RNA–Protein interactions for RNA: ENST00000507208.1

MBD4-206, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MBD4, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-206ENST00000507208 NISCHQ9Y2I1 1504 aa32.85■■■□□ 2.85
MBD4-206ENST00000507208 CCDC180Q9P1Z9 1646 aa28.35■■■□□ 2.13
MBD4-206ENST00000507208 ZCCHC6Q5VYS8 1495 aaKnown RBP27.95■■■□□ 2.06
MBD4-206ENST00000507208 SHROOM4Q9ULL8 1493 aa27.76■■■□□ 2.03
MBD4-206ENST00000507208 ABCC9O60706 1549 aa27.65■■■□□ 2.02
MBD4-206ENST00000507208 SUPT5HO00267 1087 aaKnown RBP27.39■■□□□ 1.98
MBD4-206ENST00000507208 DCAF1Q9Y4B6 1507 aa27.21■■□□□ 1.95
MBD4-206ENST00000507208 MYO15BQ96JP2 1530 aa27.16■■□□□ 1.94
MBD4-206ENST00000507208 CHIC1Q5VXU3 224 aa27.09■■□□□ 1.93
MBD4-206ENST00000507208 HRCP23327 699 aa27.02■■□□□ 1.92
MBD4-206ENST00000507208 DCAF8L2P0C7V8 631 aa26.9■■□□□ 1.9
MBD4-206ENST00000507208 NACADO15069 1562 aa26.58■■□□□ 1.85
MBD4-206ENST00000507208 RB1CC1Q8TDY2 1594 aa26.56■■□□□ 1.84
MBD4-206ENST00000507208 PCGF6Q9BYE7 350 aa26.46■■□□□ 1.83
MBD4-206ENST00000507208 UNC13AQ9UPW8 1703 aa26.14■■□□□ 1.77
MBD4-206ENST00000507208 TRIM26Q12899 539 aaPredicted RBP26.11■■□□□ 1.77
MBD4-206ENST00000507208 SCRIBQ14160 1630 aa26.07■■□□□ 1.76
MBD4-206ENST00000507208 LOC105371045A0A1W2PR82 267 aa26.07■■□□□ 1.76
MBD4-206ENST00000507208 PPARGC1BQ86YN6 1023 aaKnown RBP26.07■■□□□ 1.76
MBD4-206ENST00000507208 RSF1Q96T23 1441 aaPredicted RBP26.05■■□□□ 1.76
MBD4-206ENST00000507208 PABPN1Q86U42 306 aaKnown RBP eCLIP25.96■■□□□ 1.75
MBD4-206ENST00000507208 BICRAQ9NZM4 1560 aa25.88■■□□□ 1.73
MBD4-206ENST00000507208 ZEB1P37275 1124 aaPredicted RBP25.85■■□□□ 1.73
MBD4-206ENST00000507208 TRIM41Q8WV44 630 aa25.64■■□□□ 1.7
MBD4-206ENST00000507208 EIF4G1Q04637 1599 aaKnown RBP25.47■■□□□ 1.67
MBD4-206ENST00000507208 MROH2BQ7Z745 1585 aa25.45■■□□□ 1.67
MBD4-206ENST00000507208 BAZ1AQ9NRL2 1556 aaPredicted RBP25.44■■□□□ 1.66
MBD4-206ENST00000507208 CECR2Q9BXF3 1484 aa25.4■■□□□ 1.66
MBD4-206ENST00000507208 WIZO95785 1651 aa25.37■■□□□ 1.65
MBD4-206ENST00000507208 PELP1Q8IZL8 1130 aaKnown RBP25.33■■□□□ 1.65
MBD4-206ENST00000507208 DNAJC5BQ9UF47 199 aa25.22■■□□□ 1.63
MBD4-206ENST00000507208 FAM9AQ8IZU1 332 aaPredicted RBP25.2■■□□□ 1.62
MBD4-206ENST00000507208 WRNQ14191 1432 aaPredicted RBP eCLIP25.12■■□□□ 1.61
MBD4-206ENST00000507208 TOP2AP11388 1531 aaKnown RBP25.12■■□□□ 1.61
MBD4-206ENST00000507208 SCAF1Q9H7N4 1312 aaKnown RBP25.03■■□□□ 1.6
MBD4-206ENST00000507208 SMARCA4P51532 1647 aa24.98■■□□□ 1.59
MBD4-206ENST00000507208 CC2D2AQ9P2K1 1620 aa24.98■■□□□ 1.59
MBD4-206ENST00000507208 SMARCA2P51531 1590 aa24.95■■□□□ 1.58
MBD4-206ENST00000507208 EEA1Q15075 1411 aa24.91■■□□□ 1.58
MBD4-206ENST00000507208 CCDC88BA6NC98 1476 aa24.84■■□□□ 1.57
MBD4-206ENST00000507208 ABCC8Q09428 1581 aa24.84■■□□□ 1.57
MBD4-206ENST00000507208 TNIKQ9UKE5 1360 aa24.83■■□□□ 1.57
MBD4-206ENST00000507208 CEP162Q5TB80 1403 aa24.82■■□□□ 1.56
MBD4-206ENST00000507208 CCER1Q8TC90 406 aaPredicted RBP24.77■■□□□ 1.56
MBD4-206ENST00000507208 EHMT2Q96KQ7 1210 aa24.76■■□□□ 1.55
MBD4-206ENST00000507208 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.74■■□□□ 1.55
MBD4-206ENST00000507208 ACIN1Q9UKV3 1341 aaKnown RBP24.74■■□□□ 1.55
MBD4-206ENST00000507208 ATAD2BQ9ULI0 1458 aa24.68■■□□□ 1.54
MBD4-206ENST00000507208 PEG3Q9GZU2 1588 aa24.64■■□□□ 1.53
MBD4-206ENST00000507208 SOGA1O94964 1423 aa24.64■■□□□ 1.53
MBD4-206ENST00000507208 GOLGA3Q08378 1498 aa24.63■■□□□ 1.53
MBD4-206ENST00000507208 KIF21BO75037 1637 aa24.59■■□□□ 1.53
MBD4-206ENST00000507208 DIEXFQ68CQ4 756 aaKnown RBP24.59■■□□□ 1.53
MBD4-206ENST00000507208 NCAPD3P42695 1498 aa24.57■■□□□ 1.52
MBD4-206ENST00000507208 CENPBP07199 599 aaPredicted RBP24.56■■□□□ 1.52
MBD4-206ENST00000507208 NEUROD1Q13562 356 aa24.56■■□□□ 1.52
MBD4-206ENST00000507208 CSRNP3Q8WYN3 585 aa24.53■■□□□ 1.52
MBD4-206ENST00000507208 RUSC2Q8N2Y8 1516 aa24.48■■□□□ 1.51
MBD4-206ENST00000507208 BAZ1BQ9UIG0 1483 aaKnown RBP24.47■■□□□ 1.51
MBD4-206ENST00000507208 CEP164Q9UPV0 1460 aa24.47■■□□□ 1.51
MBD4-206ENST00000507208 HMGXB3Q12766 1538 aa24.45■■□□□ 1.5
MBD4-206ENST00000507208 SYNJ1O43426 1573 aa24.38■■□□□ 1.49
MBD4-206ENST00000507208 ZNF316A6NFI3 1004 aaPredicted RBP24.37■■□□□ 1.49
MBD4-206ENST00000507208 GTF3C3Q9Y5Q9 886 aa24.33■■□□□ 1.49
MBD4-206ENST00000507208 VPS8Q8N3P4 1428 aa24.3■■□□□ 1.48
MBD4-206ENST00000507208 UBTFP17480 764 aaKnown RBP24.29■■□□□ 1.48
MBD4-206ENST00000507208 CLIP1P30622 1438 aa24.26■■□□□ 1.47
MBD4-206ENST00000507208 MYT1Q01538 1121 aa24.25■■□□□ 1.47
MBD4-206ENST00000507208 TOP2BQ02880 1626 aa24.16■■□□□ 1.46
MBD4-206ENST00000507208 TTBK1Q5TCY1 1321 aaPredicted RBP24.15■■□□□ 1.46
MBD4-206ENST00000507208 BIVM-ERCC5R4GMW8 1640 aa24.15■■□□□ 1.46
MBD4-206ENST00000507208 ERICH3Q5RHP9 1530 aa24.12■■□□□ 1.45
MBD4-206ENST00000507208 CLSPNQ9HAW4 1339 aa24.1■■□□□ 1.45
MBD4-206ENST00000507208 RAPGEF2Q9Y4G8 1499 aa24.09■■□□□ 1.45
MBD4-206ENST00000507208 NESP48681 1621 aa24.06■■□□□ 1.44
MBD4-206ENST00000507208 PRXQ9BXM0 1461 aa23.96■■□□□ 1.43
MBD4-206ENST00000507208 MIER1Q8N108 512 aa23.96■■□□□ 1.43
MBD4-206ENST00000507208 HNRNPUL2Q1KMD3 747 aaKnown RBP23.94■■□□□ 1.42
MBD4-206ENST00000507208 CUX2O14529 1486 aa23.91■■□□□ 1.42
MBD4-206ENST00000507208 ARAP1Q96P48 1450 aa23.91■■□□□ 1.42
MBD4-206ENST00000507208 APLP2Q06481 763 aa23.91■■□□□ 1.42
MBD4-206ENST00000507208 CADPSQ9ULU8 1353 aa23.9■■□□□ 1.42
MBD4-206ENST00000507208 DHX57Q6P158 1386 aaKnown RBP23.86■■□□□ 1.41
MBD4-206ENST00000507208 RRBP1Q9P2E9 1410 aaKnown RBP23.86■■□□□ 1.41
MBD4-206ENST00000507208 LAMC3Q9Y6N6 1575 aa23.84■■□□□ 1.41
MBD4-206ENST00000507208 CFTRP13569 1480 aa23.82■■□□□ 1.4
MBD4-206ENST00000507208 YTHDC1Q96MU7 727 aaKnown RBP23.78■■□□□ 1.4
MBD4-206ENST00000507208 KIF21AQ7Z4S6 1674 aa23.73■■□□□ 1.39
MBD4-206ENST00000507208 PRDM2Q13029 1718 aa23.72■■□□□ 1.39
MBD4-206ENST00000507208 CUX1P39880 1505 aa23.72■■□□□ 1.39
MBD4-206ENST00000507208 ERCC6Q03468 1493 aa23.71■■□□□ 1.39
MBD4-206ENST00000507208 MAP3K1Q13233 1512 aa23.68■■□□□ 1.38
MBD4-206ENST00000507208 KIF27Q86VH2 1401 aa23.67■■□□□ 1.38
MBD4-206ENST00000507208 PDS5BQ9NTI5 1447 aa23.67■■□□□ 1.38
MBD4-206ENST00000507208 FANCD2Q9BXW9 1451 aa23.64■■□□□ 1.38
MBD4-206ENST00000507208 ARHGAP35Q9NRY4 1499 aa23.61■■□□□ 1.37
MBD4-206ENST00000507208 CCNB3Q8WWL7 1395 aa23.59■■□□□ 1.37
MBD4-206ENST00000507208 KANK4Q5T7N3 995 aaPredicted RBP23.56■■□□□ 1.36
MBD4-206ENST00000507208 TIAM1Q13009 1591 aa23.53■■□□□ 1.36
MBD4-206ENST00000507208 THOC2Q8NI27 1593 aaKnown RBP23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms