RNA–Protein interactions for RNA: ENST00000487668.5

TRMT2A-216, Transcript of tRNA methyltransferase 2 homolog A, humanhuman

TSL 5

Gene TRMT2A, Length 1,040 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT2A-216ENST00000487668 NISCHQ9Y2I1 1504 aa44.58■■■■■ 4.73
TRMT2A-216ENST00000487668 CCDC180Q9P1Z9 1646 aa39.65■■■■□ 3.94
TRMT2A-216ENST00000487668 ABCC9O60706 1549 aa38.8■■■■□ 3.8
TRMT2A-216ENST00000487668 RB1CC1Q8TDY2 1594 aa37.3■■■■□ 3.56
TRMT2A-216ENST00000487668 NACADO15069 1562 aa37.27■■■■□ 3.56
TRMT2A-216ENST00000487668 DCAF8L2P0C7V8 631 aa37.18■■■■□ 3.54
TRMT2A-216ENST00000487668 ZCCHC6Q5VYS8 1495 aaKnown RBP37.13■■■■□ 3.53
TRMT2A-216ENST00000487668 MYO15BQ96JP2 1530 aa37.04■■■■□ 3.52
TRMT2A-216ENST00000487668 DCAF1Q9Y4B6 1507 aa36.89■■■■□ 3.5
TRMT2A-216ENST00000487668 UNC13AQ9UPW8 1703 aa36.61■■■■□ 3.45
TRMT2A-216ENST00000487668 BICRAQ9NZM4 1560 aa36.27■■■■□ 3.4
TRMT2A-216ENST00000487668 PABPN1Q86U42 306 aaKnown RBP eCLIP36.25■■■■□ 3.397e-7■■■■□ 25.6
TRMT2A-216ENST00000487668 SCRIBQ14160 1630 aa36.16■■■■□ 3.38
TRMT2A-216ENST00000487668 SHROOM4Q9ULL8 1493 aa35.78■■■■□ 3.32
TRMT2A-216ENST00000487668 DNAJC5BQ9UF47 199 aa35.71■■■■□ 3.31
TRMT2A-216ENST00000487668 EIF4G1Q04637 1599 aaKnown RBP35.25■■■■□ 3.23
TRMT2A-216ENST00000487668 CC2D2AQ9P2K1 1620 aa35.14■■■■□ 3.22
TRMT2A-216ENST00000487668 CECR2Q9BXF3 1484 aa34.86■■■■□ 3.17
TRMT2A-216ENST00000487668 SMARCA4P51532 1647 aa34.61■■■■□ 3.13
TRMT2A-216ENST00000487668 BAZ1AQ9NRL2 1556 aaPredicted RBP34.53■■■■□ 3.12
TRMT2A-216ENST00000487668 ATAD2BQ9ULI0 1458 aa34.41■■■■□ 3.1
TRMT2A-216ENST00000487668 NCAPD3P42695 1498 aa34.4■■■■□ 3.1
TRMT2A-216ENST00000487668 MROH2BQ7Z745 1585 aa34.37■■■■□ 3.09
TRMT2A-216ENST00000487668 SMARCA2P51531 1590 aa34.34■■■■□ 3.09
TRMT2A-216ENST00000487668 PEG3Q9GZU2 1588 aa34.28■■■■□ 3.08
TRMT2A-216ENST00000487668 HMGXB3Q12766 1538 aa34.22■■■■□ 3.07
TRMT2A-216ENST00000487668 BAZ1BQ9UIG0 1483 aaKnown RBP34.09■■■■□ 3.05
TRMT2A-216ENST00000487668 WIZO95785 1651 aa34.03■■■■□ 3.04
TRMT2A-216ENST00000487668 RSF1Q96T23 1441 aaPredicted RBP33.96■■■■□ 3.03
TRMT2A-216ENST00000487668 NESP48681 1621 aa33.61■■■□□ 2.97
TRMT2A-216ENST00000487668 TOP2AP11388 1531 aaKnown RBP33.6■■■□□ 2.97
TRMT2A-216ENST00000487668 LAMC3Q9Y6N6 1575 aa33.48■■■□□ 2.95
TRMT2A-216ENST00000487668 ERCC6Q03468 1493 aa33.39■■■□□ 2.94
TRMT2A-216ENST00000487668 CADPSQ9ULU8 1353 aa33.37■■■□□ 2.93
TRMT2A-216ENST00000487668 KIF21AQ7Z4S6 1674 aa33.24■■■□□ 2.91
TRMT2A-216ENST00000487668 CCDC88BA6NC98 1476 aa33.23■■■□□ 2.91
TRMT2A-216ENST00000487668 PDS5BQ9NTI5 1447 aa33.22■■■□□ 2.91
TRMT2A-216ENST00000487668 CFTRP13569 1480 aa33.19■■■□□ 2.9
TRMT2A-216ENST00000487668 THOC2Q8NI27 1593 aaKnown RBP33.11■■■□□ 2.89
TRMT2A-216ENST00000487668 CUX2O14529 1486 aa33.08■■■□□ 2.89
TRMT2A-216ENST00000487668 SUPT5HO00267 1087 aaKnown RBP33.02■■■□□ 2.88
TRMT2A-216ENST00000487668 PRDM2Q13029 1718 aa33.01■■■□□ 2.87
TRMT2A-216ENST00000487668 FANCD2Q9BXW9 1451 aa32.99■■■□□ 2.87
TRMT2A-216ENST00000487668 CEP164Q9UPV0 1460 aa32.93■■■□□ 2.86
TRMT2A-216ENST00000487668 MRC2Q9UBG0 1479 aa32.9■■■□□ 2.86
TRMT2A-216ENST00000487668 WDR62O43379 1518 aa32.82■■■□□ 2.85
TRMT2A-216ENST00000487668 URB2Q14146 1524 aaKnown RBP32.7■■■□□ 2.83
TRMT2A-216ENST00000487668 TOPBP1Q92547 1522 aa32.48■■■□□ 2.79
TRMT2A-216ENST00000487668 ABCC8Q09428 1581 aa32.43■■■□□ 2.78
TRMT2A-216ENST00000487668 DNMBPQ6XZF7 1577 aa32.43■■■□□ 2.78
TRMT2A-216ENST00000487668 CUX1P39880 1505 aa32.25■■■□□ 2.75
TRMT2A-216ENST00000487668 IFT140Q96RY7 1462 aa32.24■■■□□ 2.75
TRMT2A-216ENST00000487668 POLA1P09884 1462 aaPredicted RBP32.21■■■□□ 2.75
TRMT2A-216ENST00000487668 TARBP1Q13395 1621 aaKnown RBP32.17■■■□□ 2.74
TRMT2A-216ENST00000487668 ZNF608Q9ULD9 1512 aaPredicted RBP32.16■■■□□ 2.74
TRMT2A-216ENST00000487668 DNAJC5Q9H3Z4 198 aa32.14■■■□□ 2.74
TRMT2A-216ENST00000487668 FGD5Q6ZNL6 1462 aa32.11■■■□□ 2.73
TRMT2A-216ENST00000487668 RAD54L2Q9Y4B4 1467 aa32.07■■■□□ 2.72
TRMT2A-216ENST00000487668 SOGA1O94964 1423 aa32.04■■■□□ 2.72
TRMT2A-216ENST00000487668 EIF4G3O43432 1585 aaKnown RBP32.02■■■□□ 2.72
TRMT2A-216ENST00000487668 WRNQ14191 1432 aaPredicted RBP eCLIP31.98■■■□□ 2.71
TRMT2A-216ENST00000487668 BIVM-ERCC5R4GMW8 1640 aa31.97■■■□□ 2.71
TRMT2A-216ENST00000487668 SYNJ1O43426 1573 aa31.96■■■□□ 2.71
TRMT2A-216ENST00000487668 TOP2BQ02880 1626 aa31.96■■■□□ 2.71
TRMT2A-216ENST00000487668 AQRO60306 1485 aaKnown RBP eCLIP31.96■■■□□ 2.713e-7■■■□□ 15.2
TRMT2A-216ENST00000487668 WDR97A6NE52 1622 aa31.91■■■□□ 2.7
TRMT2A-216ENST00000487668 TDRD9Q8NDG6 1382 aaKnown RBP31.88■■■□□ 2.69
TRMT2A-216ENST00000487668 ABCA10Q8WWZ4 1543 aa31.8■■■□□ 2.68
TRMT2A-216ENST00000487668 ABCA5Q8WWZ7 1642 aa31.71■■■□□ 2.67
TRMT2A-216ENST00000487668 OSCARQ8IYS5 282 aa31.7■■■□□ 2.67
TRMT2A-216ENST00000487668 GAPVD1Q14C86 1478 aa31.68■■■□□ 2.66
TRMT2A-216ENST00000487668 PBRM1Q86U86 1689 aa31.67■■■□□ 2.66
TRMT2A-216ENST00000487668 CHD1O14646 1710 aa31.66■■■□□ 2.66
TRMT2A-216ENST00000487668 GRIN2BQ13224 1484 aa31.66■■■□□ 2.66
TRMT2A-216ENST00000487668 SNAPC4Q5SXM2 1469 aa31.64■■■□□ 2.66
TRMT2A-216ENST00000487668 MAGI1Q96QZ7 1491 aaPredicted RBP31.59■■■□□ 2.65
TRMT2A-216ENST00000487668 FBLN2P98095 1184 aa31.51■■■□□ 2.63
TRMT2A-216ENST00000487668 SYNJ2O15056 1496 aa31.47■■■□□ 2.63
TRMT2A-216ENST00000487668 CHMP7Q8WUX9 453 aaPredicted RBP31.42■■■□□ 2.62
TRMT2A-216ENST00000487668 ERICH3Q5RHP9 1530 aa31.42■■■□□ 2.62
TRMT2A-216ENST00000487668 ADAMTS12P58397 1594 aa31.39■■■□□ 2.61
TRMT2A-216ENST00000487668 FHAD1B1AJZ9 1412 aa31.3■■■□□ 2.6
TRMT2A-216ENST00000487668 CLASP1Q7Z460 1538 aa31.29■■■□□ 2.6
TRMT2A-216ENST00000487668 KIF27Q86VH2 1401 aa31.29■■■□□ 2.6
TRMT2A-216ENST00000487668 GRIN2AQ12879 1464 aa31.27■■■□□ 2.6
TRMT2A-216ENST00000487668 RIMBP3CA6NJZ7 1639 aa31.25■■■□□ 2.59
TRMT2A-216ENST00000487668 RIMBP3BA6NNM3 1639 aa31.25■■■□□ 2.59
TRMT2A-216ENST00000487668 RIMBP3Q9UFD9 1639 aa31.25■■■□□ 2.59
TRMT2A-216ENST00000487668 IGF1RP08069 1367 aa31.23■■■□□ 2.59
TRMT2A-216ENST00000487668 ARHGEF11O15085 1522 aa31.23■■■□□ 2.59
TRMT2A-216ENST00000487668 TRIM41Q8WV44 630 aa31.17■■■□□ 2.58
TRMT2A-216ENST00000487668 CEP170Q5SW79 1584 aa31.16■■■□□ 2.58
TRMT2A-216ENST00000487668 NUP160Q12769 1436 aa31.15■■■□□ 2.58
TRMT2A-216ENST00000487668 CUL7Q14999 1698 aa31.13■■■□□ 2.57
TRMT2A-216ENST00000487668 RUSC2Q8N2Y8 1516 aa31.09■■■□□ 2.57
TRMT2A-216ENST00000487668 CARMIL1Q5VZK9 1371 aa31.01■■■□□ 2.55
TRMT2A-216ENST00000487668 ARAP1Q96P48 1450 aa30.98■■■□□ 2.55
TRMT2A-216ENST00000487668 SHROOM2Q13796 1616 aa30.95■■■□□ 2.55
TRMT2A-216ENST00000487668 CYB5RLQ6IPT4 315 aa30.91■■■□□ 2.54
TRMT2A-216ENST00000487668 ERCC6L2Q5T890 1561 aa30.88■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms