RNA–Protein interactions for RNA: ENST00000492989.1

KHDRBS1-204, Transcript of KH RNA binding domain containing, signal transduction associated 1, humanhuman

TSL 1 (best) BASIC

Gene KHDRBS1, Length 1,215 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHDRBS1-204ENST00000492989 NISCHQ9Y2I1 1504 aa50.59■■■■■ 5.69
KHDRBS1-204ENST00000492989 ABCC9O60706 1549 aa46.04■■■■■ 4.96
KHDRBS1-204ENST00000492989 CCDC180Q9P1Z9 1646 aa45.63■■■■■ 4.89
KHDRBS1-204ENST00000492989 DNAJC5BQ9UF47 199 aa43.62■■■■■ 4.57
KHDRBS1-204ENST00000492989 RB1CC1Q8TDY2 1594 aa43.62■■■■■ 4.57
KHDRBS1-204ENST00000492989 NACADO15069 1562 aa43.21■■■■■ 4.51
KHDRBS1-204ENST00000492989 DCAF8L2P0C7V8 631 aa42.84■■■■■ 4.45
KHDRBS1-204ENST00000492989 PABPN1Q86U42 306 aaKnown RBP eCLIP42.78■■■■■ 4.44
KHDRBS1-204ENST00000492989 UNC13AQ9UPW8 1703 aa42.73■■■■■ 4.43
KHDRBS1-204ENST00000492989 MYO15BQ96JP2 1530 aa42.46■■■■■ 4.39
KHDRBS1-204ENST00000492989 BICRAQ9NZM4 1560 aa42.42■■■■■ 4.38
KHDRBS1-204ENST00000492989 ZCCHC6Q5VYS8 1495 aaKnown RBP41.84■■■■■ 4.29
KHDRBS1-204ENST00000492989 DCAF1Q9Y4B6 1507 aa41.76■■■■■ 4.28
KHDRBS1-204ENST00000492989 SHROOM4Q9ULL8 1493 aa41.73■■■■■ 4.27
KHDRBS1-204ENST00000492989 CC2D2AQ9P2K1 1620 aa41.59■■■■■ 4.25
KHDRBS1-204ENST00000492989 SCRIBQ14160 1630 aa41.53■■■■■ 4.24
KHDRBS1-204ENST00000492989 CECR2Q9BXF3 1484 aa41.52■■■■■ 4.24
KHDRBS1-204ENST00000492989 EIF4G1Q04637 1599 aaKnown RBP41.38■■■■■ 4.22
KHDRBS1-204ENST00000492989 DNAJC5Q9H3Z4 198 aa40.36■■■■■ 4.05
KHDRBS1-204ENST00000492989 NCAPD3P42695 1498 aa39.9■■■■□ 3.98
KHDRBS1-204ENST00000492989 CUX2O14529 1486 aa39.86■■■■□ 3.97
KHDRBS1-204ENST00000492989 ERCC6Q03468 1493 aa39.75■■■■□ 3.95
KHDRBS1-204ENST00000492989 ATAD2BQ9ULI0 1458 aa39.71■■■■□ 3.95
KHDRBS1-204ENST00000492989 SMARCA4P51532 1647 aa39.58■■■■□ 3.93
KHDRBS1-204ENST00000492989 HMGXB3Q12766 1538 aa39.57■■■■□ 3.93
KHDRBS1-204ENST00000492989 SMARCA2P51531 1590 aa39.57■■■■□ 3.92
KHDRBS1-204ENST00000492989 NESP48681 1621 aa39.44■■■■□ 3.9
KHDRBS1-204ENST00000492989 BAZ1AQ9NRL2 1556 aaPredicted RBP39.29■■■■□ 3.88
KHDRBS1-204ENST00000492989 BAZ1BQ9UIG0 1483 aaKnown RBP39.29■■■■□ 3.88
KHDRBS1-204ENST00000492989 PEG3Q9GZU2 1588 aa39.21■■■■□ 3.87
KHDRBS1-204ENST00000492989 THOC2Q8NI27 1593 aaKnown RBP39.15■■■■□ 3.86
KHDRBS1-204ENST00000492989 LAMC3Q9Y6N6 1575 aa39.08■■■■□ 3.85
KHDRBS1-204ENST00000492989 MROH2BQ7Z745 1585 aa38.99■■■■□ 3.83
KHDRBS1-204ENST00000492989 KIF21AQ7Z4S6 1674 aa38.96■■■■□ 3.83
KHDRBS1-204ENST00000492989 PDS5BQ9NTI5 1447 aa38.83■■■■□ 3.81
KHDRBS1-204ENST00000492989 CADPSQ9ULU8 1353 aa38.65■■■■□ 3.78
KHDRBS1-204ENST00000492989 MRC2Q9UBG0 1479 aa38.54■■■■□ 3.76
KHDRBS1-204ENST00000492989 WIZO95785 1651 aa38.52■■■■□ 3.76
KHDRBS1-204ENST00000492989 WDR62O43379 1518 aa38.48■■■■□ 3.75
KHDRBS1-204ENST00000492989 TRIM41Q8WV44 630 aa38.38■■■■□ 3.73
KHDRBS1-204ENST00000492989 CEP164Q9UPV0 1460 aa38.29■■■■□ 3.72
KHDRBS1-204ENST00000492989 FANCD2Q9BXW9 1451 aa38.22■■■■□ 3.71
KHDRBS1-204ENST00000492989 CFTRP13569 1480 aa38.13■■■■□ 3.69
KHDRBS1-204ENST00000492989 RSF1Q96T23 1441 aaPredicted RBP38■■■■□ 3.67
KHDRBS1-204ENST00000492989 TOP2AP11388 1531 aaKnown RBP37.97■■■■□ 3.67
KHDRBS1-204ENST00000492989 URB2Q14146 1524 aaKnown RBP37.97■■■■□ 3.67
KHDRBS1-204ENST00000492989 OSCARQ8IYS5 282 aa37.94■■■■□ 3.66
KHDRBS1-204ENST00000492989 PRDM2Q13029 1718 aa37.77■■■■□ 3.64
KHDRBS1-204ENST00000492989 ZNF608Q9ULD9 1512 aaPredicted RBP37.56■■■■□ 3.6
KHDRBS1-204ENST00000492989 RIMBP3CA6NJZ7 1639 aa37.56■■■■□ 3.6
KHDRBS1-204ENST00000492989 RIMBP3BA6NNM3 1639 aa37.56■■■■□ 3.6
KHDRBS1-204ENST00000492989 RIMBP3Q9UFD9 1639 aa37.56■■■■□ 3.6
KHDRBS1-204ENST00000492989 CCDC88BA6NC98 1476 aa37.55■■■■□ 3.6
KHDRBS1-204ENST00000492989 IFT140Q96RY7 1462 aa37.55■■■■□ 3.6
KHDRBS1-204ENST00000492989 TOPBP1Q92547 1522 aa37.46■■■■□ 3.59
KHDRBS1-204ENST00000492989 ARHGEF11O15085 1522 aa37.37■■■■□ 3.57
KHDRBS1-204ENST00000492989 EIF4G3O43432 1585 aaKnown RBP37.34■■■■□ 3.57
KHDRBS1-204ENST00000492989 ABCC8Q09428 1581 aa37.32■■■■□ 3.56
KHDRBS1-204ENST00000492989 DNMBPQ6XZF7 1577 aa37.28■■■■□ 3.56
KHDRBS1-204ENST00000492989 TARBP1Q13395 1621 aaKnown RBP37.19■■■■□ 3.54
KHDRBS1-204ENST00000492989 CHD1O14646 1710 aa37.18■■■■□ 3.54
KHDRBS1-204ENST00000492989 AQRO60306 1485 aaKnown RBP eCLIP37.15■■■■□ 3.546e-7■■■■□ 24.5
KHDRBS1-204ENST00000492989 CYB5RLQ6IPT4 315 aa37.09■■■■□ 3.53
KHDRBS1-204ENST00000492989 POLA1P09884 1462 aaPredicted RBP37.05■■■■□ 3.52
KHDRBS1-204ENST00000492989 ARAP1Q96P48 1450 aa36.98■■■■□ 3.51
KHDRBS1-204ENST00000492989 FBLN2P98095 1184 aa36.96■■■■□ 3.51
KHDRBS1-204ENST00000492989 RAD54L2Q9Y4B4 1467 aa36.93■■■■□ 3.5
KHDRBS1-204ENST00000492989 TDRD9Q8NDG6 1382 aaKnown RBP36.85■■■■□ 3.49
KHDRBS1-204ENST00000492989 SOGA1O94964 1423 aa36.85■■■■□ 3.49
KHDRBS1-204ENST00000492989 TRHP20396 242 aaPredicted RBP36.81■■■■□ 3.48
KHDRBS1-204ENST00000492989 SNAPC4Q5SXM2 1469 aa36.75■■■■□ 3.47
KHDRBS1-204ENST00000492989 FGD5Q6ZNL6 1462 aa36.75■■■■□ 3.47
KHDRBS1-204ENST00000492989 WDR97A6NE52 1622 aa36.74■■■■□ 3.47
KHDRBS1-204ENST00000492989 CLASP1Q7Z460 1538 aa36.72■■■■□ 3.47
KHDRBS1-204ENST00000492989 CUX1P39880 1505 aa36.65■■■■□ 3.46
KHDRBS1-204ENST00000492989 MAGI1Q96QZ7 1491 aaPredicted RBP36.63■■■■□ 3.45
KHDRBS1-204ENST00000492989 SYNJ1O43426 1573 aa36.62■■■■□ 3.45
KHDRBS1-204ENST00000492989 CHMP7Q8WUX9 453 aaPredicted RBP36.61■■■■□ 3.45
KHDRBS1-204ENST00000492989 GRIN2BQ13224 1484 aa36.58■■■■□ 3.45
KHDRBS1-204ENST00000492989 SYNJ2O15056 1496 aa36.53■■■■□ 3.44
KHDRBS1-204ENST00000492989 PBRM1Q86U86 1689 aa36.47■■■■□ 3.43
KHDRBS1-204ENST00000492989 GAPVD1Q14C86 1478 aa36.4■■■■□ 3.42
KHDRBS1-204ENST00000492989 ABCA5Q8WWZ7 1642 aa36.32■■■■□ 3.4
KHDRBS1-204ENST00000492989 ABCA10Q8WWZ4 1543 aa36.3■■■■□ 3.4
KHDRBS1-204ENST00000492989 ERCC6L2Q5T890 1561 aa36.13■■■■□ 3.37
KHDRBS1-204ENST00000492989 GRIN2AQ12879 1464 aa36.12■■■■□ 3.37
KHDRBS1-204ENST00000492989 ADAMTS12P58397 1594 aa36.06■■■■□ 3.36
KHDRBS1-204ENST00000492989 AEBP2Q6ZN18 517 aaPredicted RBP36.05■■■■□ 3.36
KHDRBS1-204ENST00000492989 CEP170Q5SW79 1584 aa36.05■■■■□ 3.36
KHDRBS1-204ENST00000492989 WRNQ14191 1432 aaPredicted RBP eCLIP36.04■■■■□ 3.36
KHDRBS1-204ENST00000492989 NUP160Q12769 1436 aa36.02■■■■□ 3.36
KHDRBS1-204ENST00000492989 BIVM-ERCC5R4GMW8 1640 aa35.97■■■■□ 3.35
KHDRBS1-204ENST00000492989 SHROOM2Q13796 1616 aa35.96■■■■□ 3.35
KHDRBS1-204ENST00000492989 SUPT5HO00267 1087 aaKnown RBP35.95■■■■□ 3.35
KHDRBS1-204ENST00000492989 TOP2BQ02880 1626 aa35.94■■■■□ 3.34
KHDRBS1-204ENST00000492989 FHAD1B1AJZ9 1412 aa35.91■■■■□ 3.34
KHDRBS1-204ENST00000492989 ERICH3Q5RHP9 1530 aa35.83■■■■□ 3.33
KHDRBS1-204ENST00000492989 KIF13AQ9H1H9 1805 aa35.76■■■■□ 3.31
KHDRBS1-204ENST00000492989 PRG4Q92954 1404 aaPredicted RBP35.71■■■■□ 3.31
KHDRBS1-204ENST00000492989 JPH4Q96JJ6 628 aa35.63■■■■□ 3.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms