RNA–Protein interactions for RNA: ENST00000488743.6

SLC5A6-217, Transcript of solute carrier family 5 member 6, humanhuman

TSL 2

Gene SLC5A6, Length 3,174 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC5A6-217ENST00000488743 NISCHQ9Y2I1 1504 aa23.04■■□□□ 1.28
SLC5A6-217ENST00000488743 PELP1Q8IZL8 1130 aaKnown RBP20.66■□□□□ 0.9
SLC5A6-217ENST00000488743 MYT1Q01538 1121 aa20.09■□□□□ 0.81
SLC5A6-217ENST00000488743 DCAF8L2P0C7V8 631 aa20.04■□□□□ 0.8
SLC5A6-217ENST00000488743 HRCP23327 699 aa20.01■□□□□ 0.79
SLC5A6-217ENST00000488743 ABCC9O60706 1549 aa19.98■□□□□ 0.79
SLC5A6-217ENST00000488743 CCDC180Q9P1Z9 1646 aa19.9■□□□□ 0.78
SLC5A6-217ENST00000488743 PPARGC1BQ86YN6 1023 aaKnown RBP19.77■□□□□ 0.76
SLC5A6-217ENST00000488743 SCAF1Q9H7N4 1312 aaKnown RBP19.53■□□□□ 0.72
SLC5A6-217ENST00000488743 SHROOM4Q9ULL8 1493 aa19.39■□□□□ 0.69
SLC5A6-217ENST00000488743 PCGF6Q9BYE7 350 aa19.34■□□□□ 0.69
SLC5A6-217ENST00000488743 ZCCHC6Q5VYS8 1495 aaKnown RBP19.18■□□□□ 0.66
SLC5A6-217ENST00000488743 SUPT5HO00267 1087 aaKnown RBP19.09■□□□□ 0.65
SLC5A6-217ENST00000488743 TTBK1Q5TCY1 1321 aaPredicted RBP19.06■□□□□ 0.64
SLC5A6-217ENST00000488743 PABPN1Q86U42 306 aaKnown RBP eCLIP19.02■□□□□ 0.64
SLC5A6-217ENST00000488743 BCL11AQ9H165 835 aa18.88■□□□□ 0.61
SLC5A6-217ENST00000488743 PRKCSHP14314 528 aaPredicted RBP18.87■□□□□ 0.61
SLC5A6-217ENST00000488743 RB1CC1Q8TDY2 1594 aa18.85■□□□□ 0.61
SLC5A6-217ENST00000488743 NACADO15069 1562 aa18.83■□□□□ 0.61
SLC5A6-217ENST00000488743 SCRIBQ14160 1630 aa18.78■□□□□ 0.6
SLC5A6-217ENST00000488743 GTF3C3Q9Y5Q9 886 aa18.74■□□□□ 0.59
SLC5A6-217ENST00000488743 ACIN1Q9UKV3 1341 aaKnown RBP18.72■□□□□ 0.59
SLC5A6-217ENST00000488743 DCAF1Q9Y4B6 1507 aa18.71■□□□□ 0.59
SLC5A6-217ENST00000488743 FAM9AQ8IZU1 332 aaPredicted RBP18.71■□□□□ 0.58
SLC5A6-217ENST00000488743 NEUROD1Q13562 356 aa18.69■□□□□ 0.58
SLC5A6-217ENST00000488743 MYO15BQ96JP2 1530 aa18.6■□□□□ 0.57
SLC5A6-217ENST00000488743 CENPBP07199 599 aaPredicted RBP18.6■□□□□ 0.57
SLC5A6-217ENST00000488743 CHIC1Q5VXU3 224 aa18.56■□□□□ 0.56
SLC5A6-217ENST00000488743 ZEB1P37275 1124 aaPredicted RBP18.42■□□□□ 0.54
SLC5A6-217ENST00000488743 UNC13AQ9UPW8 1703 aa18.41■□□□□ 0.54
SLC5A6-217ENST00000488743 BICRAQ9NZM4 1560 aa18.37■□□□□ 0.53
SLC5A6-217ENST00000488743 ERICH6Q7L0X2 663 aa18.32■□□□□ 0.52
SLC5A6-217ENST00000488743 DNAJC5BQ9UF47 199 aa18.29■□□□□ 0.52
SLC5A6-217ENST00000488743 TRIM26Q12899 539 aaPredicted RBP18.27■□□□□ 0.52
SLC5A6-217ENST00000488743 CECR2Q9BXF3 1484 aa18.22■□□□□ 0.51
SLC5A6-217ENST00000488743 ANP32EQ9BTT0 268 aa18.19■□□□□ 0.5
SLC5A6-217ENST00000488743 CSRNP3Q8WYN3 585 aa18.11■□□□□ 0.49
SLC5A6-217ENST00000488743 APLP2Q06481 763 aa18.09■□□□□ 0.49
SLC5A6-217ENST00000488743 LOC105371045A0A1W2PR82 267 aa18.04■□□□□ 0.48
SLC5A6-217ENST00000488743 YTHDC1Q96MU7 727 aaKnown RBP18■□□□□ 0.47
SLC5A6-217ENST00000488743 DIEXFQ68CQ4 756 aaKnown RBP17.96■□□□□ 0.47
SLC5A6-217ENST00000488743 MROH2BQ7Z745 1585 aa17.94■□□□□ 0.46
SLC5A6-217ENST00000488743 EIF4G1Q04637 1599 aaKnown RBP17.9■□□□□ 0.46
SLC5A6-217ENST00000488743 RSF1Q96T23 1441 aaPredicted RBP17.88■□□□□ 0.45
SLC5A6-217ENST00000488743 CC2D2AQ9P2K1 1620 aa17.79■□□□□ 0.44
SLC5A6-217ENST00000488743 TRIM41Q8WV44 630 aa17.77■□□□□ 0.43
SLC5A6-217ENST00000488743 BAZ1AQ9NRL2 1556 aaPredicted RBP17.75■□□□□ 0.43
SLC5A6-217ENST00000488743 SMARCA4P51532 1647 aa17.74■□□□□ 0.43
SLC5A6-217ENST00000488743 WIZO95785 1651 aa17.73■□□□□ 0.43
SLC5A6-217ENST00000488743 ATAD2BQ9ULI0 1458 aa17.7■□□□□ 0.42
SLC5A6-217ENST00000488743 TSHZ2Q9NRE2 1034 aa17.69■□□□□ 0.42
SLC5A6-217ENST00000488743 ANO8Q9HCE9 1232 aaPredicted RBP17.68■□□□□ 0.42
SLC5A6-217ENST00000488743 BAZ1BQ9UIG0 1483 aaKnown RBP17.6■□□□□ 0.41
SLC5A6-217ENST00000488743 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.59■□□□□ 0.41
SLC5A6-217ENST00000488743 CCER1Q8TC90 406 aaPredicted RBP17.57■□□□□ 0.4
SLC5A6-217ENST00000488743 NCAPD3P42695 1498 aa17.53■□□□□ 0.4
SLC5A6-217ENST00000488743 EHMT2Q96KQ7 1210 aa17.52■□□□□ 0.4
SLC5A6-217ENST00000488743 SUPT16HQ9Y5B9 1047 aaKnown RBP17.51■□□□□ 0.39
SLC5A6-217ENST00000488743 SMARCA2P51531 1590 aa17.49■□□□□ 0.39
SLC5A6-217ENST00000488743 MIER1Q8N108 512 aa17.4■□□□□ 0.38
SLC5A6-217ENST00000488743 CCDC136Q96JN2 1154 aa17.4■□□□□ 0.38
SLC5A6-217ENST00000488743 CCDC88BA6NC98 1476 aa17.39■□□□□ 0.37
SLC5A6-217ENST00000488743 NESP48681 1621 aa17.39■□□□□ 0.37
SLC5A6-217ENST00000488743 PEG3Q9GZU2 1588 aa17.35■□□□□ 0.37
SLC5A6-217ENST00000488743 SALL2Q9Y467 1007 aaPredicted RBP17.35■□□□□ 0.37
SLC5A6-217ENST00000488743 TOP2AP11388 1531 aaKnown RBP17.33■□□□□ 0.36
SLC5A6-217ENST00000488743 ZNF316A6NFI3 1004 aaPredicted RBP17.3■□□□□ 0.36
SLC5A6-217ENST00000488743 HMGXB3Q12766 1538 aa17.29■□□□□ 0.36
SLC5A6-217ENST00000488743 SLC24A1O60721 1099 aa17.26■□□□□ 0.35
SLC5A6-217ENST00000488743 EIF5BO60841 1220 aaKnown RBP17.26■□□□□ 0.35
SLC5A6-217ENST00000488743 UBE2Q2Q8WVN8 375 aa17.26■□□□□ 0.35
SLC5A6-217ENST00000488743 BCANQ96GW7 911 aa17.25■□□□□ 0.35
SLC5A6-217ENST00000488743 RBM19Q9Y4C8 960 aaKnown RBP17.21■□□□□ 0.35
SLC5A6-217ENST00000488743 CLSPNQ9HAW4 1339 aa17.21■□□□□ 0.35
SLC5A6-217ENST00000488743 CADPSQ9ULU8 1353 aa17.2■□□□□ 0.34
SLC5A6-217ENST00000488743 DEKP35659 375 aaKnown RBP17.17■□□□□ 0.34
SLC5A6-217ENST00000488743 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.15■□□□□ 0.34
SLC5A6-217ENST00000488743 MSH5O43196 834 aa17.13■□□□□ 0.33
SLC5A6-217ENST00000488743 ABCC8Q09428 1581 aa17.12■□□□□ 0.33
SLC5A6-217ENST00000488743 ERCC6Q03468 1493 aa17.09■□□□□ 0.33
SLC5A6-217ENST00000488743 CFTRP13569 1480 aa17.05■□□□□ 0.32
SLC5A6-217ENST00000488743 PLEKHG5O94827 1062 aa17.04■□□□□ 0.32
SLC5A6-217ENST00000488743 RTN4Q9NQC3 1192 aaKnown RBP17.01■□□□□ 0.31
SLC5A6-217ENST00000488743 FANCD2Q9BXW9 1451 aa17.01■□□□□ 0.31
SLC5A6-217ENST00000488743 CEP162Q5TB80 1403 aa16.98■□□□□ 0.31
SLC5A6-217ENST00000488743 PKNOX2Q96KN3 472 aa16.98■□□□□ 0.31
SLC5A6-217ENST00000488743 SOGA1O94964 1423 aa16.98■□□□□ 0.31
SLC5A6-217ENST00000488743 PDS5BQ9NTI5 1447 aa16.98■□□□□ 0.31
SLC5A6-217ENST00000488743 WRNQ14191 1432 aaPredicted RBP eCLIP16.96■□□□□ 0.31
SLC5A6-217ENST00000488743 MYT1LQ9UL68 1186 aa16.96■□□□□ 0.31
SLC5A6-217ENST00000488743 FKBP8Q14318 412 aa16.95■□□□□ 0.3
SLC5A6-217ENST00000488743 ERICH6BQ5W0A0 696 aa16.95■□□□□ 0.3
SLC5A6-217ENST00000488743 ITGAEP38570 1179 aa16.94■□□□□ 0.3
SLC5A6-217ENST00000488743 TNIKQ9UKE5 1360 aa16.94■□□□□ 0.3
SLC5A6-217ENST00000488743 UBTFP17480 764 aaKnown RBP16.93■□□□□ 0.3
SLC5A6-217ENST00000488743 EEA1Q15075 1411 aa16.93■□□□□ 0.3
SLC5A6-217ENST00000488743 LAMC3Q9Y6N6 1575 aa16.89■□□□□ 0.29
SLC5A6-217ENST00000488743 IL27Q8NEV9 243 aa16.88■□□□□ 0.29
SLC5A6-217ENST00000488743 RUSC2Q8N2Y8 1516 aa16.88■□□□□ 0.29
SLC5A6-217ENST00000488743 CEP164Q9UPV0 1460 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms