RNA–Protein interactions for RNA: ENST00000438423.6

TCF12-204, Transcript of transcription factor 12, humanhuman

APPRIS P4 TSL 5 BASIC

Gene TCF12, Length 4,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF12-204ENST00000438423 NISCHQ9Y2I1 1504 aa21.56■■□□□ 1.04
TCF12-204ENST00000438423 DCAF8L2P0C7V8 631 aa21.24■□□□□ 0.99
TCF12-204ENST00000438423 SUPT5HO00267 1087 aaKnown RBP20.11■□□□□ 0.81
TCF12-204ENST00000438423 SHROOM4Q9ULL8 1493 aa20.02■□□□□ 0.79
TCF12-204ENST00000438423 EHMT2Q96KQ7 1210 aa19.13■□□□□ 0.65
TCF12-204ENST00000438423 FAM9AQ8IZU1 332 aaPredicted RBP18.87■□□□□ 0.61
TCF12-204ENST00000438423 APLP2Q06481 763 aa18.73■□□□□ 0.59
TCF12-204ENST00000438423 TRIM41Q8WV44 630 aa18.72■□□□□ 0.59
TCF12-204ENST00000438423 TTBK1Q5TCY1 1321 aaPredicted RBP18.42■□□□□ 0.54
TCF12-204ENST00000438423 ABCC9O60706 1549 aa18.42■□□□□ 0.54
TCF12-204ENST00000438423 PCGF6Q9BYE7 350 aa18.41■□□□□ 0.54
TCF12-204ENST00000438423 RANGAP1P46060 587 aaPredicted RBP18.41■□□□□ 0.54
TCF12-204ENST00000438423 UBTFP17480 764 aaKnown RBP18.36■□□□□ 0.53
TCF12-204ENST00000438423 ATP1B4Q9UN42 357 aaPredicted RBP18.19■□□□□ 0.5
TCF12-204ENST00000438423 CHIC1Q5VXU3 224 aa18.17■□□□□ 0.5
TCF12-204ENST00000438423 PABPN1Q86U42 306 aaKnown RBP eCLIP18.14■□□□□ 0.5
TCF12-204ENST00000438423 CCER1Q8TC90 406 aaPredicted RBP18.03■□□□□ 0.48
TCF12-204ENST00000438423 ZEB1P37275 1124 aaPredicted RBP18.01■□□□□ 0.47
TCF12-204ENST00000438423 LOC105371045A0A1W2PR82 267 aa17.97■□□□□ 0.47
TCF12-204ENST00000438423 PPARGC1BQ86YN6 1023 aaKnown RBP17.94■□□□□ 0.46
TCF12-204ENST00000438423 ZCCHC6Q5VYS8 1495 aaKnown RBP17.88■□□□□ 0.45
TCF12-204ENST00000438423 TRIM26Q12899 539 aaPredicted RBP17.84■□□□□ 0.45
TCF12-204ENST00000438423 CCDC180Q9P1Z9 1646 aa17.83■□□□□ 0.44
TCF12-204ENST00000438423 PELP1Q8IZL8 1130 aaKnown RBP17.75■□□□□ 0.43
TCF12-204ENST00000438423 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.66■□□□□ 0.42
TCF12-204ENST00000438423 HNRNPUL2Q1KMD3 747 aaKnown RBP17.66■□□□□ 0.42
TCF12-204ENST00000438423 SCRIBQ14160 1630 aa17.65■□□□□ 0.42
TCF12-204ENST00000438423 ITGAEP38570 1179 aa17.61■□□□□ 0.41
TCF12-204ENST00000438423 CENPBP07199 599 aaPredicted RBP17.56■□□□□ 0.4
TCF12-204ENST00000438423 HRCP23327 699 aa17.48■□□□□ 0.39
TCF12-204ENST00000438423 MYT1LQ9UL68 1186 aa17.41■□□□□ 0.38
TCF12-204ENST00000438423 CSRNP3Q8WYN3 585 aa17.38■□□□□ 0.37
TCF12-204ENST00000438423 RB1CC1Q8TDY2 1594 aa17.37■□□□□ 0.37
TCF12-204ENST00000438423 YTHDC1Q96MU7 727 aaKnown RBP17.29■□□□□ 0.36
TCF12-204ENST00000438423 FAM50AQ14320 339 aaKnown RBP17.29■□□□□ 0.36
TCF12-204ENST00000438423 NACADO15069 1562 aa17.28■□□□□ 0.36
TCF12-204ENST00000438423 FBLN2P98095 1184 aa17.27■□□□□ 0.36
TCF12-204ENST00000438423 RSF1Q96T23 1441 aaPredicted RBP17.18■□□□□ 0.34
TCF12-204ENST00000438423 NEFLP07196 543 aa17.16■□□□□ 0.34
TCF12-204ENST00000438423 P3H3Q8IVL6 736 aa17.15■□□□□ 0.34
TCF12-204ENST00000438423 DCAF1Q9Y4B6 1507 aa17.15■□□□□ 0.34
TCF12-204ENST00000438423 POLR3GLQ9BT43 218 aa17.14■□□□□ 0.33
TCF12-204ENST00000438423 TRIM52Q96A61 297 aa17.09■□□□□ 0.33
TCF12-204ENST00000438423 ARID3CA6NKF2 412 aa17■□□□□ 0.31
TCF12-204ENST00000438423 NEUROD1Q13562 356 aa17■□□□□ 0.31
TCF12-204ENST00000438423 DIEXFQ68CQ4 756 aaKnown RBP16.96■□□□□ 0.31
TCF12-204ENST00000438423 CNGB1Q14028 1251 aaPredicted RBP16.94■□□□□ 0.3
TCF12-204ENST00000438423 BAZ1BQ9UIG0 1483 aaKnown RBP16.93■□□□□ 0.3
TCF12-204ENST00000438423 CDK11AQ9UQ88 783 aaPredicted RBP16.93■□□□□ 0.3
TCF12-204ENST00000438423 CECR2Q9BXF3 1484 aa16.9■□□□□ 0.3
TCF12-204ENST00000438423 BAZ1AQ9NRL2 1556 aaPredicted RBP16.9■□□□□ 0.3
TCF12-204ENST00000438423 ERICH6Q7L0X2 663 aa16.89■□□□□ 0.3
TCF12-204ENST00000438423 ZNF777Q9ULD5 760 aaPredicted RBP16.84■□□□□ 0.29
TCF12-204ENST00000438423 WRNQ14191 1432 aaPredicted RBP eCLIP16.83■□□□□ 0.29
TCF12-204ENST00000438423 EEA1Q15075 1411 aa16.81■□□□□ 0.28
TCF12-204ENST00000438423 SLC4A1APQ9BWU0 796 aaKnown RBP16.81■□□□□ 0.28
TCF12-204ENST00000438423 ZNF326Q5BKZ1 582 aaKnown RBP16.8■□□□□ 0.28
TCF12-204ENST00000438423 CLIP1P30622 1438 aa16.76■□□□□ 0.27
TCF12-204ENST00000438423 CHMP7Q8WUX9 453 aaPredicted RBP16.75■□□□□ 0.27
TCF12-204ENST00000438423 MYO15BQ96JP2 1530 aa16.74■□□□□ 0.27
TCF12-204ENST00000438423 ZNF316A6NFI3 1004 aaPredicted RBP16.73■□□□□ 0.27
TCF12-204ENST00000438423 GOLGA3Q08378 1498 aa16.7■□□□□ 0.26
TCF12-204ENST00000438423 MROH2BQ7Z745 1585 aa16.68■□□□□ 0.26
TCF12-204ENST00000438423 KIF27Q86VH2 1401 aa16.67■□□□□ 0.26
TCF12-204ENST00000438423 ANP32CO43423 234 aa16.66■□□□□ 0.26
TCF12-204ENST00000438423 NPM1P06748 294 aaKnown RBP eCLIP16.65■□□□□ 0.26
TCF12-204ENST00000438423 CEP162Q5TB80 1403 aa16.65■□□□□ 0.26
TCF12-204ENST00000438423 MTUS2Q5JR59 1369 aa16.64■□□□□ 0.25
TCF12-204ENST00000438423 TNIKQ9UKE5 1360 aa16.6■□□□□ 0.25
TCF12-204ENST00000438423 CHIC2Q9UKJ5 165 aa16.59■□□□□ 0.25
TCF12-204ENST00000438423 CEP164Q9UPV0 1460 aa16.59■□□□□ 0.25
TCF12-204ENST00000438423 CCDC88BA6NC98 1476 aa16.57■□□□□ 0.24
TCF12-204ENST00000438423 TONSLQ96HA7 1378 aa16.55■□□□□ 0.24
TCF12-204ENST00000438423 SMARCA2P51531 1590 aa16.53■□□□□ 0.24
TCF12-204ENST00000438423 TSPY4P0CV99 314 aa16.53■□□□□ 0.24
TCF12-204ENST00000438423 TSPY10P0CW01 314 aa16.53■□□□□ 0.24
TCF12-204ENST00000438423 ERCC6Q03468 1493 aa16.49■□□□□ 0.23
TCF12-204ENST00000438423 SOGA1O94964 1423 aa16.48■□□□□ 0.23
TCF12-204ENST00000438423 BCANQ96GW7 911 aa16.46■□□□□ 0.23
TCF12-204ENST00000438423 PLEKHD1A6NEE1 506 aa16.46■□□□□ 0.22
TCF12-204ENST00000438423 ESF1Q9H501 851 aaKnown RBP16.45■□□□□ 0.22
TCF12-204ENST00000438423 DAXXQ9UER7 740 aaPredicted RBP16.44■□□□□ 0.22
TCF12-204ENST00000438423 CUX2O14529 1486 aa16.44■□□□□ 0.22
TCF12-204ENST00000438423 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.43■□□□□ 0.221e-7■■□□□ 12.6
TCF12-204ENST00000438423 CARMIL1Q5VZK9 1371 aa16.43■□□□□ 0.22
TCF12-204ENST00000438423 CHGAP10645 457 aaKnown RBP16.41■□□□□ 0.22
TCF12-204ENST00000438423 WIZO95785 1651 aa16.4■□□□□ 0.22
TCF12-204ENST00000438423 TOP2AP11388 1531 aaKnown RBP16.4■□□□□ 0.22
TCF12-204ENST00000438423 KCNH8Q96L42 1107 aa16.39■□□□□ 0.21
TCF12-204ENST00000438423 RRP7BPQ9NSQ0 103 aa16.39■□□□□ 0.21
TCF12-204ENST00000438423 ABCC8Q09428 1581 aa16.38■□□□□ 0.21
TCF12-204ENST00000438423 GTF3C3Q9Y5Q9 886 aa16.36■□□□□ 0.21
TCF12-204ENST00000438423 STAG3Q9UJ98 1225 aa16.36■□□□□ 0.21
TCF12-204ENST00000438423 PDS5BQ9NTI5 1447 aa16.35■□□□□ 0.21
TCF12-204ENST00000438423 ATAD2BQ9ULI0 1458 aa16.35■□□□□ 0.21
TCF12-204ENST00000438423 DDX10Q13206 875 aaKnown RBP16.34■□□□□ 0.21
TCF12-204ENST00000438423 CFDP1Q9UEE9 299 aaPredicted RBP16.33■□□□□ 0.2
TCF12-204ENST00000438423 CLSPNQ9HAW4 1339 aa16.32■□□□□ 0.2
TCF12-204ENST00000438423 PLPPR3Q6T4P5 718 aa16.32■□□□□ 0.2
TCF12-204ENST00000438423 CADPSQ9ULU8 1353 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms