RNA–Protein interactions for RNA: ENST00000551104.5

PCBP2-221, Transcript of poly(rC) binding protein 2, humanhuman

TSL 3

Gene PCBP2, Length 681 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP2-221ENST00000551104 NISCHQ9Y2I1 1504 aa20.72■□□□□ 0.91
PCBP2-221ENST00000551104 CCDC180Q9P1Z9 1646 aa18.42■□□□□ 0.54
PCBP2-221ENST00000551104 ABCC9O60706 1549 aa18.12■□□□□ 0.49
PCBP2-221ENST00000551104 AEBP2Q6ZN18 517 aaPredicted RBP17.68■□□□□ 0.42
PCBP2-221ENST00000551104 RB1CC1Q8TDY2 1594 aa17.36■□□□□ 0.37
PCBP2-221ENST00000551104 NACADO15069 1562 aa17.33■□□□□ 0.37
PCBP2-221ENST00000551104 DCAF8L2P0C7V8 631 aa17.33■□□□□ 0.36
PCBP2-221ENST00000551104 ZCCHC6Q5VYS8 1495 aaKnown RBP17.24■□□□□ 0.35
PCBP2-221ENST00000551104 MYO15BQ96JP2 1530 aa17.21■□□□□ 0.35
PCBP2-221ENST00000551104 DNAJC5BQ9UF47 199 aa17.19■□□□□ 0.34
PCBP2-221ENST00000551104 DCAF1Q9Y4B6 1507 aa17.12■□□□□ 0.33
PCBP2-221ENST00000551104 UNC13AQ9UPW8 1703 aa17.01■□□□□ 0.31
PCBP2-221ENST00000551104 PABPN1Q86U42 306 aaKnown RBP eCLIP16.94■□□□□ 0.3
PCBP2-221ENST00000551104 BICRAQ9NZM4 1560 aa16.9■□□□□ 0.3
PCBP2-221ENST00000551104 SCRIBQ14160 1630 aa16.81■□□□□ 0.28
PCBP2-221ENST00000551104 CHIC1Q5VXU3 224 aa16.81■□□□□ 0.28
PCBP2-221ENST00000551104 SHROOM4Q9ULL8 1493 aa16.64■□□□□ 0.25
PCBP2-221ENST00000551104 EIF4G1Q04637 1599 aaKnown RBP16.43■□□□□ 0.22
PCBP2-221ENST00000551104 CC2D2AQ9P2K1 1620 aa16.38■□□□□ 0.21
PCBP2-221ENST00000551104 CECR2Q9BXF3 1484 aa16.28■□□□□ 0.2
PCBP2-221ENST00000551104 SMARCA4P51532 1647 aa16.08■□□□□ 0.17
PCBP2-221ENST00000551104 DNAJC5Q9H3Z4 198 aa16.04■□□□□ 0.16
PCBP2-221ENST00000551104 BAZ1AQ9NRL2 1556 aaPredicted RBP16.04■□□□□ 0.16
PCBP2-221ENST00000551104 NCAPD3P42695 1498 aa16.03■□□□□ 0.16
PCBP2-221ENST00000551104 ATAD2BQ9ULI0 1458 aa16.03■□□□□ 0.16
PCBP2-221ENST00000551104 MROH2BQ7Z745 1585 aa15.99■□□□□ 0.15
PCBP2-221ENST00000551104 SMARCA2P51531 1590 aa15.96■□□□□ 0.15
PCBP2-221ENST00000551104 PEG3Q9GZU2 1588 aa15.93■□□□□ 0.14
PCBP2-221ENST00000551104 HMGXB3Q12766 1538 aa15.91■□□□□ 0.14
PCBP2-221ENST00000551104 BAZ1BQ9UIG0 1483 aaKnown RBP15.86■□□□□ 0.13
PCBP2-221ENST00000551104 WIZO95785 1651 aa15.8■□□□□ 0.12
PCBP2-221ENST00000551104 RSF1Q96T23 1441 aaPredicted RBP15.78■□□□□ 0.12
PCBP2-221ENST00000551104 NESP48681 1621 aa15.68■□□□□ 0.1
PCBP2-221ENST00000551104 TOP2AP11388 1531 aaKnown RBP15.61■□□□□ 0.09
PCBP2-221ENST00000551104 LAMC3Q9Y6N6 1575 aa15.58■□□□□ 0.08
PCBP2-221ENST00000551104 ERCC6Q03468 1493 aa15.57■□□□□ 0.08
PCBP2-221ENST00000551104 CADPSQ9ULU8 1353 aa15.54■□□□□ 0.08
PCBP2-221ENST00000551104 CUX2O14529 1486 aa15.53■□□□□ 0.08
PCBP2-221ENST00000551104 PDS5BQ9NTI5 1447 aa15.47■□□□□ 0.07
PCBP2-221ENST00000551104 KIF21AQ7Z4S6 1674 aa15.47■□□□□ 0.07
PCBP2-221ENST00000551104 CCDC88BA6NC98 1476 aa15.45■□□□□ 0.06
PCBP2-221ENST00000551104 CFTRP13569 1480 aa15.44■□□□□ 0.06
PCBP2-221ENST00000551104 THOC2Q8NI27 1593 aaKnown RBP15.43■□□□□ 0.06
PCBP2-221ENST00000551104 FANCD2Q9BXW9 1451 aa15.36■□□□□ 0.05
PCBP2-221ENST00000551104 MRC2Q9UBG0 1479 aa15.33■□□□□ 0.05
PCBP2-221ENST00000551104 CEP164Q9UPV0 1460 aa15.33■□□□□ 0.04
PCBP2-221ENST00000551104 SUPT5HO00267 1087 aaKnown RBP15.32■□□□□ 0.04
PCBP2-221ENST00000551104 WDR62O43379 1518 aa15.29■□□□□ 0.04
PCBP2-221ENST00000551104 PRDM2Q13029 1718 aa15.29■□□□□ 0.04
PCBP2-221ENST00000551104 URB2Q14146 1524 aaKnown RBP15.24■□□□□ 0.03
PCBP2-221ENST00000551104 TRIM41Q8WV44 630 aa15.15■□□□□ 0.02
PCBP2-221ENST00000551104 TOPBP1Q92547 1522 aa15.12■□□□□ 0.01
PCBP2-221ENST00000551104 DNMBPQ6XZF7 1577 aa15.08■□□□□ 0
PCBP2-221ENST00000551104 ABCC8Q09428 1581 aa15.07■□□□□ 0
PCBP2-221ENST00000551104 SENP3Q9H4L4 574 aaPredicted RBP15.03■□□□□ -0
PCBP2-221ENST00000551104 IFT140Q96RY7 1462 aa15.01□□□□□ -0.01
PCBP2-221ENST00000551104 ZNF608Q9ULD9 1512 aaPredicted RBP15□□□□□ -0.01
PCBP2-221ENST00000551104 CUX1P39880 1505 aa14.99□□□□□ -0.01
PCBP2-221ENST00000551104 POLA1P09884 1462 aaPredicted RBP14.98□□□□□ -0.01
PCBP2-221ENST00000551104 TARBP1Q13395 1621 aaKnown RBP14.96□□□□□ -0.01
PCBP2-221ENST00000551104 FGD5Q6ZNL6 1462 aa14.95□□□□□ -0.02
PCBP2-221ENST00000551104 RAD54L2Q9Y4B4 1467 aa14.95□□□□□ -0.02
PCBP2-221ENST00000551104 SOGA1O94964 1423 aa14.92□□□□□ -0.02
PCBP2-221ENST00000551104 EIF4G3O43432 1585 aaKnown RBP14.9□□□□□ -0.02
PCBP2-221ENST00000551104 AQRO60306 1485 aaKnown RBP eCLIP14.89□□□□□ -0.036e-7■■■■□ 23.2
PCBP2-221ENST00000551104 PHF23Q9BUL5 403 aaPredicted RBP14.87□□□□□ -0.03
PCBP2-221ENST00000551104 TDRD9Q8NDG6 1382 aaKnown RBP14.86□□□□□ -0.03
PCBP2-221ENST00000551104 WRNQ14191 1432 aaPredicted RBP eCLIP14.85□□□□□ -0.03
PCBP2-221ENST00000551104 SYNJ1O43426 1573 aa14.84□□□□□ -0.03
PCBP2-221ENST00000551104 TOP2BQ02880 1626 aa14.82□□□□□ -0.04
PCBP2-221ENST00000551104 BIVM-ERCC5R4GMW8 1640 aa14.82□□□□□ -0.04
PCBP2-221ENST00000551104 WDR97A6NE52 1622 aa14.81□□□□□ -0.04
PCBP2-221ENST00000551104 OSCARQ8IYS5 282 aa14.81□□□□□ -0.04
PCBP2-221ENST00000551104 ABCA10Q8WWZ4 1543 aa14.78□□□□□ -0.04
PCBP2-221ENST00000551104 CHD1O14646 1710 aa14.74□□□□□ -0.05
PCBP2-221ENST00000551104 GRIN2BQ13224 1484 aa14.74□□□□□ -0.05
PCBP2-221ENST00000551104 GAPVD1Q14C86 1478 aa14.74□□□□□ -0.05
PCBP2-221ENST00000551104 ABCA5Q8WWZ7 1642 aa14.74□□□□□ -0.05
PCBP2-221ENST00000551104 SNAPC4Q5SXM2 1469 aa14.73□□□□□ -0.05
PCBP2-221ENST00000551104 PBRM1Q86U86 1689 aa14.71□□□□□ -0.06
PCBP2-221ENST00000551104 FBLN2P98095 1184 aa14.7□□□□□ -0.06
PCBP2-221ENST00000551104 MAGI1Q96QZ7 1491 aaPredicted RBP14.69□□□□□ -0.06
PCBP2-221ENST00000551104 SYNJ2O15056 1496 aa14.65□□□□□ -0.06
PCBP2-221ENST00000551104 CHMP7Q8WUX9 453 aaPredicted RBP14.65□□□□□ -0.06
PCBP2-221ENST00000551104 RIMBP3CA6NJZ7 1639 aa14.62□□□□□ -0.07
PCBP2-221ENST00000551104 RIMBP3BA6NNM3 1639 aa14.62□□□□□ -0.07
PCBP2-221ENST00000551104 RIMBP3Q9UFD9 1639 aa14.62□□□□□ -0.07
PCBP2-221ENST00000551104 ADAMTS12P58397 1594 aa14.6□□□□□ -0.07
PCBP2-221ENST00000551104 ERICH3Q5RHP9 1530 aa14.59□□□□□ -0.07
PCBP2-221ENST00000551104 ARHGEF11O15085 1522 aa14.58□□□□□ -0.08
PCBP2-221ENST00000551104 CLASP1Q7Z460 1538 aa14.58□□□□□ -0.08
PCBP2-221ENST00000551104 FHAD1B1AJZ9 1412 aa14.56□□□□□ -0.08
PCBP2-221ENST00000551104 GRIN2AQ12879 1464 aa14.56□□□□□ -0.08
PCBP2-221ENST00000551104 KIF27Q86VH2 1401 aa14.53□□□□□ -0.08
PCBP2-221ENST00000551104 IGF1RP08069 1367 aa14.52□□□□□ -0.08
PCBP2-221ENST00000551104 NUP160Q12769 1436 aa14.5□□□□□ -0.09
PCBP2-221ENST00000551104 CEP170Q5SW79 1584 aa14.5□□□□□ -0.09
PCBP2-221ENST00000551104 ARAP1Q96P48 1450 aa14.47□□□□□ -0.09
PCBP2-221ENST00000551104 RUSC2Q8N2Y8 1516 aa14.46□□□□□ -0.1
PCBP2-221ENST00000551104 CYB5RLQ6IPT4 315 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms