RNA–Protein interactions for RNA: ENST00000494000.1

FNDC3B-212, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 1 (best)

Gene FNDC3B, Length 2,600 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-212ENST00000494000 NISCHQ9Y2I1 1504 aa15.03■□□□□ -0
FNDC3B-212ENST00000494000 CCDC180Q9P1Z9 1646 aa13.21□□□□□ -0.29
FNDC3B-212ENST00000494000 SLC24A1O60721 1099 aa12.71□□□□□ -0.37
FNDC3B-212ENST00000494000 ZCCHC6Q5VYS8 1495 aaKnown RBP12.63□□□□□ -0.39
FNDC3B-212ENST00000494000 DCAF1Q9Y4B6 1507 aa12.54□□□□□ -0.4
FNDC3B-212ENST00000494000 MYO15BQ96JP2 1530 aa12.42□□□□□ -0.42
FNDC3B-212ENST00000494000 ABCC9O60706 1549 aa12.3□□□□□ -0.44
FNDC3B-212ENST00000494000 NACADO15069 1562 aa12.29□□□□□ -0.44
FNDC3B-212ENST00000494000 DCAF8L2P0C7V8 631 aa12.26□□□□□ -0.45
FNDC3B-212ENST00000494000 RB1CC1Q8TDY2 1594 aa12.17□□□□□ -0.46
FNDC3B-212ENST00000494000 AEBP2Q6ZN18 517 aaPredicted RBP12.09□□□□□ -0.47
FNDC3B-212ENST00000494000 SHROOM4Q9ULL8 1493 aa12.06□□□□□ -0.48
FNDC3B-212ENST00000494000 SCRIBQ14160 1630 aa11.98□□□□□ -0.49
FNDC3B-212ENST00000494000 UNC13AQ9UPW8 1703 aa11.83□□□□□ -0.52
FNDC3B-212ENST00000494000 EHMT2Q96KQ7 1210 aa11.82□□□□□ -0.52
FNDC3B-212ENST00000494000 PLPPR3Q6T4P5 718 aa11.81□□□□□ -0.52
FNDC3B-212ENST00000494000 BICRAQ9NZM4 1560 aa11.71□□□□□ -0.54
FNDC3B-212ENST00000494000 BAZ1AQ9NRL2 1556 aaPredicted RBP11.65□□□□□ -0.55
FNDC3B-212ENST00000494000 SUPT5HO00267 1087 aaKnown RBP11.64□□□□□ -0.55
FNDC3B-212ENST00000494000 RSF1Q96T23 1441 aaPredicted RBP11.61□□□□□ -0.55
FNDC3B-212ENST00000494000 CHIC1Q5VXU3 224 aa11.58□□□□□ -0.56
FNDC3B-212ENST00000494000 CECR2Q9BXF3 1484 aa11.58□□□□□ -0.56
FNDC3B-212ENST00000494000 SMARCA4P51532 1647 aa11.55□□□□□ -0.56
FNDC3B-212ENST00000494000 PABPN1Q86U42 306 aaKnown RBP eCLIP11.55□□□□□ -0.56
FNDC3B-212ENST00000494000 MROH2BQ7Z745 1585 aa11.54□□□□□ -0.56
FNDC3B-212ENST00000494000 PRKCSHP14314 528 aaPredicted RBP11.54□□□□□ -0.56
FNDC3B-212ENST00000494000 RTN4Q9NQC3 1192 aaKnown RBP11.53□□□□□ -0.56
FNDC3B-212ENST00000494000 PEG3Q9GZU2 1588 aa11.47□□□□□ -0.57
FNDC3B-212ENST00000494000 DAXXQ9UER7 740 aaPredicted RBP11.46□□□□□ -0.57
FNDC3B-212ENST00000494000 WIZO95785 1651 aa11.45□□□□□ -0.58
FNDC3B-212ENST00000494000 SMARCA2P51531 1590 aa11.43□□□□□ -0.58
FNDC3B-212ENST00000494000 TOP2AP11388 1531 aaKnown RBP11.42□□□□□ -0.58
FNDC3B-212ENST00000494000 EIF4G1Q04637 1599 aaKnown RBP11.38□□□□□ -0.59
FNDC3B-212ENST00000494000 ATAD2BQ9ULI0 1458 aa11.35□□□□□ -0.59
FNDC3B-212ENST00000494000 HMGXB3Q12766 1538 aa11.32□□□□□ -0.6
FNDC3B-212ENST00000494000 NCAPD3P42695 1498 aa11.31□□□□□ -0.6
FNDC3B-212ENST00000494000 BAZ1BQ9UIG0 1483 aaKnown RBP11.3□□□□□ -0.6
FNDC3B-212ENST00000494000 CCDC88BA6NC98 1476 aa11.24□□□□□ -0.61
FNDC3B-212ENST00000494000 CC2D2AQ9P2K1 1620 aa11.19□□□□□ -0.62
FNDC3B-212ENST00000494000 APLP2Q06481 763 aa11.19□□□□□ -0.62
FNDC3B-212ENST00000494000 NCBP3Q53F19 620 aaKnown RBP11.14□□□□□ -0.63
FNDC3B-212ENST00000494000 TRIM41Q8WV44 630 aa11.04□□□□□ -0.64
FNDC3B-212ENST00000494000 PRDM2Q13029 1718 aa11.04□□□□□ -0.64
FNDC3B-212ENST00000494000 CFTRP13569 1480 aa11.03□□□□□ -0.64
FNDC3B-212ENST00000494000 TIMELESSQ9UNS1 1208 aa11.02□□□□□ -0.65
FNDC3B-212ENST00000494000 KCNA4P22459 653 aa10.99□□□□□ -0.65
FNDC3B-212ENST00000494000 CADPSQ9ULU8 1353 aa10.99□□□□□ -0.65
FNDC3B-212ENST00000494000 WRNQ14191 1432 aaPredicted RBP eCLIP10.96□□□□□ -0.65
FNDC3B-212ENST00000494000 LAMC3Q9Y6N6 1575 aa10.95□□□□□ -0.66
FNDC3B-212ENST00000494000 ABCC8Q09428 1581 aa10.93□□□□□ -0.66
FNDC3B-212ENST00000494000 EEA1Q15075 1411 aa10.91□□□□□ -0.66
FNDC3B-212ENST00000494000 BIVM-ERCC5R4GMW8 1640 aa10.9□□□□□ -0.66
FNDC3B-212ENST00000494000 TOP2BQ02880 1626 aa10.9□□□□□ -0.66
FNDC3B-212ENST00000494000 SYNJ1O43426 1573 aa10.87□□□□□ -0.67
FNDC3B-212ENST00000494000 PDS5BQ9NTI5 1447 aa10.86□□□□□ -0.67
FNDC3B-212ENST00000494000 ERICH6Q7L0X2 663 aa10.85□□□□□ -0.67
FNDC3B-212ENST00000494000 MYT1Q01538 1121 aa10.85□□□□□ -0.67
FNDC3B-212ENST00000494000 FANCD2Q9BXW9 1451 aa10.84□□□□□ -0.67
FNDC3B-212ENST00000494000 PELP1Q8IZL8 1130 aaKnown RBP10.82□□□□□ -0.68
FNDC3B-212ENST00000494000 CUX1P39880 1505 aa10.81□□□□□ -0.68
FNDC3B-212ENST00000494000 KLHL34Q8N239 644 aa10.81□□□□□ -0.68
FNDC3B-212ENST00000494000 CEP164Q9UPV0 1460 aa10.81□□□□□ -0.68
FNDC3B-212ENST00000494000 CSRNP3Q8WYN3 585 aa10.8□□□□□ -0.68
FNDC3B-212ENST00000494000 TTBK1Q5TCY1 1321 aaPredicted RBP10.8□□□□□ -0.68
FNDC3B-212ENST00000494000 DNMBPQ6XZF7 1577 aa10.79□□□□□ -0.68
FNDC3B-212ENST00000494000 NESP48681 1621 aa10.77□□□□□ -0.68
FNDC3B-212ENST00000494000 DNAJC5BQ9UF47 199 aa10.77□□□□□ -0.69
FNDC3B-212ENST00000494000 TULP1O00294 542 aaPredicted RBP10.76□□□□□ -0.69
FNDC3B-212ENST00000494000 SOGA1O94964 1423 aa10.73□□□□□ -0.69
FNDC3B-212ENST00000494000 TOPBP1Q92547 1522 aa10.73□□□□□ -0.69
FNDC3B-212ENST00000494000 PLEKHG5O94827 1062 aa10.72□□□□□ -0.69
FNDC3B-212ENST00000494000 KIF27Q86VH2 1401 aa10.72□□□□□ -0.69
FNDC3B-212ENST00000494000 KIF21AQ7Z4S6 1674 aa10.71□□□□□ -0.69
FNDC3B-212ENST00000494000 FAM9AQ8IZU1 332 aaPredicted RBP10.71□□□□□ -0.69
FNDC3B-212ENST00000494000 KIF21BO75037 1637 aa10.71□□□□□ -0.7
FNDC3B-212ENST00000494000 FGD5Q6ZNL6 1462 aa10.71□□□□□ -0.7
FNDC3B-212ENST00000494000 AMER1Q5JTC6 1135 aaPredicted RBP10.71□□□□□ -0.7
FNDC3B-212ENST00000494000 MRC2Q9UBG0 1479 aa10.69□□□□□ -0.7
FNDC3B-212ENST00000494000 URB2Q14146 1524 aaKnown RBP10.68□□□□□ -0.7
FNDC3B-212ENST00000494000 GOLGA3Q08378 1498 aa10.68□□□□□ -0.7
FNDC3B-212ENST00000494000 LOC105371045A0A1W2PR82 267 aa10.68□□□□□ -0.7
FNDC3B-212ENST00000494000 ABCA10Q8WWZ4 1543 aa10.67□□□□□ -0.7
FNDC3B-212ENST00000494000 RUSC2Q8N2Y8 1516 aa10.66□□□□□ -0.7
FNDC3B-212ENST00000494000 POLA1P09884 1462 aaPredicted RBP10.66□□□□□ -0.7
FNDC3B-212ENST00000494000 ERICH3Q5RHP9 1530 aa10.66□□□□□ -0.7
FNDC3B-212ENST00000494000 TNIKQ9UKE5 1360 aa10.65□□□□□ -0.7
FNDC3B-212ENST00000494000 CUX2O14529 1486 aa10.63□□□□□ -0.71
FNDC3B-212ENST00000494000 WDR62O43379 1518 aa10.63□□□□□ -0.71
FNDC3B-212ENST00000494000 WDR97A6NE52 1622 aa10.63□□□□□ -0.71
FNDC3B-212ENST00000494000 ERCC6Q03468 1493 aa10.62□□□□□ -0.71
FNDC3B-212ENST00000494000 PRXQ9BXM0 1461 aa10.62□□□□□ -0.71
FNDC3B-212ENST00000494000 EIF5BO60841 1220 aaKnown RBP10.61□□□□□ -0.71
FNDC3B-212ENST00000494000 ARXQ96QS3 562 aa10.61□□□□□ -0.71
FNDC3B-212ENST00000494000 SENP3Q9H4L4 574 aaPredicted RBP10.6□□□□□ -0.71
FNDC3B-212ENST00000494000 CUL7Q14999 1698 aa10.59□□□□□ -0.71
FNDC3B-212ENST00000494000 IFT140Q96RY7 1462 aa10.58□□□□□ -0.72
FNDC3B-212ENST00000494000 TARBP1Q13395 1621 aaKnown RBP10.57□□□□□ -0.72
FNDC3B-212ENST00000494000 IGF1RP08069 1367 aa10.57□□□□□ -0.72
FNDC3B-212ENST00000494000 THOC2Q8NI27 1593 aaKnown RBP10.57□□□□□ -0.72
FNDC3B-212ENST00000494000 RAD54L2Q9Y4B4 1467 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms