 aa23.02■■□□□ 1.28
SURF4-209ENST00000618229 BAZ1BQ9UIG0 1483 aaKnown RBP23.02■■□□□ 1.28
SURF4-209ENST00000618229 CDK11AQ9UQ88 783 aaPredicted RBP22.99■■□□□ 1.27
SURF4-209ENST00000618229 PPP1R15AO75807 674 aaPredicted RBP22.96■■□□□ 1.27
SURF4-209ENST00000618229 WDR97A6NE52 1622 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms