RNA–Protein interactions for RNA: ENST00000258362.7

PNKD-202, Transcript of PNKD, MBL domain containing, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PNKD, Length 2,991 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKD-202ENST00000258362 NISCHQ9Y2I1 1504 aa33.57■■■□□ 2.96
PNKD-202ENST00000258362 SHROOM4Q9ULL8 1493 aa29.77■■■□□ 2.36
PNKD-202ENST00000258362 SUPT5HO00267 1087 aaKnown RBP29.21■■■□□ 2.27
PNKD-202ENST00000258362 DCAF8L2P0C7V8 631 aa29.2■■■□□ 2.27
PNKD-202ENST00000258362 ZCCHC6Q5VYS8 1495 aaKnown RBP28.29■■■□□ 2.12
PNKD-202ENST00000258362 CCDC180Q9P1Z9 1646 aa28.28■■■□□ 2.12
PNKD-202ENST00000258362 CHIC1Q5VXU3 224 aa27.89■■■□□ 2.06
PNKD-202ENST00000258362 MYO15BQ96JP2 1530 aa27.78■■■□□ 2.04
PNKD-202ENST00000258362 LOC105371045A0A1W2PR82 267 aa27.51■■■□□ 2
PNKD-202ENST00000258362 PCGF6Q9BYE7 350 aa27.47■■□□□ 1.99
PNKD-202ENST00000258362 EHMT2Q96KQ7 1210 aa27.39■■□□□ 1.98
PNKD-202ENST00000258362 FAM9AQ8IZU1 332 aaPredicted RBP27.18■■□□□ 1.94
PNKD-202ENST00000258362 DCAF1Q9Y4B6 1507 aa27.17■■□□□ 1.94
PNKD-202ENST00000258362 SCRIBQ14160 1630 aa27.1■■□□□ 1.93
PNKD-202ENST00000258362 PPARGC1BQ86YN6 1023 aaKnown RBP27.06■■□□□ 1.92
PNKD-202ENST00000258362 ABCC9O60706 1549 aa27.05■■□□□ 1.92
PNKD-202ENST00000258362 HRCP23327 699 aa27■■□□□ 1.91
PNKD-202ENST00000258362 TRIM41Q8WV44 630 aa26.86■■□□□ 1.89
PNKD-202ENST00000258362 RSF1Q96T23 1441 aaPredicted RBP26.78■■□□□ 1.88
PNKD-202ENST00000258362 CECR2Q9BXF3 1484 aa26.6■■□□□ 1.85
PNKD-202ENST00000258362 RB1CC1Q8TDY2 1594 aa26.57■■□□□ 1.84
PNKD-202ENST00000258362 TRIM26Q12899 539 aaPredicted RBP26.44■■□□□ 1.82
PNKD-202ENST00000258362 TTBK1Q5TCY1 1321 aaPredicted RBP26.41■■□□□ 1.82
PNKD-202ENST00000258362 MROH2BQ7Z745 1585 aa26.34■■□□□ 1.81
PNKD-202ENST00000258362 PABPN1Q86U42 306 aaKnown RBP eCLIP26.23■■□□□ 1.79
PNKD-202ENST00000258362 WIZO95785 1651 aa26.19■■□□□ 1.78
PNKD-202ENST00000258362 NACADO15069 1562 aa26.19■■□□□ 1.78
PNKD-202ENST00000258362 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.89■■□□□ 1.74
PNKD-202ENST00000258362 ABCC8Q09428 1581 aa25.84■■□□□ 1.73
PNKD-202ENST00000258362 RANGAP1P46060 587 aaPredicted RBP25.82■■□□□ 1.72
PNKD-202ENST00000258362 UBTFP17480 764 aaKnown RBP25.75■■□□□ 1.71
PNKD-202ENST00000258362 CCDC88BA6NC98 1476 aa25.72■■□□□ 1.71
PNKD-202ENST00000258362 BAZ1AQ9NRL2 1556 aaPredicted RBP25.7■■□□□ 1.7
PNKD-202ENST00000258362 CCER1Q8TC90 406 aaPredicted RBP25.68■■□□□ 1.7
PNKD-202ENST00000258362 SOGA1O94964 1423 aa25.65■■□□□ 1.7
PNKD-202ENST00000258362 ZEB1P37275 1124 aaPredicted RBP25.6■■□□□ 1.69
PNKD-202ENST00000258362 RUSC2Q8N2Y8 1516 aa25.56■■□□□ 1.68
PNKD-202ENST00000258362 SMARCA4P51532 1647 aa25.52■■□□□ 1.68
PNKD-202ENST00000258362 TOP2AP11388 1531 aaKnown RBP25.47■■□□□ 1.67
PNKD-202ENST00000258362 CSRNP3Q8WYN3 585 aa25.46■■□□□ 1.67
PNKD-202ENST00000258362 UNC13AQ9UPW8 1703 aa25.45■■□□□ 1.67
PNKD-202ENST00000258362 SMARCA2P51531 1590 aa25.44■■□□□ 1.66
PNKD-202ENST00000258362 CEP162Q5TB80 1403 aa25.39■■□□□ 1.65
PNKD-202ENST00000258362 EIF4G1Q04637 1599 aaKnown RBP25.36■■□□□ 1.65
PNKD-202ENST00000258362 HNRNPUL2Q1KMD3 747 aaKnown RBP25.34■■□□□ 1.65
PNKD-202ENST00000258362 WRNQ14191 1432 aaPredicted RBP eCLIP25.21■■□□□ 1.63
PNKD-202ENST00000258362 BICRAQ9NZM4 1560 aa25.21■■□□□ 1.63
PNKD-202ENST00000258362 TNIKQ9UKE5 1360 aa25.13■■□□□ 1.61
PNKD-202ENST00000258362 SCAF1Q9H7N4 1312 aaKnown RBP25.11■■□□□ 1.61
PNKD-202ENST00000258362 DIEXFQ68CQ4 756 aaKnown RBP25.05■■□□□ 1.6
PNKD-202ENST00000258362 BAZ1BQ9UIG0 1483 aaKnown RBP25.04■■□□□ 1.6
PNKD-202ENST00000258362 APLP2Q06481 763 aa25.04■■□□□ 1.6
PNKD-202ENST00000258362 ATAD2BQ9ULI0 1458 aa25.01■■□□□ 1.59
PNKD-202ENST00000258362 SYNJ1O43426 1573 aa25■■□□□ 1.59
PNKD-202ENST00000258362 GOLGA3Q08378 1498 aa25■■□□□ 1.59
PNKD-202ENST00000258362 YTHDC1Q96MU7 727 aaKnown RBP24.98■■□□□ 1.59
PNKD-202ENST00000258362 CLIP1P30622 1438 aa24.93■■□□□ 1.58
PNKD-202ENST00000258362 RAPGEF2Q9Y4G8 1499 aa24.91■■□□□ 1.58
PNKD-202ENST00000258362 NEUROD1Q13562 356 aa24.9■■□□□ 1.58
PNKD-202ENST00000258362 EEA1Q15075 1411 aa24.88■■□□□ 1.57
PNKD-202ENST00000258362 ITGAEP38570 1179 aa24.86■■□□□ 1.57
PNKD-202ENST00000258362 CEP164Q9UPV0 1460 aa24.81■■□□□ 1.56
PNKD-202ENST00000258362 PEG3Q9GZU2 1588 aa24.81■■□□□ 1.56
PNKD-202ENST00000258362 KANK4Q5T7N3 995 aaPredicted RBP24.71■■□□□ 1.55
PNKD-202ENST00000258362 ACIN1Q9UKV3 1341 aaKnown RBP24.7■■□□□ 1.55
PNKD-202ENST00000258362 ZNF316A6NFI3 1004 aaPredicted RBP24.69■■□□□ 1.54
PNKD-202ENST00000258362 GTF3C3Q9Y5Q9 886 aa24.68■■□□□ 1.54
PNKD-202ENST00000258362 ATP1B4Q9UN42 357 aaPredicted RBP24.67■■□□□ 1.54
PNKD-202ENST00000258362 VPS8Q8N3P4 1428 aa24.64■■□□□ 1.54
PNKD-202ENST00000258362 P3H3Q8IVL6 736 aa24.62■■□□□ 1.53
PNKD-202ENST00000258362 MIER1Q8N108 512 aa24.6■■□□□ 1.53
PNKD-202ENST00000258362 KIF21BO75037 1637 aa24.54■■□□□ 1.52
PNKD-202ENST00000258362 CENPBP07199 599 aaPredicted RBP24.54■■□□□ 1.52
PNKD-202ENST00000258362 CUX1P39880 1505 aa24.44■■□□□ 1.5
PNKD-202ENST00000258362 TOP2BQ02880 1626 aa24.44■■□□□ 1.5
PNKD-202ENST00000258362 ARAP1Q96P48 1450 aa24.4■■□□□ 1.5
PNKD-202ENST00000258362 KIF27Q86VH2 1401 aa24.38■■□□□ 1.49
PNKD-202ENST00000258362 NCAPD3P42695 1498 aa24.34■■□□□ 1.49
PNKD-202ENST00000258362 CUX2O14529 1486 aa24.33■■□□□ 1.49
PNKD-202ENST00000258362 PRXQ9BXM0 1461 aa24.33■■□□□ 1.49
PNKD-202ENST00000258362 FAM50AQ14320 339 aaKnown RBP24.32■■□□□ 1.48
PNKD-202ENST00000258362 DHX57Q6P158 1386 aaKnown RBP24.23■■□□□ 1.47
PNKD-202ENST00000258362 CFTRP13569 1480 aa24.23■■□□□ 1.47
PNKD-202ENST00000258362 HMGXB3Q12766 1538 aa24.22■■□□□ 1.47
PNKD-202ENST00000258362 BIVM-ERCC5R4GMW8 1640 aa24.19■■□□□ 1.46
PNKD-202ENST00000258362 ARHGAP35Q9NRY4 1499 aa24.19■■□□□ 1.46
PNKD-202ENST00000258362 IGF1RP08069 1367 aa24.19■■□□□ 1.46
PNKD-202ENST00000258362 HIRIP3Q9BW71 556 aaPredicted RBP24.18■■□□□ 1.46
PNKD-202ENST00000258362 DNAJC5BQ9UF47 199 aa24.15■■□□□ 1.46
PNKD-202ENST00000258362 CARMIL1Q5VZK9 1371 aa24.15■■□□□ 1.46
PNKD-202ENST00000258362 CCNB3Q8WWL7 1395 aa24.13■■□□□ 1.45
PNKD-202ENST00000258362 CADPSQ9ULU8 1353 aa24.13■■□□□ 1.45
PNKD-202ENST00000258362 SIN3AQ96ST3 1273 aa24.12■■□□□ 1.45
PNKD-202ENST00000258362 ERICH3Q5RHP9 1530 aa24.1■■□□□ 1.45
PNKD-202ENST00000258362 ARID3CA6NKF2 412 aa24.1■■□□□ 1.45
PNKD-202ENST00000258362 FGD5Q6ZNL6 1462 aa24.1■■□□□ 1.45
PNKD-202ENST00000258362 RAD54L2Q9Y4B4 1467 aa24.09■■□□□ 1.45
PNKD-202ENST00000258362 NESP48681 1621 aa24.06■■□□□ 1.44
PNKD-202ENST00000258362 KCNH8Q96L42 1107 aa24.04■■□□□ 1.44
PNKD-202ENST00000258362 RAB3GAP2Q9H2M9 1393 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms