RNA–Protein interactions for RNA: ENST00000505699.5

ABCC3-207, Transcript of ATP binding cassette subfamily C member 3, humanhuman

TSL 2

Gene ABCC3, Length 5,271 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC3-207ENST00000505699 DCAF8L2P0C7V8 631 aa21.05■□□□□ 0.96
ABCC3-207ENST00000505699 NISCHQ9Y2I1 1504 aa20.98■□□□□ 0.95
ABCC3-207ENST00000505699 SUPT5HO00267 1087 aaKnown RBP19.87■□□□□ 0.77
ABCC3-207ENST00000505699 EHMT2Q96KQ7 1210 aa19.38■□□□□ 0.69
ABCC3-207ENST00000505699 PELP1Q8IZL8 1130 aaKnown RBP19.33■□□□□ 0.69
ABCC3-207ENST00000505699 SHROOM4Q9ULL8 1493 aa19.32■□□□□ 0.68
ABCC3-207ENST00000505699 APLP2Q06481 763 aa19.18■□□□□ 0.66
ABCC3-207ENST00000505699 FAM9AQ8IZU1 332 aaPredicted RBP18.94■□□□□ 0.62
ABCC3-207ENST00000505699 TTBK1Q5TCY1 1321 aaPredicted RBP18.74■□□□□ 0.59
ABCC3-207ENST00000505699 PCGF6Q9BYE7 350 aa18.6■□□□□ 0.57
ABCC3-207ENST00000505699 RANGAP1P46060 587 aaPredicted RBP18.56■□□□□ 0.56
ABCC3-207ENST00000505699 ERICH6Q7L0X2 663 aa18.52■□□□□ 0.56
ABCC3-207ENST00000505699 CCER1Q8TC90 406 aaPredicted RBP18.48■□□□□ 0.55
ABCC3-207ENST00000505699 CENPBP07199 599 aaPredicted RBP18.48■□□□□ 0.55
ABCC3-207ENST00000505699 ATP1B4Q9UN42 357 aaPredicted RBP18.47■□□□□ 0.55
ABCC3-207ENST00000505699 TRIM41Q8WV44 630 aa18.38■□□□□ 0.53
ABCC3-207ENST00000505699 ZEB1P37275 1124 aaPredicted RBP18.36■□□□□ 0.53
ABCC3-207ENST00000505699 UBTFP17480 764 aaKnown RBP18.29■□□□□ 0.52
ABCC3-207ENST00000505699 NEFLP07196 543 aa18.21■□□□□ 0.5
ABCC3-207ENST00000505699 YTHDC1Q96MU7 727 aaKnown RBP18.04■□□□□ 0.48
ABCC3-207ENST00000505699 ABCC9O60706 1549 aa17.94■□□□□ 0.46
ABCC3-207ENST00000505699 PPARGC1BQ86YN6 1023 aaKnown RBP17.88■□□□□ 0.45
ABCC3-207ENST00000505699 MYT1LQ9UL68 1186 aa17.88■□□□□ 0.45
ABCC3-207ENST00000505699 CCDC180Q9P1Z9 1646 aa17.87■□□□□ 0.45
ABCC3-207ENST00000505699 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.82■□□□□ 0.44
ABCC3-207ENST00000505699 HNRNPUL2Q1KMD3 747 aaKnown RBP17.82■□□□□ 0.44
ABCC3-207ENST00000505699 POLR3GLQ9BT43 218 aa17.78■□□□□ 0.44
ABCC3-207ENST00000505699 DAXXQ9UER7 740 aaPredicted RBP17.78■□□□□ 0.44
ABCC3-207ENST00000505699 ITGAEP38570 1179 aa17.76■□□□□ 0.43
ABCC3-207ENST00000505699 MYT1Q01538 1121 aa17.74■□□□□ 0.43
ABCC3-207ENST00000505699 TRIM26Q12899 539 aaPredicted RBP17.71■□□□□ 0.42
ABCC3-207ENST00000505699 CNGB1Q14028 1251 aaPredicted RBP17.59■□□□□ 0.41
ABCC3-207ENST00000505699 HRCP23327 699 aa17.53■□□□□ 0.4
ABCC3-207ENST00000505699 CHIC1Q5VXU3 224 aa17.53■□□□□ 0.4
ABCC3-207ENST00000505699 SLC4A1APQ9BWU0 796 aaKnown RBP17.51■□□□□ 0.39
ABCC3-207ENST00000505699 LOC105371045A0A1W2PR82 267 aa17.41■□□□□ 0.38
ABCC3-207ENST00000505699 ZCCHC6Q5VYS8 1495 aaKnown RBP17.41■□□□□ 0.38
ABCC3-207ENST00000505699 CLSPNQ9HAW4 1339 aa17.38■□□□□ 0.37
ABCC3-207ENST00000505699 PABPN1Q86U42 306 aaKnown RBP eCLIP17.38■□□□□ 0.374e-8■■■■■ 30
ABCC3-207ENST00000505699 ZNF316A6NFI3 1004 aaPredicted RBP17.32■□□□□ 0.36
ABCC3-207ENST00000505699 RB1CC1Q8TDY2 1594 aa17.31■□□□□ 0.36
ABCC3-207ENST00000505699 RTL5Q5HYW3 569 aaPredicted RBP17.28■□□□□ 0.36
ABCC3-207ENST00000505699 FAM50AQ14320 339 aaKnown RBP17.26■□□□□ 0.35
ABCC3-207ENST00000505699 TRIM52Q96A61 297 aa17.23■□□□□ 0.35
ABCC3-207ENST00000505699 NACADO15069 1562 aa17.22■□□□□ 0.35
ABCC3-207ENST00000505699 DIEXFQ68CQ4 756 aaKnown RBP17.19■□□□□ 0.34
ABCC3-207ENST00000505699 SCRIBQ14160 1630 aa17.12■□□□□ 0.33
ABCC3-207ENST00000505699 NEUROD1Q13562 356 aa17.11■□□□□ 0.33
ABCC3-207ENST00000505699 ZBTB47Q9UFB7 747 aaPredicted RBP17.08■□□□□ 0.33
ABCC3-207ENST00000505699 ZNF326Q5BKZ1 582 aaKnown RBP17.07■□□□□ 0.32
ABCC3-207ENST00000505699 DCAF1Q9Y4B6 1507 aa17.03■□□□□ 0.32
ABCC3-207ENST00000505699 ANP32CO43423 234 aa17■□□□□ 0.31
ABCC3-207ENST00000505699 FBLN2P98095 1184 aa16.97■□□□□ 0.31
ABCC3-207ENST00000505699 BCANQ96GW7 911 aa16.97■□□□□ 0.31
ABCC3-207ENST00000505699 SLC24A1O60721 1099 aa16.96■□□□□ 0.3
ABCC3-207ENST00000505699 NEFMP07197 916 aa16.91■□□□□ 0.3
ABCC3-207ENST00000505699 CANXP27824 592 aaKnown RBP16.91■□□□□ 0.3
ABCC3-207ENST00000505699 CDK11AQ9UQ88 783 aaPredicted RBP16.91■□□□□ 0.3
ABCC3-207ENST00000505699 BCL11AQ9H165 835 aa16.89■□□□□ 0.29
ABCC3-207ENST00000505699 GTF3C3Q9Y5Q9 886 aa16.81■□□□□ 0.28
ABCC3-207ENST00000505699 MYO15BQ96JP2 1530 aa16.77■□□□□ 0.28
ABCC3-207ENST00000505699 ARID3CA6NKF2 412 aa16.76■□□□□ 0.27
ABCC3-207ENST00000505699 P3H3Q8IVL6 736 aa16.74■□□□□ 0.27
ABCC3-207ENST00000505699 ZNF777Q9ULD5 760 aaPredicted RBP16.72■□□□□ 0.27
ABCC3-207ENST00000505699 ESF1Q9H501 851 aaKnown RBP16.68■□□□□ 0.26
ABCC3-207ENST00000505699 ANP32AP39687 249 aaKnown RBP16.66■□□□□ 0.26
ABCC3-207ENST00000505699 CSRNP3Q8WYN3 585 aa16.62■□□□□ 0.25
ABCC3-207ENST00000505699 STAG3Q9UJ98 1225 aa16.59■□□□□ 0.25
ABCC3-207ENST00000505699 NPM2Q86SE8 214 aaKnown RBP16.58■□□□□ 0.24
ABCC3-207ENST00000505699 CHGAP10645 457 aaKnown RBP16.58■□□□□ 0.24
ABCC3-207ENST00000505699 BAZ1AQ9NRL2 1556 aaPredicted RBP16.57■□□□□ 0.24
ABCC3-207ENST00000505699 HSP90AA1P07900 732 aaKnown RBP16.54■□□□□ 0.24
ABCC3-207ENST00000505699 BAZ1BQ9UIG0 1483 aaKnown RBP16.54■□□□□ 0.24
ABCC3-207ENST00000505699 ANP32BQ92688 251 aaKnown RBP16.52■□□□□ 0.24
ABCC3-207ENST00000505699 TONSLQ96HA7 1378 aa16.49■□□□□ 0.23
ABCC3-207ENST00000505699 ACIN1Q9UKV3 1341 aaKnown RBP16.49■□□□□ 0.23
ABCC3-207ENST00000505699 UPF2Q9HAU5 1272 aaKnown RBP16.48■□□□□ 0.23
ABCC3-207ENST00000505699 NPM1P06748 294 aaKnown RBP eCLIP16.48■□□□□ 0.23
ABCC3-207ENST00000505699 PLPPR3Q6T4P5 718 aa16.48■□□□□ 0.23
ABCC3-207ENST00000505699 RSF1Q96T23 1441 aaPredicted RBP16.45■□□□□ 0.22
ABCC3-207ENST00000505699 HNRNPUQ00839 825 aaKnown RBP eCLIP16.44■□□□□ 0.226e-7■■■□□ 18.3
ABCC3-207ENST00000505699 FKBP8Q14318 412 aa16.42■□□□□ 0.22
ABCC3-207ENST00000505699 FAM9BQ8IZU0 186 aa16.41■□□□□ 0.22
ABCC3-207ENST00000505699 SALL2Q9Y467 1007 aaPredicted RBP16.39■□□□□ 0.22
ABCC3-207ENST00000505699 DDX10Q13206 875 aaKnown RBP16.37■□□□□ 0.21
ABCC3-207ENST00000505699 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.36■□□□□ 0.21
ABCC3-207ENST00000505699 SMARCA2P51531 1590 aa16.36■□□□□ 0.21
ABCC3-207ENST00000505699 TMC1Q8TDI8 760 aa16.36■□□□□ 0.21
ABCC3-207ENST00000505699 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.36■□□□□ 0.21
ABCC3-207ENST00000505699 EIF5BO60841 1220 aaKnown RBP16.34■□□□□ 0.21
ABCC3-207ENST00000505699 CHIC2Q9UKJ5 165 aa16.32■□□□□ 0.2
ABCC3-207ENST00000505699 WDR43Q15061 677 aaKnown RBP eCLIP16.31■□□□□ 0.2
ABCC3-207ENST00000505699 CCDC136Q96JN2 1154 aa16.3■□□□□ 0.2
ABCC3-207ENST00000505699 TSPY4P0CV99 314 aa16.3■□□□□ 0.2
ABCC3-207ENST00000505699 TSPY10P0CW01 314 aa16.3■□□□□ 0.2
ABCC3-207ENST00000505699 EEA1Q15075 1411 aa16.3■□□□□ 0.2
ABCC3-207ENST00000505699 KDM2AQ9Y2K7 1162 aa16.25■□□□□ 0.19
ABCC3-207ENST00000505699 SCAF1Q9H7N4 1312 aaKnown RBP16.25■□□□□ 0.19
ABCC3-207ENST00000505699 ERCC6Q03468 1493 aa16.23■□□□□ 0.19
ABCC3-207ENST00000505699 MRS2Q9HD23 443 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms