RNA–Protein interactions for RNA: ENST00000374078.5

ROMO1-204, Transcript of reactive oxygen species modulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ROMO1, Length 498 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROMO1-204ENST00000374078 NISCHQ9Y2I1 1504 aa43.53■■■■■ 4.56
ROMO1-204ENST00000374078 CCDC180Q9P1Z9 1646 aa38.76■■■■□ 3.8
ROMO1-204ENST00000374078 ABCC9O60706 1549 aa37.82■■■■□ 3.65
ROMO1-204ENST00000374078 RB1CC1Q8TDY2 1594 aa36.46■■■■□ 3.43
ROMO1-204ENST00000374078 DCAF8L2P0C7V8 631 aa36.42■■■■□ 3.42
ROMO1-204ENST00000374078 NACADO15069 1562 aa36.4■■■■□ 3.42
ROMO1-204ENST00000374078 ZCCHC6Q5VYS8 1495 aaKnown RBP36.28■■■■□ 3.4
ROMO1-204ENST00000374078 MYO15BQ96JP2 1530 aa36.16■■■■□ 3.38
ROMO1-204ENST00000374078 DCAF1Q9Y4B6 1507 aa36.03■■■■□ 3.36
ROMO1-204ENST00000374078 UNC13AQ9UPW8 1703 aa35.61■■■■□ 3.29
ROMO1-204ENST00000374078 SCRIBQ14160 1630 aa35.37■■■■□ 3.25
ROMO1-204ENST00000374078 PABPN1Q86U42 306 aaKnown RBP eCLIP35.32■■■■□ 3.24
ROMO1-204ENST00000374078 BICRAQ9NZM4 1560 aa35.25■■■■□ 3.23
ROMO1-204ENST00000374078 SHROOM4Q9ULL8 1493 aa34.97■■■■□ 3.19
ROMO1-204ENST00000374078 DNAJC5BQ9UF47 199 aa34.53■■■■□ 3.12
ROMO1-204ENST00000374078 EIF4G1Q04637 1599 aaKnown RBP34.37■■■■□ 3.09
ROMO1-204ENST00000374078 CC2D2AQ9P2K1 1620 aa34.23■■■■□ 3.07
ROMO1-204ENST00000374078 CECR2Q9BXF3 1484 aa34■■■■□ 3.03
ROMO1-204ENST00000374078 SMARCA4P51532 1647 aa33.8■■■■□ 3
ROMO1-204ENST00000374078 BAZ1AQ9NRL2 1556 aaPredicted RBP33.79■■■■□ 3
ROMO1-204ENST00000374078 SMARCA2P51531 1590 aa33.6■■■□□ 2.97
ROMO1-204ENST00000374078 ATAD2BQ9ULI0 1458 aa33.56■■■□□ 2.96
ROMO1-204ENST00000374078 MROH2BQ7Z745 1585 aa33.52■■■□□ 2.96
ROMO1-204ENST00000374078 NCAPD3P42695 1498 aa33.52■■■□□ 2.96
ROMO1-204ENST00000374078 PEG3Q9GZU2 1588 aa33.44■■■□□ 2.94
ROMO1-204ENST00000374078 HMGXB3Q12766 1538 aa33.43■■■□□ 2.94
ROMO1-204ENST00000374078 BAZ1BQ9UIG0 1483 aaKnown RBP33.37■■■□□ 2.93
ROMO1-204ENST00000374078 WIZO95785 1651 aa33.22■■■□□ 2.91
ROMO1-204ENST00000374078 RSF1Q96T23 1441 aaPredicted RBP33.16■■■□□ 2.9
ROMO1-204ENST00000374078 TOP2AP11388 1531 aaKnown RBP32.88■■■□□ 2.85
ROMO1-204ENST00000374078 NESP48681 1621 aa32.71■■■□□ 2.83
ROMO1-204ENST00000374078 LAMC3Q9Y6N6 1575 aa32.7■■■□□ 2.83
ROMO1-204ENST00000374078 ERCC6Q03468 1493 aa32.68■■■□□ 2.82
ROMO1-204ENST00000374078 CADPSQ9ULU8 1353 aa32.58■■■□□ 2.81
ROMO1-204ENST00000374078 PDS5BQ9NTI5 1447 aa32.5■■■□□ 2.79
ROMO1-204ENST00000374078 CCDC88BA6NC98 1476 aa32.45■■■□□ 2.79
ROMO1-204ENST00000374078 SUPT5HO00267 1087 aaKnown RBP32.43■■■□□ 2.78
ROMO1-204ENST00000374078 KIF21AQ7Z4S6 1674 aa32.4■■■□□ 2.78
ROMO1-204ENST00000374078 CFTRP13569 1480 aa32.38■■■□□ 2.77
ROMO1-204ENST00000374078 PRDM2Q13029 1718 aa32.27■■■□□ 2.76
ROMO1-204ENST00000374078 CUX2O14529 1486 aa32.26■■■□□ 2.75
ROMO1-204ENST00000374078 THOC2Q8NI27 1593 aaKnown RBP32.24■■■□□ 2.75
ROMO1-204ENST00000374078 FANCD2Q9BXW9 1451 aa32.23■■■□□ 2.75
ROMO1-204ENST00000374078 CEP164Q9UPV0 1460 aa32.22■■■□□ 2.75
ROMO1-204ENST00000374078 MRC2Q9UBG0 1479 aa32.14■■■□□ 2.74
ROMO1-204ENST00000374078 WDR62O43379 1518 aa32.02■■■□□ 2.72
ROMO1-204ENST00000374078 URB2Q14146 1524 aaKnown RBP31.87■■■□□ 2.69
ROMO1-204ENST00000374078 ABCC8Q09428 1581 aa31.76■■■□□ 2.67
ROMO1-204ENST00000374078 DNMBPQ6XZF7 1577 aa31.71■■■□□ 2.67
ROMO1-204ENST00000374078 TOPBP1Q92547 1522 aa31.7■■■□□ 2.67
ROMO1-204ENST00000374078 IFT140Q96RY7 1462 aa31.52■■■□□ 2.64
ROMO1-204ENST00000374078 CUX1P39880 1505 aa31.47■■■□□ 2.63
ROMO1-204ENST00000374078 POLA1P09884 1462 aaPredicted RBP31.44■■■□□ 2.62
ROMO1-204ENST00000374078 FGD5Q6ZNL6 1462 aa31.39■■■□□ 2.62
ROMO1-204ENST00000374078 TARBP1Q13395 1621 aaKnown RBP31.35■■■□□ 2.61
ROMO1-204ENST00000374078 WRNQ14191 1432 aaPredicted RBP eCLIP31.32■■■□□ 2.61
ROMO1-204ENST00000374078 ZNF608Q9ULD9 1512 aaPredicted RBP31.32■■■□□ 2.6
ROMO1-204ENST00000374078 SOGA1O94964 1423 aa31.32■■■□□ 2.6
ROMO1-204ENST00000374078 RAD54L2Q9Y4B4 1467 aa31.28■■■□□ 2.6
ROMO1-204ENST00000374078 EIF4G3O43432 1585 aaKnown RBP31.27■■■□□ 2.6
ROMO1-204ENST00000374078 TOP2BQ02880 1626 aa31.25■■■□□ 2.59
ROMO1-204ENST00000374078 BIVM-ERCC5R4GMW8 1640 aa31.25■■■□□ 2.59
ROMO1-204ENST00000374078 SYNJ1O43426 1573 aa31.23■■■□□ 2.59
ROMO1-204ENST00000374078 WDR97A6NE52 1622 aa31.17■■■□□ 2.58
ROMO1-204ENST00000374078 AQRO60306 1485 aaKnown RBP eCLIP31.15■■■□□ 2.581e-6■■■■■ 32.7
ROMO1-204ENST00000374078 DNAJC5Q9H3Z4 198 aa31.14■■■□□ 2.58
ROMO1-204ENST00000374078 TDRD9Q8NDG6 1382 aaKnown RBP31.12■■■□□ 2.57
ROMO1-204ENST00000374078 ABCA10Q8WWZ4 1543 aa31.07■■■□□ 2.56
ROMO1-204ENST00000374078 GAPVD1Q14C86 1478 aa30.98■■■□□ 2.55
ROMO1-204ENST00000374078 GRIN2BQ13224 1484 aa30.97■■■□□ 2.55
ROMO1-204ENST00000374078 ABCA5Q8WWZ7 1642 aa30.96■■■□□ 2.55
ROMO1-204ENST00000374078 PBRM1Q86U86 1689 aa30.96■■■□□ 2.55
ROMO1-204ENST00000374078 OSCARQ8IYS5 282 aa30.93■■■□□ 2.54
ROMO1-204ENST00000374078 SNAPC4Q5SXM2 1469 aa30.91■■■□□ 2.54
ROMO1-204ENST00000374078 MAGI1Q96QZ7 1491 aaPredicted RBP30.89■■■□□ 2.54
ROMO1-204ENST00000374078 CHD1O14646 1710 aa30.89■■■□□ 2.54
ROMO1-204ENST00000374078 FBLN2P98095 1184 aa30.86■■■□□ 2.53
ROMO1-204ENST00000374078 CHMP7Q8WUX9 453 aaPredicted RBP30.77■■■□□ 2.52
ROMO1-204ENST00000374078 SYNJ2O15056 1496 aa30.76■■■□□ 2.52
ROMO1-204ENST00000374078 ERICH3Q5RHP9 1530 aa30.73■■■□□ 2.51
ROMO1-204ENST00000374078 KIF27Q86VH2 1401 aa30.69■■■□□ 2.5
ROMO1-204ENST00000374078 ADAMTS12P58397 1594 aa30.67■■■□□ 2.5
ROMO1-204ENST00000374078 TRIM41Q8WV44 630 aa30.66■■■□□ 2.5
ROMO1-204ENST00000374078 FHAD1B1AJZ9 1412 aa30.62■■■□□ 2.49
ROMO1-204ENST00000374078 GRIN2AQ12879 1464 aa30.56■■■□□ 2.48
ROMO1-204ENST00000374078 CUL7Q14999 1698 aa30.52■■■□□ 2.48
ROMO1-204ENST00000374078 CLASP1Q7Z460 1538 aa30.48■■■□□ 2.47
ROMO1-204ENST00000374078 IGF1RP08069 1367 aa30.47■■■□□ 2.47
ROMO1-204ENST00000374078 RIMBP3CA6NJZ7 1639 aa30.43■■■□□ 2.46
ROMO1-204ENST00000374078 RIMBP3BA6NNM3 1639 aa30.43■■■□□ 2.46
ROMO1-204ENST00000374078 RIMBP3Q9UFD9 1639 aa30.43■■■□□ 2.46
ROMO1-204ENST00000374078 ARHGEF11O15085 1522 aa30.42■■■□□ 2.46
ROMO1-204ENST00000374078 CEP170Q5SW79 1584 aa30.39■■■□□ 2.46
ROMO1-204ENST00000374078 NUP160Q12769 1436 aa30.39■■■□□ 2.45
ROMO1-204ENST00000374078 CARMIL1Q5VZK9 1371 aa30.34■■■□□ 2.45
ROMO1-204ENST00000374078 RUSC2Q8N2Y8 1516 aa30.32■■■□□ 2.44
ROMO1-204ENST00000374078 CHIC1Q5VXU3 224 aa30.22■■■□□ 2.43
ROMO1-204ENST00000374078 RAPGEF2Q9Y4G8 1499 aa30.19■■■□□ 2.42
ROMO1-204ENST00000374078 SHROOM2Q13796 1616 aa30.18■■■□□ 2.42
ROMO1-204ENST00000374078 ARAP1Q96P48 1450 aa30.15■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms