RNA–Protein interactions for RNA: ENST00000542155.5

GTDC1-219, Transcript of glycosyltransferase like domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GTDC1, Length 2,677 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-219ENST00000542155 NISCHQ9Y2I1 1504 aa40.07■■■■■ 4.01
GTDC1-219ENST00000542155 CCDC180Q9P1Z9 1646 aa35.05■■■■□ 3.2
GTDC1-219ENST00000542155 ABCC9O60706 1549 aa33.67■■■□□ 2.98
GTDC1-219ENST00000542155 ZCCHC6Q5VYS8 1495 aaKnown RBP33.56■■■□□ 2.96
GTDC1-219ENST00000542155 DCAF8L2P0C7V8 631 aa33.31■■■□□ 2.92
GTDC1-219ENST00000542155 DCAF1Q9Y4B6 1507 aa33.06■■■□□ 2.88
GTDC1-219ENST00000542155 MYO15BQ96JP2 1530 aa32.81■■■□□ 2.84
GTDC1-219ENST00000542155 NACADO15069 1562 aa32.77■■■□□ 2.84
GTDC1-219ENST00000542155 RB1CC1Q8TDY2 1594 aa32.59■■■□□ 2.81
GTDC1-219ENST00000542155 SHROOM4Q9ULL8 1493 aa32.5■■■□□ 2.79
GTDC1-219ENST00000542155 SCRIBQ14160 1630 aa32.28■■■□□ 2.76
GTDC1-219ENST00000542155 UNC13AQ9UPW8 1703 aa32.02■■■□□ 2.72
GTDC1-219ENST00000542155 BICRAQ9NZM4 1560 aa31.73■■■□□ 2.67
GTDC1-219ENST00000542155 PABPN1Q86U42 306 aaKnown RBP eCLIP31.72■■■□□ 2.67
GTDC1-219ENST00000542155 CECR2Q9BXF3 1484 aa31.26■■■□□ 2.59
GTDC1-219ENST00000542155 SUPT5HO00267 1087 aaKnown RBP31.03■■■□□ 2.56
GTDC1-219ENST00000542155 MROH2BQ7Z745 1585 aa31■■■□□ 2.55
GTDC1-219ENST00000542155 RSF1Q96T23 1441 aaPredicted RBP30.96■■■□□ 2.55
GTDC1-219ENST00000542155 BAZ1AQ9NRL2 1556 aaPredicted RBP30.92■■■□□ 2.54
GTDC1-219ENST00000542155 SMARCA4P51532 1647 aa30.88■■■□□ 2.53
GTDC1-219ENST00000542155 EIF4G1Q04637 1599 aaKnown RBP30.76■■■□□ 2.51
GTDC1-219ENST00000542155 WIZO95785 1651 aa30.72■■■□□ 2.51
GTDC1-219ENST00000542155 ATAD2BQ9ULI0 1458 aa30.51■■■□□ 2.47
GTDC1-219ENST00000542155 PEG3Q9GZU2 1588 aa30.5■■■□□ 2.47
GTDC1-219ENST00000542155 CC2D2AQ9P2K1 1620 aa30.43■■■□□ 2.46
GTDC1-219ENST00000542155 SMARCA2P51531 1590 aa30.4■■■□□ 2.46
GTDC1-219ENST00000542155 TOP2AP11388 1531 aaKnown RBP30.31■■■□□ 2.44
GTDC1-219ENST00000542155 NCAPD3P42695 1498 aa30.29■■■□□ 2.44
GTDC1-219ENST00000542155 BAZ1BQ9UIG0 1483 aaKnown RBP30.27■■■□□ 2.44
GTDC1-219ENST00000542155 DNAJC5BQ9UF47 199 aa30.21■■■□□ 2.43
GTDC1-219ENST00000542155 HMGXB3Q12766 1538 aa30.17■■■□□ 2.42
GTDC1-219ENST00000542155 CCDC88BA6NC98 1476 aa30.06■■■□□ 2.4
GTDC1-219ENST00000542155 CFTRP13569 1480 aa29.51■■■□□ 2.31
GTDC1-219ENST00000542155 CADPSQ9ULU8 1353 aa29.5■■■□□ 2.31
GTDC1-219ENST00000542155 CHIC1Q5VXU3 224 aa29.47■■■□□ 2.31
GTDC1-219ENST00000542155 NESP48681 1621 aa29.47■■■□□ 2.31
GTDC1-219ENST00000542155 ABCC8Q09428 1581 aa29.32■■■□□ 2.28
GTDC1-219ENST00000542155 LAMC3Q9Y6N6 1575 aa29.29■■■□□ 2.28
GTDC1-219ENST00000542155 PRDM2Q13029 1718 aa29.27■■■□□ 2.28
GTDC1-219ENST00000542155 FANCD2Q9BXW9 1451 aa29.17■■■□□ 2.26
GTDC1-219ENST00000542155 TRIM41Q8WV44 630 aa29.14■■■□□ 2.26
GTDC1-219ENST00000542155 WRNQ14191 1432 aaPredicted RBP eCLIP29.11■■■□□ 2.25
GTDC1-219ENST00000542155 PDS5BQ9NTI5 1447 aa29.08■■■□□ 2.25
GTDC1-219ENST00000542155 SYNJ1O43426 1573 aa29.05■■■□□ 2.24
GTDC1-219ENST00000542155 KIF21AQ7Z4S6 1674 aa29.05■■■□□ 2.24
GTDC1-219ENST00000542155 CUX1P39880 1505 aa28.99■■■□□ 2.23
GTDC1-219ENST00000542155 CEP164Q9UPV0 1460 aa28.99■■■□□ 2.23
GTDC1-219ENST00000542155 TOP2BQ02880 1626 aa28.91■■■□□ 2.22
GTDC1-219ENST00000542155 BIVM-ERCC5R4GMW8 1640 aa28.88■■■□□ 2.21
GTDC1-219ENST00000542155 URB2Q14146 1524 aaKnown RBP28.87■■■□□ 2.21
GTDC1-219ENST00000542155 ERCC6Q03468 1493 aa28.83■■■□□ 2.21
GTDC1-219ENST00000542155 TOPBP1Q92547 1522 aa28.82■■■□□ 2.2
GTDC1-219ENST00000542155 DNMBPQ6XZF7 1577 aa28.8■■■□□ 2.2
GTDC1-219ENST00000542155 MRC2Q9UBG0 1479 aa28.75■■■□□ 2.19
GTDC1-219ENST00000542155 FGD5Q6ZNL6 1462 aa28.72■■■□□ 2.19
GTDC1-219ENST00000542155 SOGA1O94964 1423 aa28.69■■■□□ 2.18
GTDC1-219ENST00000542155 FAM9AQ8IZU1 332 aaPredicted RBP28.68■■■□□ 2.18
GTDC1-219ENST00000542155 THOC2Q8NI27 1593 aaKnown RBP28.66■■■□□ 2.18
GTDC1-219ENST00000542155 POLA1P09884 1462 aaPredicted RBP28.65■■■□□ 2.18
GTDC1-219ENST00000542155 RUSC2Q8N2Y8 1516 aa28.65■■■□□ 2.18
GTDC1-219ENST00000542155 WDR62O43379 1518 aa28.62■■■□□ 2.17
GTDC1-219ENST00000542155 RAD54L2Q9Y4B4 1467 aa28.61■■■□□ 2.17
GTDC1-219ENST00000542155 CUX2O14529 1486 aa28.51■■■□□ 2.15
GTDC1-219ENST00000542155 TARBP1Q13395 1621 aaKnown RBP28.43■■■□□ 2.14
GTDC1-219ENST00000542155 ABCA10Q8WWZ4 1543 aa28.42■■■□□ 2.14
GTDC1-219ENST00000542155 LOC105371045A0A1W2PR82 267 aa28.4■■■□□ 2.14
GTDC1-219ENST00000542155 WDR97A6NE52 1622 aa28.38■■■□□ 2.13
GTDC1-219ENST00000542155 KIF27Q86VH2 1401 aa28.38■■■□□ 2.13
GTDC1-219ENST00000542155 CSRNP3Q8WYN3 585 aa28.37■■■□□ 2.13
GTDC1-219ENST00000542155 EEA1Q15075 1411 aa28.36■■■□□ 2.13
GTDC1-219ENST00000542155 TDRD9Q8NDG6 1382 aaKnown RBP28.36■■■□□ 2.13
GTDC1-219ENST00000542155 EHMT2Q96KQ7 1210 aa28.35■■■□□ 2.13
GTDC1-219ENST00000542155 IFT140Q96RY7 1462 aa28.32■■■□□ 2.12
GTDC1-219ENST00000542155 ZNF608Q9ULD9 1512 aaPredicted RBP28.29■■■□□ 2.12
GTDC1-219ENST00000542155 AQRO60306 1485 aaKnown RBP eCLIP28.26■■■□□ 2.11
GTDC1-219ENST00000542155 IGF1RP08069 1367 aa28.26■■■□□ 2.11
GTDC1-219ENST00000542155 ABCA5Q8WWZ7 1642 aa28.24■■■□□ 2.11
GTDC1-219ENST00000542155 GAPVD1Q14C86 1478 aa28.21■■■□□ 2.11
GTDC1-219ENST00000542155 PRXQ9BXM0 1461 aa28.13■■■□□ 2.09
GTDC1-219ENST00000542155 EIF4G3O43432 1585 aaKnown RBP28.11■■■□□ 2.09
GTDC1-219ENST00000542155 RAPGEF2Q9Y4G8 1499 aa28.1■■■□□ 2.09
GTDC1-219ENST00000542155 KIF21BO75037 1637 aa28.08■■■□□ 2.09
GTDC1-219ENST00000542155 CARMIL1Q5VZK9 1371 aa28.07■■■□□ 2.08
GTDC1-219ENST00000542155 PBRM1Q86U86 1689 aa28.07■■■□□ 2.08
GTDC1-219ENST00000542155 ERICH3Q5RHP9 1530 aa28.06■■■□□ 2.08
GTDC1-219ENST00000542155 GRIN2BQ13224 1484 aa28.03■■■□□ 2.08
GTDC1-219ENST00000542155 GOLGA3Q08378 1498 aa28.01■■■□□ 2.07
GTDC1-219ENST00000542155 UBTFP17480 764 aaKnown RBP27.97■■■□□ 2.07
GTDC1-219ENST00000542155 CUL7Q14999 1698 aa27.96■■■□□ 2.07
GTDC1-219ENST00000542155 SNAPC4Q5SXM2 1469 aa27.93■■■□□ 2.06
GTDC1-219ENST00000542155 ADAMTS12P58397 1594 aa27.89■■■□□ 2.06
GTDC1-219ENST00000542155 FHAD1B1AJZ9 1412 aa27.87■■■□□ 2.05
GTDC1-219ENST00000542155 TNIKQ9UKE5 1360 aa27.87■■■□□ 2.05
GTDC1-219ENST00000542155 MAGI1Q96QZ7 1491 aaPredicted RBP27.82■■■□□ 2.04
GTDC1-219ENST00000542155 FBLN2P98095 1184 aa27.75■■■□□ 2.03
GTDC1-219ENST00000542155 SYNJ2O15056 1496 aa27.74■■■□□ 2.03
GTDC1-219ENST00000542155 RANGAP1P46060 587 aaPredicted RBP27.74■■■□□ 2.03
GTDC1-219ENST00000542155 CHMP7Q8WUX9 453 aaPredicted RBP27.73■■■□□ 2.03
GTDC1-219ENST00000542155 CEP162Q5TB80 1403 aa27.71■■■□□ 2.03
GTDC1-219ENST00000542155 GRIN2AQ12879 1464 aa27.71■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms