Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC13.24□□□□□ -0.292e-9■■□□□ 11.8
CSTF2TQ9H0L4 SF1-211ENST00000448404 2778 ntTSL 1 (best)13.23□□□□□ -0.292e-9■■□□□ 11.8
CSTF2TQ9H0L4 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC13.22□□□□□ -0.292e-9■■□□□ 11.8
CSTF2TQ9H0L4 SF1-204ENST00000377390 3470 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.562e-9■■□□□ 11.8
CSTF2TQ9H0L4 PCBP2-221ENST00000551104 681 ntTSL 37.87□□□□□ -1.156e-8■■□□□ 11.8
CSTF2TQ9H0L4 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.251e-8■■□□□ 11.8
CSTF2TQ9H0L4 SAR1A-203ENST00000373239 468 ntTSL 313.2□□□□□ -0.31e-8■■□□□ 11.8
CSTF2TQ9H0L4 SAR1A-205ENST00000373242 5981 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.861e-8■■□□□ 11.8
CSTF2TQ9H0L4 EIPR1-IT1-201ENST00000454977 718 ntTSL 2 BASIC7.44□□□□□ -1.222e-11■■□□□ 11.8
CSTF2TQ9H0L4 AC103702.1-201ENST00000548801 2630 ntBASIC15.94■□□□□ 0.144e-6■■□□□ 11.8
CSTF2TQ9H0L4 FARP1-231ENST00000600648 433 ntTSL 520.42■□□□□ 0.863e-6■■□□□ 11.8
CSTF2TQ9H0L4 SAR1A-202ENST00000373238 3227 ntAPPRIS P1 TSL 2 BASIC7.93□□□□□ -1.141e-10■■□□□ 11.8
CSTF2TQ9H0L4 ZNF316-203ENST00000614588 939 ntTSL 320.03■□□□□ 0.83e-7■■□□□ 11.8
CSTF2TQ9H0L4 SPTBN1-203ENST00000389980 2164 ntTSL 1 (best)10.92□□□□□ -0.662e-8■■□□□ 11.7
CSTF2TQ9H0L4 FNDC3B-212ENST00000494000 2600 ntTSL 1 (best)5.94□□□□□ -1.465e-8■■□□□ 11.7
CSTF2TQ9H0L4 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.7■□□□□ 0.421e-9■■□□□ 11.7
CSTF2TQ9H0L4 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC12.82□□□□□ -0.362e-9■■□□□ 11.7
CSTF2TQ9H0L4 HLF-204ENST00000572002 1251 ntTSL 311.78□□□□□ -0.524e-8■■□□□ 11.7
CSTF2TQ9H0L4 HLF-203ENST00000570962 1310 ntTSL 210.77□□□□□ -0.694e-8■■□□□ 11.7
CSTF2TQ9H0L4 HLF-207ENST00000573422 493 ntTSL 410.65□□□□□ -0.74e-8■■□□□ 11.7
CSTF2TQ9H0L4 HLF-208ENST00000573945 2977 ntTSL 5 BASIC8.45□□□□□ -1.064e-8■■□□□ 11.7
CSTF2TQ9H0L4 HLF-206ENST00000573020 414 ntTSL 47.58□□□□□ -1.24e-8■■□□□ 11.7
CSTF2TQ9H0L4 HLF-210ENST00000575345 3589 ntTSL 2 BASIC7.4□□□□□ -1.234e-8■■□□□ 11.7
CSTF2TQ9H0L4 HLF-211ENST00000575868 558 ntTSL 46.33□□□□□ -1.44e-8■■□□□ 11.7
CSTF2TQ9H0L4 PLEKHA6-204ENST00000564627 275 ntTSL 313.07□□□□□ -0.326e-7■■□□□ 11.7
CSTF2TQ9H0L4 HERC4-212ENST00000505760 578 ntTSL 423.4■■□□□ 1.343e-8■■□□□ 11.7
CSTF2TQ9H0L4 HERC4-214ENST00000513996 944 ntTSL 38.17□□□□□ -1.12e-7■■□□□ 11.7
CSTF2TQ9H0L4 HERC4-203ENST00000395185 625 ntTSL 47.84□□□□□ -1.152e-7■■□□□ 11.7
CSTF2TQ9H0L4 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.272e-7■■□□□ 11.7
CSTF2TQ9H0L4 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC6.38□□□□□ -1.392e-7■■□□□ 11.7
CSTF2TQ9H0L4 HERC4-209ENST00000473533 3593 ntTSL 1 (best)5.8□□□□□ -1.482e-7■■□□□ 11.7
CSTF2TQ9H0L4 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.3□□□□□ -1.562e-7■■□□□ 11.7
CSTF2TQ9H0L4 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.18□□□□□ -1.742e-7■■□□□ 11.7
CSTF2TQ9H0L4 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.47■□□□□ 0.072e-6■■□□□ 11.7
CSTF2TQ9H0L4 TCF12-222ENST00000561152 675 ntTSL 524.01■■□□□ 1.432e-6■■□□□ 11.7
CSTF2TQ9H0L4 TCF12-208ENST00000557947 575 ntTSL 420.53■□□□□ 0.882e-6■■□□□ 11.7
CSTF2TQ9H0L4 TCF12-210ENST00000558908 553 ntTSL 417.94■□□□□ 0.462e-6■■□□□ 11.7
CSTF2TQ9H0L4 TCF12-215ENST00000560190 1183 ntTSL 1 (best)17.94■□□□□ 0.462e-6■■□□□ 11.7
CSTF2TQ9H0L4 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.252e-6■■□□□ 11.7
CSTF2TQ9H0L4 TCF12-212ENST00000559609 2252 ntTSL 211.72□□□□□ -0.532e-6■■□□□ 11.7
CSTF2TQ9H0L4 TCF12-202ENST00000333725 4719 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.572e-6■■□□□ 11.7
CSTF2TQ9H0L4 TCF12-204ENST00000438423 4786 ntAPPRIS P4 TSL 5 BASIC11.21□□□□□ -0.622e-6■■□□□ 11.7
CSTF2TQ9H0L4 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC7.07□□□□□ -1.282e-6■■□□□ 11.7
CSTF2TQ9H0L4 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.6■□□□□ 0.099e-8■■□□□ 11.7
CSTF2TQ9H0L4 WTAP-202ENST00000358372 3656 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.739e-8■■□□□ 11.7
CSTF2TQ9H0L4 TRMT2A-216ENST00000487668 1040 ntTSL 516.99■□□□□ 0.314e-6■■□□□ 11.7
CSTF2TQ9H0L4 TRMT2A-205ENST00000444256 426 ntTSL 514.89□□□□□ -0.034e-6■■□□□ 11.7
CSTF2TQ9H0L4 TRMT2A-206ENST00000444845 739 ntTSL 314.05□□□□□ -0.164e-6■■□□□ 11.7
CSTF2TQ9H0L4 TRMT2A-215ENST00000487378 654 ntTSL 213.99□□□□□ -0.174e-6■■□□□ 11.7
CSTF2TQ9H0L4 ABCC3-207ENST00000505699 5271 ntTSL 211.74□□□□□ -0.539e-7■■□□□ 11.7
CSTF2TQ9H0L4 ABCC3-203ENST00000502426 5326 ntTSL 211.72□□□□□ -0.539e-7■■□□□ 11.7
CSTF2TQ9H0L4 DOCK1-201ENST00000280333 6797 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.982e-6■■□□□ 11.7
CSTF2TQ9H0L4 DOCK1-206ENST00000623213 5761 ntTSL 1 (best) BASIC8.73□□□□□ -1.012e-6■■□□□ 11.7
CSTF2TQ9H0L4 HS6ST1-201ENST00000259241 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.514e-7■■□□□ 11.7
CSTF2TQ9H0L4 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.631e-8■■□□□ 11.7
CSTF2TQ9H0L4 SLC5A6-204ENST00000412471 917 ntTSL 527.22■■□□□ 1.954e-6■■□□□ 11.7
CSTF2TQ9H0L4 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC24.61■■□□□ 1.534e-6■■□□□ 11.7
CSTF2TQ9H0L4 CEP295NL-202ENST00000586713 711 ntAPPRIS P1 TSL 321.27■■□□□ 14e-6■■□□□ 11.7
CSTF2TQ9H0L4 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.464e-6■■□□□ 11.7
CSTF2TQ9H0L4 TSC2-226ENST00000569930 2621 ntTSL 217.71■□□□□ 0.434e-6■■□□□ 11.7
CSTF2TQ9H0L4 FER1L4-203ENST00000426117 551 ntTSL 417.36■□□□□ 0.374e-6■■□□□ 11.7
CSTF2TQ9H0L4 WDR18-209ENST00000591985 1498 ntTSL 517.36■□□□□ 0.374e-6■■□□□ 11.7
CSTF2TQ9H0L4 SPIRE2-210ENST00000569108 2409 ntTSL 1 (best)17.25■□□□□ 0.354e-6■■□□□ 11.7
CSTF2TQ9H0L4 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.314e-6■■□□□ 11.7
CSTF2TQ9H0L4 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.72■□□□□ 0.274e-6■■□□□ 11.7
CSTF2TQ9H0L4 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.36■□□□□ 0.214e-6■■□□□ 11.7
CSTF2TQ9H0L4 FER1L4-210ENST00000615531 5998 ntBASIC15.89■□□□□ 0.134e-6■■□□□ 11.7
CSTF2TQ9H0L4 WDR18-211ENST00000607440 1397 ntTSL 515.67■□□□□ 0.14e-6■■□□□ 11.7
CSTF2TQ9H0L4 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.67■□□□□ 0.14e-6■■□□□ 11.7
CSTF2TQ9H0L4 SLC5A6-208ENST00000430186 599 ntTSL 415.33■□□□□ 0.044e-6■■□□□ 11.7
CSTF2TQ9H0L4 CEP295NL-204ENST00000590267 582 ntTSL 215.25■□□□□ 0.034e-6■■□□□ 11.7
CSTF2TQ9H0L4 CEP295NL-203ENST00000587052 564 ntTSL 415.25■□□□□ 0.034e-6■■□□□ 11.7
CSTF2TQ9H0L4 SLC5A6-207ENST00000428518 570 ntTSL 415.2■□□□□ 0.024e-6■■□□□ 11.7
CSTF2TQ9H0L4 WDR18-201ENST00000251289 1501 ntTSL 515.14■□□□□ 0.014e-6■■□□□ 11.7
CSTF2TQ9H0L4 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.014e-6■■□□□ 11.7
CSTF2TQ9H0L4 TSC2-225ENST00000569110 1687 ntTSL 514.9□□□□□ -0.024e-6■■□□□ 11.7
CSTF2TQ9H0L4 DUXAP10-210ENST00000624585 4667 ntTSL 214.62□□□□□ -0.074e-6■■□□□ 11.7
CSTF2TQ9H0L4 SLC5A6-205ENST00000414408 741 ntTSL 514.47□□□□□ -0.094e-6■■□□□ 11.7
CSTF2TQ9H0L4 WDR18-205ENST00000590354 678 ntTSL 214.13□□□□□ -0.154e-6■■□□□ 11.7
CSTF2TQ9H0L4 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.11□□□□□ -0.314e-6■■□□□ 11.7
CSTF2TQ9H0L4 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC12.99□□□□□ -0.334e-6■■□□□ 11.7
CSTF2TQ9H0L4 SLC5A6-210ENST00000442731 542 ntTSL 412.98□□□□□ -0.334e-6■■□□□ 11.7
CSTF2TQ9H0L4 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC12.75□□□□□ -0.374e-6■■□□□ 11.7
CSTF2TQ9H0L4 STK24-204ENST00000418038 2172 ntTSL 212.67□□□□□ -0.384e-6■■□□□ 11.7
CSTF2TQ9H0L4 TSC2-216ENST00000497886 3248 ntTSL 212.45□□□□□ -0.424e-6■■□□□ 11.7
CSTF2TQ9H0L4 MNT-205ENST00000573384 528 ntTSL 212.16□□□□□ -0.464e-11■■□□□ 11.7
CSTF2TQ9H0L4 SLC5A6-217ENST00000488743 3174 ntTSL 211.79□□□□□ -0.524e-6■■□□□ 11.7
CSTF2TQ9H0L4 SLC5A6-201ENST00000310574 3231 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.564e-6■■□□□ 11.7
CSTF2TQ9H0L4 SLC5A6-211ENST00000445802 871 ntTSL 511.12□□□□□ -0.634e-6■■□□□ 11.7
CSTF2TQ9H0L4 BRD4-203ENST00000371835 4624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.634e-6■■□□□ 11.7
CSTF2TQ9H0L4 DUXAP10-206ENST00000614614 712 ntTSL 3 BASIC10.73□□□□□ -0.694e-6■■□□□ 11.7
CSTF2TQ9H0L4 DUXAP10-207ENST00000616922 642 ntTSL 1 (best)10.47□□□□□ -0.734e-6■■□□□ 11.7
CSTF2TQ9H0L4 DUXAP10-209ENST00000619784 903 ntTSL 310.21□□□□□ -0.774e-6■■□□□ 11.7
CSTF2TQ9H0L4 STK24-202ENST00000376554 3602 ntTSL 510.03□□□□□ -0.84e-6■■□□□ 11.7
CSTF2TQ9H0L4 SLC5A6-209ENST00000432106 725 ntTSL 39.83□□□□□ -0.844e-6■■□□□ 11.7
CSTF2TQ9H0L4 TIMP2-202ENST00000536189 3415 ntTSL 2 BASIC8.64□□□□□ -1.034e-6■■□□□ 11.7
CSTF2TQ9H0L4 DUXAP10-205ENST00000612696 4119 ntTSL 1 (best)7.74□□□□□ -1.174e-6■■□□□ 11.7
CSTF2TQ9H0L4 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.574e-6■■□□□ 11.7
CSTF2TQ9H0L4 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.25□□□□□ -1.574e-6■■□□□ 11.7
CSTF2TQ9H0L4 HS6ST1-203ENST00000469019 559 ntTSL 413.97□□□□□ -0.174e-7■■□□□ 11.7
Retrieved 100 of 19,151 protein–RNA pairs in 221.7 ms