RNA–Protein interactions for RNA: ENST00000336273.7

MTDH-201, Transcript of metadherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTDH, Length 6,177 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTDH-201ENST00000336273 DCAF8L2P0C7V8 631 aa28.4■■■□□ 2.14
MTDH-201ENST00000336273 SUPT5HO00267 1087 aaKnown RBP27.23■■□□□ 1.95
MTDH-201ENST00000336273 NISCHQ9Y2I1 1504 aa27.22■■□□□ 1.95
MTDH-201ENST00000336273 EHMT2Q96KQ7 1210 aa26.79■■□□□ 1.88
MTDH-201ENST00000336273 SHROOM4Q9ULL8 1493 aa26.72■■□□□ 1.87
MTDH-201ENST00000336273 PELP1Q8IZL8 1130 aaKnown RBP26.42■■□□□ 1.82
MTDH-201ENST00000336273 TTBK1Q5TCY1 1321 aaPredicted RBP25.93■■□□□ 1.74
MTDH-201ENST00000336273 APLP2Q06481 763 aa25.9■■□□□ 1.74
MTDH-201ENST00000336273 PCGF6Q9BYE7 350 aa25.84■■□□□ 1.73
MTDH-201ENST00000336273 FAM9AQ8IZU1 332 aaPredicted RBP25.81■■□□□ 1.72
MTDH-201ENST00000336273 ERICH6Q7L0X2 663 aa25.59■■□□□ 1.69
MTDH-201ENST00000336273 CENPBP07199 599 aaPredicted RBP25.47■■□□□ 1.67
MTDH-201ENST00000336273 RANGAP1P46060 587 aaPredicted RBP25.42■■□□□ 1.66
MTDH-201ENST00000336273 CCER1Q8TC90 406 aaPredicted RBP25.34■■□□□ 1.65
MTDH-201ENST00000336273 ZEB1P37275 1124 aaPredicted RBP25.26■■□□□ 1.63
MTDH-201ENST00000336273 YTHDC1Q96MU7 727 aaKnown RBP25.2■■□□□ 1.62
MTDH-201ENST00000336273 ATP1B4Q9UN42 357 aaPredicted RBP25.1■■□□□ 1.61
MTDH-201ENST00000336273 TRIM41Q8WV44 630 aa25.07■■□□□ 1.6
MTDH-201ENST00000336273 NEFLP07196 543 aa24.93■■□□□ 1.58
MTDH-201ENST00000336273 PPARGC1BQ86YN6 1023 aaKnown RBP24.88■■□□□ 1.57
MTDH-201ENST00000336273 UBTFP17480 764 aaKnown RBP24.86■■□□□ 1.57
MTDH-201ENST00000336273 MYT1Q01538 1121 aa24.77■■□□□ 1.56
MTDH-201ENST00000336273 TRIM26Q12899 539 aaPredicted RBP24.51■■□□□ 1.51
MTDH-201ENST00000336273 HRCP23327 699 aa24.41■■□□□ 1.5
MTDH-201ENST00000336273 ITGAEP38570 1179 aa24.33■■□□□ 1.49
MTDH-201ENST00000336273 POLR3GLQ9BT43 218 aa24.33■■□□□ 1.49
MTDH-201ENST00000336273 DAXXQ9UER7 740 aaPredicted RBP24.31■■□□□ 1.48
MTDH-201ENST00000336273 LOC105371045A0A1W2PR82 267 aa24.21■■□□□ 1.47
MTDH-201ENST00000336273 CNGB1Q14028 1251 aaPredicted RBP24.21■■□□□ 1.47
MTDH-201ENST00000336273 HNRNPUL2Q1KMD3 747 aaKnown RBP24.14■■□□□ 1.45
MTDH-201ENST00000336273 MYT1LQ9UL68 1186 aa24.01■■□□□ 1.43
MTDH-201ENST00000336273 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24■■□□□ 1.43
MTDH-201ENST00000336273 DIEXFQ68CQ4 756 aaKnown RBP23.89■■□□□ 1.42
MTDH-201ENST00000336273 CHIC1Q5VXU3 224 aa23.87■■□□□ 1.41
MTDH-201ENST00000336273 ZNF316A6NFI3 1004 aaPredicted RBP23.81■■□□□ 1.4
MTDH-201ENST00000336273 RTL5Q5HYW3 569 aaPredicted RBP23.8■■□□□ 1.4
MTDH-201ENST00000336273 SLC4A1APQ9BWU0 796 aaKnown RBP23.78■■□□□ 1.4
MTDH-201ENST00000336273 BCANQ96GW7 911 aa23.72■■□□□ 1.39
MTDH-201ENST00000336273 CLSPNQ9HAW4 1339 aa23.71■■□□□ 1.39
MTDH-201ENST00000336273 GTF3C3Q9Y5Q9 886 aa23.62■■□□□ 1.37
MTDH-201ENST00000336273 ABCC9O60706 1549 aa23.61■■□□□ 1.37
MTDH-201ENST00000336273 FAM50AQ14320 339 aaKnown RBP23.59■■□□□ 1.37
MTDH-201ENST00000336273 NEUROD1Q13562 356 aa23.56■■□□□ 1.36
MTDH-201ENST00000336273 PABPN1Q86U42 306 aaKnown RBP eCLIP23.49■■□□□ 1.35
MTDH-201ENST00000336273 TRIM52Q96A61 297 aa23.47■■□□□ 1.35
MTDH-201ENST00000336273 CDK11AQ9UQ88 783 aaPredicted RBP23.37■■□□□ 1.33
MTDH-201ENST00000336273 ANP32CO43423 234 aa23.33■■□□□ 1.33
MTDH-201ENST00000336273 ZNF326Q5BKZ1 582 aaKnown RBP23.3■■□□□ 1.32
MTDH-201ENST00000336273 BCL11AQ9H165 835 aa23.2■■□□□ 1.3
MTDH-201ENST00000336273 ACIN1Q9UKV3 1341 aaKnown RBP23.13■■□□□ 1.29
MTDH-201ENST00000336273 CANXP27824 592 aaKnown RBP23.09■■□□□ 1.29
MTDH-201ENST00000336273 ZBTB47Q9UFB7 747 aaPredicted RBP23.09■■□□□ 1.29
MTDH-201ENST00000336273 NPM2Q86SE8 214 aaKnown RBP23.04■■□□□ 1.28
MTDH-201ENST00000336273 SLC24A1O60721 1099 aa23■■□□□ 1.27
MTDH-201ENST00000336273 ANP32AP39687 249 aaKnown RBP22.98■■□□□ 1.27
MTDH-201ENST00000336273 FBLN2P98095 1184 aa22.92■■□□□ 1.26
MTDH-201ENST00000336273 ARID3CA6NKF2 412 aa22.88■■□□□ 1.25
MTDH-201ENST00000336273 FKBP8Q14318 412 aa22.87■■□□□ 1.25
MTDH-201ENST00000336273 P3H3Q8IVL6 736 aa22.87■■□□□ 1.25
MTDH-201ENST00000336273 EIF5BO60841 1220 aaKnown RBP22.79■■□□□ 1.24
MTDH-201ENST00000336273 NEFMP07197 916 aa22.72■■□□□ 1.23
MTDH-201ENST00000336273 ZNF777Q9ULD5 760 aaPredicted RBP22.68■■□□□ 1.22
MTDH-201ENST00000336273 CSRNP3Q8WYN3 585 aa22.67■■□□□ 1.22
MTDH-201ENST00000336273 NBR1Q14596 966 aa22.64■■□□□ 1.21
MTDH-201ENST00000336273 FAM9BQ8IZU0 186 aa22.63■■□□□ 1.21
MTDH-201ENST00000336273 HNRNPUQ00839 825 aaKnown RBP eCLIP22.63■■□□□ 1.21
MTDH-201ENST00000336273 SCRIBQ14160 1630 aa22.62■■□□□ 1.21
MTDH-201ENST00000336273 SALL2Q9Y467 1007 aaPredicted RBP22.59■■□□□ 1.21
MTDH-201ENST00000336273 DDX10Q13206 875 aaKnown RBP22.59■■□□□ 1.21
MTDH-201ENST00000336273 ANP32BQ92688 251 aaKnown RBP22.58■■□□□ 1.21
MTDH-201ENST00000336273 HSP90AA1P07900 732 aaKnown RBP22.58■■□□□ 1.2
MTDH-201ENST00000336273 TONSLQ96HA7 1378 aa22.53■■□□□ 1.2
MTDH-201ENST00000336273 ARXQ96QS3 562 aa22.51■■□□□ 1.19
MTDH-201ENST00000336273 ZCCHC6Q5VYS8 1495 aaKnown RBP22.49■■□□□ 1.19
MTDH-201ENST00000336273 SCAF1Q9H7N4 1312 aaKnown RBP22.47■■□□□ 1.19
MTDH-201ENST00000336273 UPF2Q9HAU5 1272 aaKnown RBP22.46■■□□□ 1.19
MTDH-201ENST00000336273 IRX6P78412 446 aaPredicted RBP22.45■■□□□ 1.18
MTDH-201ENST00000336273 CCDC136Q96JN2 1154 aa22.42■■□□□ 1.18
MTDH-201ENST00000336273 CHGAP10645 457 aaKnown RBP22.4■■□□□ 1.18
MTDH-201ENST00000336273 DCAF1Q9Y4B6 1507 aa22.38■■□□□ 1.17
MTDH-201ENST00000336273 MIER1Q8N108 512 aa22.33■■□□□ 1.17
MTDH-201ENST00000336273 TMC1Q8TDI8 760 aa22.32■■□□□ 1.16
MTDH-201ENST00000336273 CHIC2Q9UKJ5 165 aa22.32■■□□□ 1.16
MTDH-201ENST00000336273 GLIPR1L2Q4G1C9 344 aa22.31■■□□□ 1.16
MTDH-201ENST00000336273 HIRIP3Q9BW71 556 aaPredicted RBP22.3■■□□□ 1.16
MTDH-201ENST00000336273 CCDC180Q9P1Z9 1646 aa22.28■■□□□ 1.16
MTDH-201ENST00000336273 PLPPR3Q6T4P5 718 aa22.27■■□□□ 1.16
MTDH-201ENST00000336273 MRS2Q9HD23 443 aa22.25■■□□□ 1.15
MTDH-201ENST00000336273 STAG3Q9UJ98 1225 aa22.25■■□□□ 1.15
MTDH-201ENST00000336273 WDR43Q15061 677 aaKnown RBP eCLIP22.24■■□□□ 1.15
MTDH-201ENST00000336273 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.23■■□□□ 1.152e-7■■■□□ 16.1
MTDH-201ENST00000336273 NPM1P06748 294 aaKnown RBP eCLIP22.23■■□□□ 1.15
MTDH-201ENST00000336273 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.23■■□□□ 1.15
MTDH-201ENST00000336273 ESF1Q9H501 851 aaKnown RBP22.22■■□□□ 1.15
MTDH-201ENST00000336273 KDM2AQ9Y2K7 1162 aa22.21■■□□□ 1.15
MTDH-201ENST00000336273 RB1CC1Q8TDY2 1594 aa22.1■■□□□ 1.13
MTDH-201ENST00000336273 SENP3-EIF4A1A0A087X0R7 540 aa22.09■■□□□ 1.13
MTDH-201ENST00000336273 SENP3Q9H4L4 574 aaPredicted RBP22.03■■□□□ 1.12
MTDH-201ENST00000336273 CHMP7Q8WUX9 453 aaPredicted RBP22.02■■□□□ 1.12
MTDH-201ENST00000336273 DDRGK1Q96HY6 314 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms